FFCP PHASE1:Hg19::chr1:207101917..207101937,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:207101917..207101937,- | |||
|coexpression_cluster_id=C1029 | |||
|description=CAGE_peak_at_chr1:207101917..207101937,- | |description=CAGE_peak_at_chr1:207101917..207101937,- | ||
|id=chr1:207101917..207101937,- | |id=chr1:207101917..207101937,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0001045;2.66e-18;1!UBERON:0008801;1.22e-17;1!UBERON:0006242;1.22e-17;1!UBERON:0006595;2.70e-08;86 | |||
|ontology_enrichment_disease=DOID:630!1.80e-07!1;DOID:0050177!1.80e-07!1;DOID:0050427!1.80e-07!1;DOID:12603!2.17e-07!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.89e-14!115;UBERON:0003127!3.50e-14!2;UBERON:0001829!1.19e-13!2;UBERON:0001044!3.27e-10!6;UBERON:0003293!3.27e-10!6;UBERON:0003294!3.27e-10!6;UBERON:0010047!3.27e-10!6;UBERON:0000167!3.27e-10!6;UBERON:0000078!1.25e-08!18;UBERON:0001154!4.28e-08!1;UBERON:0001153!4.28e-08!1;UBERON:0004921!4.93e-08!129;UBERON:0004185!4.93e-08!129;UBERON:0001831!8.84e-08!1;UBERON:0001567!8.84e-08!1;UBERON:0008801!8.84e-08!1;UBERON:0000989!9.44e-08!1;UBERON:0008811!9.44e-08!1;UBERON:0006258!9.44e-08!1;UBERON:0005876!9.44e-08!1;UBERON:0004874!9.44e-08!1;UBERON:0002372!1.39e-07!1;UBERON:0001961!1.39e-07!1;UBERON:0001744!1.39e-07!1;UBERON:0001735!1.39e-07!1;UBERON:0001736!1.48e-07!1;UBERON:0006298!1.48e-07!1;UBERON:0000166!2.32e-07!21;UBERON:0001007!3.04e-07!155;UBERON:0001555!3.04e-07!155;UBERON:0007026!3.04e-07!155;UBERON:0001155!3.47e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0003127;6.52e-34;2!UBERON:0000160;3.35e-23;17!UBERON:0004921;1.11e-20;33!UBERON:0001154;2.66e-18;1!UBERON:0001153;2.66e-18;1!UBERON:0009854;2.66e-18;1!UBERON:0005409;3.42e-18;22!UBERON:0001831;1.22e-17;1!UBERON:0001567;1.22e-17;1!UBERON:0001155;2.40e-17;9!UBERON:0000059;2.57e-14;11!UBERON:0002108;2.58e-14;4!UBERON:0001044;5.68e-12;6!UBERON:0003293;5.68e-12;6!UBERON:0003294;5.68e-12;6!UBERON:0010047;5.68e-12;6!UBERON:0003408;5.68e-12;6!UBERON:0000167;5.68e-12;6!UBERON:0001555;6.40e-11;54!UBERON:0003126;1.99e-10;7!UBERON:0001005;1.99e-10;7!UBERON:0000341;1.71e-09;2!UBERON:0001829;1.71e-09;2!UBERON:0004089;1.71e-09;2!UBERON:0002114;7.92e-07;2!UBERON:0002110;9.64e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003127,6.00e-34,2;UBERON:0000160,3.05e-23,17;UBERON:0001154,2.66e-18,1;UBERON:0001153,2.66e-18,1;UBERON:0001045,2.66e-18,1;UBERON:0001831,1.70e-17,1;UBERON:0001567,1.70e-17,1;UBERON:0008801,1.70e-17,1;UBERON:0001155,2.15e-17,9;UBERON:0005409,3.90e-16,25;UBERON:0000059,2.35e-14,11;UBERON:0002108,2.58e-14,4;UBERON:0007023,9.50e-14,114;UBERON:0001044,6.34e-12,6;UBERON:0003293,6.34e-12,6;UBERON:0003294,6.34e-12,6;UBERON:0010047,6.34e-12,6;UBERON:0000167,6.34e-12,6;UBERON:0004921,1.30e-10,118;UBERON:0001007,1.46e-10,145;UBERON:0001555,1.46e-10,145;UBERON:0007026,1.46e-10,145;UBERON:0003126,1.94e-10,7;UBERON:0001005,1.94e-10,7;UBERON:0004119,1.70e-09,160;UBERON:0000925,1.70e-09,160;UBERON:0006595,1.70e-09,160;UBERON:0000341,1.86e-09,2;UBERON:0001829,2.02e-09,2;UBERON:0004089,2.02e-09,2;UBERON:0003408,1.62e-07,10;UBERON:0002114,7.70e-07,2;UBERON:0002110,9.12e-07,3;UBERON:0006242,9.12e-07,3 | |||
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|short_description=p@chr1:207101917..207101937,- | |short_description=p@chr1:207101917..207101937,- | ||
}} | }} |
Latest revision as of 03:01, 28 July 2015
Short description: | p@chr1:207101917..207101937, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:207101917..207101937, - |
Coexpression cluster: | C1029_appendix_colon_submaxillary_small_gall_throat_parotid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
open tracheal system trachea | 6.00e-34 | 2 |
intestine | 3.05e-23 | 17 |
vermiform appendix | 2.66e-18 | 1 |
caecum | 2.66e-18 | 1 |
midgut | 2.66e-18 | 1 |
parotid gland | 1.70e-17 | 1 |
cheek | 1.70e-17 | 1 |
parotid gland primordium | 1.70e-17 | 1 |
colon | 2.15e-17 | 9 |
gastrointestinal system | 3.90e-16 | 25 |
large intestine | 2.35e-14 | 11 |
small intestine | 2.58e-14 | 4 |
adult organism | 9.50e-14 | 114 |
saliva-secreting gland | 6.34e-12 | 6 |
gland of oral region | 6.34e-12 | 6 |
gland of foregut | 6.34e-12 | 6 |
oral gland | 6.34e-12 | 6 |
oral cavity | 6.34e-12 | 6 |
subdivision of digestive tract | 1.30e-10 | 118 |
digestive system | 1.46e-10 | 145 |
digestive tract | 1.46e-10 | 145 |
primitive gut | 1.46e-10 | 145 |
trachea | 1.94e-10 | 7 |
respiratory airway | 1.94e-10 | 7 |
endoderm-derived structure | 1.70e-09 | 160 |
endoderm | 1.70e-09 | 160 |
presumptive endoderm | 1.70e-09 | 160 |
throat | 1.86e-09 | 2 |
major salivary gland | 2.02e-09 | 2 |
midface | 2.02e-09 | 2 |
gland of gut | 1.62e-07 | 10 |
duodenum | 7.70e-07 | 2 |
gallbladder | 9.12e-07 | 3 |
gall bladder primordium | 9.12e-07 | 3 |