FFCP PHASE1:Hg19::chr1:178007024..178007031,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=49bp_to_ENST00000462729_5end | |association_with_transcript=49bp_to_ENST00000462729_5end | ||
|cluster_id=chr1:178007024..178007031,- | |||
|description=CAGE_peak_2_at_ENST00000462729_5end | |description=CAGE_peak_2_at_ENST00000462729_5end | ||
|id=chr1:178007024..178007031,- | |id=chr1:178007024..178007031,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002178;3.27e-23;3!CL:0002188;1.60e-14;5!CL:1000746;8.99e-11;7!CL:1000612;8.99e-11;7!CL:0002681;7.92e-07;12!CL:0002584;7.92e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,2.62e-23,3;CL:0002188,1.83e-14,5;CL:1000746,9.89e-11,7;CL:1000612,9.89e-11,7;CL:0002681,8.38e-07,12;CL:0002584,8.38e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3493;5.04e-34;2!DOID:299;1.09e-11;25 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,5.04e-34,2;DOID:299,1.03e-11,25 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.25e-12!115;UBERON:0005409!1.97e-08!35;UBERON:0002110!2.03e-07!3;UBERON:0006242!2.03e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000945;1.60e-14;5!UBERON:0010039;1.60e-14;5!UBERON:0000074;8.99e-11;7!UBERON:0001229;8.99e-11;7!UBERON:0001225;7.92e-07;12!UBERON:0008987;7.92e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010532,9.89e-11,7;UBERON:0000074,9.89e-11,7;UBERON:0001229,9.89e-11,7;UBERON:0001230,9.89e-11,7;UBERON:0003220,9.89e-11,7;UBERON:0005749,9.89e-11,7;UBERON:0004199,9.89e-11,7;UBERON:0004209,9.89e-11,7;UBERON:0004198,9.89e-11,7;UBERON:0000945,1.24e-09,8;UBERON:0010039,1.24e-09,8;UBERON:0005103,1.47e-09,8;UBERON:0000083,1.47e-09,8;UBERON:0009201,1.47e-09,8;UBERON:0006553,1.47e-09,8;UBERON:0003074,1.47e-09,8;UBERON:0003060,1.47e-09,8;UBERON:0000080,1.21e-08,9;UBERON:0002120,1.21e-08,9;UBERON:0004875,1.21e-08,9;UBERON:0005721,1.21e-08,9;UBERON:0005754,1.21e-08,9;UBERON:0007297,1.21e-08,9;UBERON:0004876,2.63e-07,11;UBERON:0001225,8.38e-07,12;UBERON:0008987,8.38e-07,12;UBERON:0003887,8.38e-07,12 | |||
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| ||
|short_description=p2@ENST00000462729 | |short_description=p2@ENST00000462729 | ||
}} | }} |
Latest revision as of 00:46, 28 July 2015
Short description: | p2@ENST00000462729 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000462729_5end |
Coexpression cluster: | NA |
Association with transcript: | 49bp_to_ENST00000462729_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 2.62e-23 | 3 |
glomerular endothelial cell | 1.83e-14 | 5 |
glomerular cell | 9.89e-11 | 7 |
kidney corpuscule cell | 9.89e-11 | 7 |
kidney cortical cell | 8.38e-07 | 12 |
renal cortical epithelial cell | 8.38e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
primitive nephron | 9.89e-11 | 7 |
renal glomerulus | 9.89e-11 | 7 |
renal corpuscle | 9.89e-11 | 7 |
glomerular capsule | 9.89e-11 | 7 |
metanephric mesenchyme | 9.89e-11 | 7 |
glomerular tuft | 9.89e-11 | 7 |
S-shaped body | 9.89e-11 | 7 |
renal vesicle | 9.89e-11 | 7 |
comma-shaped body | 9.89e-11 | 7 |
stomach | 1.24e-09 | 8 |
food storage organ | 1.24e-09 | 8 |
mesonephric epithelium | 1.47e-09 | 8 |
mesonephric tubule | 1.47e-09 | 8 |
nephric duct | 1.47e-09 | 8 |
renal duct | 1.47e-09 | 8 |
mesonephric duct | 1.47e-09 | 8 |
pronephric duct | 1.47e-09 | 8 |
mesonephros | 1.21e-08 | 9 |
pronephros | 1.21e-08 | 9 |
nephrogenic cord | 1.21e-08 | 9 |
pronephric mesoderm | 1.21e-08 | 9 |
rostral part of nephrogenic cord | 1.21e-08 | 9 |
presumptive pronephric mesoderm | 1.21e-08 | 9 |
urogenital ridge | 2.63e-07 | 11 |
cortex of kidney | 8.38e-07 | 12 |
renal parenchyma | 8.38e-07 | 12 |
intraembryonic coelom | 8.38e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 5.04e-34 | 2 |
adenocarcinoma | 1.03e-11 | 25 |