FFCP PHASE1:Hg19::chr1:16076053..16076066,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=324bp_to_ENST00000418525_5end | |association_with_transcript=324bp_to_ENST00000418525_5end | ||
|cluster_id=chr1:16076053..16076066,- | |||
|description=CAGE_peak_3_at_ENST00000418525_5end | |description=CAGE_peak_3_at_ENST00000418525_5end | ||
|id=chr1:16076053..16076066,- | |id=chr1:16076053..16076066,- | ||
|ontology_enrichment_celltype=CL:0002139!1.42e-41!24;CL:0000115!4.09e-39!35;CL:0000071!2.03e-37!18;CL:0002546!2.03e-37!18;CL:0000213!2.32e-30!57;CL:0000215!2.32e-30!57;CL:0002078!3.96e-30!44;CL:1000413!7.15e-23!9;CL:0002543!1.38e-17!6;CL:0000222!2.14e-17!119;CL:0000076!1.08e-13!62;CL:0002618!6.81e-13!3;CL:0002544!6.79e-12!6;CL:0000220!3.15e-11!246;CL:0002321!4.46e-11!248;CL:0002589!3.25e-09!2;CL:0000066!3.12e-08!254 | |ontology_enrichment_celltype=CL:0002139!1.42e-41!24;CL:0000115!4.09e-39!35;CL:0000071!2.03e-37!18;CL:0002546!2.03e-37!18;CL:0000213!2.32e-30!57;CL:0000215!2.32e-30!57;CL:0002078!3.96e-30!44;CL:1000413!7.15e-23!9;CL:0002543!1.38e-17!6;CL:0000222!2.14e-17!119;CL:0000076!1.08e-13!62;CL:0002618!6.81e-13!3;CL:0002544!6.79e-12!6;CL:0000220!3.15e-11!246;CL:0002321!4.46e-11!248;CL:0002589!3.25e-09!2;CL:0000066!3.12e-08!254 | ||
|ontology_enrichment_celltype_v019=CL:1000413;3.26e-42;9!CL:0000071;3.69e-41;18!CL:0000115;6.60e-34;36!CL:0002139;8.23e-31;24!CL:0002544;1.34e-23;6!CL:0002078;1.84e-16;45!CL:0000213;4.21e-14;58!CL:0000215;4.21e-14;58!CL:0002188;4.12e-13;5!CL:0002543;2.24e-11;6!CL:1000746;1.24e-09;7!CL:1000612;1.24e-09;7!CL:0002545;3.43e-09;2!CL:0002589;6.42e-09;2!CL:0000076;1.92e-07;63 | |||
|ontology_enrichment_celltype_v019_2=CL:1000413,3.27e-42,9;CL:0000071,3.70e-41,18;CL:0002546,3.70e-41,18;CL:0000115,1.67e-33,36;CL:0002139,8.25e-31,24;CL:0002078,1.11e-26,45;CL:0002544,1.45e-23,6;CL:0000213,1.50e-20,58;CL:0000215,1.50e-20,58;CL:0002188,4.66e-13,5;CL:0000222,1.08e-11,121;CL:0000076,1.67e-11,63;CL:0002543,2.25e-11,6;CL:1000746,1.35e-09,7;CL:1000612,1.35e-09,7;CL:0002545,3.43e-09,2;CL:0002589,8.09e-09,2 | |||
|ontology_enrichment_development_v019=CL:0002546;3.69e-41;18!UBERON:0000358;7.57e-17;1!UBERON:0005425;1.65e-16;1!UBERON:0006965;6.42e-09;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!2.03e-37!18;UBERON:0004638!2.03e-37!18;UBERON:0004852!2.03e-37!18;UBERON:0000487!4.66e-30!22;UBERON:0000055!1.48e-26!69;UBERON:0006914!4.39e-26!25;UBERON:0001981!3.18e-23!60;UBERON:0007500!3.18e-23!60;UBERON:0004537!3.18e-23!60;UBERON:0006965!3.18e-23!60;UBERON:0003915!7.15e-23!9;UBERON:0004700!7.15e-23!9;UBERON:0001917!7.15e-23!9;UBERON:0002049!1.82e-22!79;UBERON:0007798!1.82e-22!79;UBERON:0003914!1.03e-20!118;UBERON:0004872!1.32e-20!84;UBERON:0004535!1.32e-17!110;UBERON:0001009!5.64e-17!113;UBERON:0001637!5.80e-12!42;UBERON:0003509!5.80e-12!42;UBERON:0004572!5.80e-12!42;UBERON:0001638!1.27e-11!9;UBERON:0003920!1.27e-11!9;UBERON:0004582!1.27e-11!9;UBERON:0000490!2.37e-11!138;UBERON:0000025!6.39e-10!194;UBERON:0001529!3.25e-09!2;UBERON:0007204!3.25e-09!2;UBERON:0004111!4.16e-09!241;UBERON:0003081!2.21e-08!216;UBERON:0000477!5.31e-08!286;UBERON:0002066!6.54e-08!5;UBERON:0000483!1.62e-07!309;UBERON:0000119!2.25e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0003915;3.26e-42;9!UBERON:0004700;3.26e-42;9!UBERON:0001917;3.26e-42;9!UBERON:0004638;3.69e-41;18!UBERON:0001986;3.69e-41;18!UBERON:0004852;3.69e-41;18!UBERON:0000487;1.23e-33;22!UBERON:0006914;1.44e-29;25!UBERON:0000490;4.94e-22;33!UBERON:0001637;3.47e-17;42!UBERON:0003509;3.47e-17;42!UBERON:0004572;3.47e-17;42!UBERON:0000941;1.65e-16;1!UBERON:0001785;1.65e-16;1!UBERON:0002464;1.65e-16;1!UBERON:0004904;1.65e-16;1!UBERON:0001021;1.65e-16;1!UBERON:0000947;5.69e-12;21!UBERON:0010191;5.69e-12;21!UBERON:0007500;9.30e-12;56!UBERON:0001981;9.30e-12;56!UBERON:0004537;9.30e-12;56!UBERON:0004573;1.33e-10;33!UBERON:0004571;1.33e-10;33!UBERON:0003914;3.64e-10;74!UBERON:0000074;1.24e-09;7!UBERON:0001229;1.24e-09;7!UBERON:0000025;2.22e-09;93!UBERON:0005800;3.43e-09;2!UBERON:0001515;3.43e-09;2!UBERON:0003714;6.42e-09;2!UBERON:0005162;6.42e-09;2!UBERON:0000122;6.42e-09;2!UBERON:0001529;6.42e-09;2!UBERON:0007204;6.42e-09;2!UBERON:0002049;3.51e-08;75!UBERON:0007798;3.51e-08;75!UBERON:0001638;7.01e-08;9!UBERON:0003920;7.01e-08;9!UBERON:0004582;7.01e-08;9!UBERON:0000055;6.56e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003915,3.27e-42,9;UBERON:0004700,3.27e-42,9;UBERON:0001917,3.27e-42,9;UBERON:0004638,3.70e-41,18;UBERON:0001986,3.70e-41,18;UBERON:0004852,3.70e-41,18;UBERON:0000487,1.24e-33,22;UBERON:0006914,1.44e-29,25;UBERON:0007500,3.21e-20,59;UBERON:0001981,3.21e-20,59;UBERON:0004537,3.21e-20,59;UBERON:0006965,3.21e-20,59;UBERON:0000055,1.90e-17,68;UBERON:0001637,2.46e-17,42;UBERON:0003509,2.46e-17,42;UBERON:0004572,2.46e-17,42;UBERON:0000941,1.41e-16,1;UBERON:0001785,1.41e-16,1;UBERON:0002464,1.41e-16,1;UBERON:0004904,1.41e-16,1;UBERON:0001021,1.41e-16,1;UBERON:0003902,1.41e-16,1;UBERON:0005425,1.41e-16,1;UBERON:0002049,4.09e-15,78;UBERON:0007798,4.09e-15,78;UBERON:0003914,8.74e-15,117;UBERON:0004872,3.70e-14,83;UBERON:0000947,5.22e-12,21;UBERON:0010191,5.22e-12,21;UBERON:0004573,1.33e-11,33;UBERON:0004571,1.33e-11,33;UBERON:0004535,1.38e-10,109;UBERON:0001009,2.79e-10,112;UBERON:0003081,1.06e-09,203;UBERON:0010532,1.35e-09,7;UBERON:0000074,1.35e-09,7;UBERON:0001229,1.35e-09,7;UBERON:0001230,1.35e-09,7;UBERON:0003220,1.35e-09,7;UBERON:0005749,1.35e-09,7;UBERON:0004199,1.35e-09,7;UBERON:0004209,1.35e-09,7;UBERON:0004198,1.35e-09,7;UBERON:0005800,3.43e-09,2;UBERON:0001515,3.43e-09,2;UBERON:0003714,5.94e-09,2;UBERON:0005162,5.94e-09,2;UBERON:0000122,5.94e-09,2;UBERON:0001529,8.09e-09,2;UBERON:0007204,8.09e-09,2;UBERON:0000025,1.56e-08,192;UBERON:0005103,1.65e-08,8;UBERON:0000083,1.65e-08,8;UBERON:0009201,1.65e-08,8;UBERON:0006553,1.65e-08,8;UBERON:0003074,1.65e-08,8;UBERON:0003060,1.65e-08,8;UBERON:0001638,7.01e-08,9;UBERON:0003920,7.01e-08,9;UBERON:0004582,7.01e-08,9;UBERON:0000080,1.17e-07,9;UBERON:0002120,1.17e-07,9;UBERON:0004875,1.17e-07,9;UBERON:0005721,1.17e-07,9;UBERON:0005754,1.17e-07,9;UBERON:0007297,1.17e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39133685156694,0,1.38856200643038,0.56530794192401,1.67799774483962,0.550236083880135,1.25396979922086,0.258416759169329,0,0,0.402829317109147,0,0,0,5.67099363517232,0.357198913136319,0.22452937262617,0.450445921933289,4.5994991239765,0,4.03043836646896,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0.163461903113459,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0.433099343283221,0,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02056223165909,0.215915916102139,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0.18532421910392,1.14499909393593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0.0787831823072236,0.0824158583811665,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226624183040251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0.438568099157414,0,0,0,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0,0.560659312903067,0,0,0,0,0,0,0,0,0,0,0,2.34640942403454,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39133685156694,0,1.38856200643038,0.56530794192401,1.67799774483962,0.550236083880135,1.25396979922086,0.258416759169329,0,0,0.402829317109147,0,0,0,5.67099363517232,0.357198913136319,0.22452937262617,0.450445921933289,4.5994991239765,0,4.03043836646896,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0.163461903113459,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0.433099343283221,0,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02056223165909,0.215915916102139,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0.18532421910392,1.14499909393593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0.0787831823072236,0.0824158583811665,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226624183040251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0.438568099157414,0,0,0,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0,0.560659312903067,0,0,0,0,0,0,0,0,0,0,0,2.34640942403454,0,0,0,0,0 | ||
|short_description=p3@ENST00000418525 | |short_description=p3@ENST00000418525 | ||
}} | }} |
Latest revision as of 23:26, 27 July 2015
Short description: | p3@ENST00000418525 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ENST00000418525_5end |
Coexpression cluster: | NA |
Association with transcript: | 324bp_to_ENST00000418525_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of artery | 3.27e-42 | 9 |
blood vessel endothelial cell | 3.70e-41 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.70e-41 | 18 |
endothelial cell | 1.67e-33 | 36 |
endothelial cell of vascular tree | 8.25e-31 | 24 |
meso-epithelial cell | 1.11e-26 | 45 |
aortic endothelial cell | 1.45e-23 | 6 |
lining cell | 1.50e-20 | 58 |
barrier cell | 1.50e-20 | 58 |
glomerular endothelial cell | 4.66e-13 | 5 |
mesodermal cell | 1.08e-11 | 121 |
squamous epithelial cell | 1.67e-11 | 63 |
vein endothelial cell | 2.25e-11 | 6 |
glomerular cell | 1.35e-09 | 7 |
kidney corpuscule cell | 1.35e-09 | 7 |
thoracic aorta endothelial cell | 3.43e-09 | 2 |
smooth muscle cell of the brachiocephalic vasculature | 8.09e-09 | 2 |