FFCP PHASE1:Hg19::chr1:1100457..1100470,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:1100457..1100470,+ | |||
|coexpression_cluster_id=C120 | |||
|description=CAGE_peak_at_chr1:1100457..1100470,+ | |||
|id=chr1:1100457..1100470,+ | |||
|ontology_enrichment_celltype=CL:1000497!6.56e-29!18;CL:0002518!6.56e-29!18;CL:1000449!5.10e-24!16;CL:1000507!5.12e-23!12;CL:1000494!5.12e-23!12;CL:0002681!9.46e-17!13;CL:0002584!9.46e-17!13;CL:0000066!3.60e-16!254;CL:0000239!1.08e-09!3;CL:1000615!1.08e-09!3;CL:0002306!1.08e-09!3;CL:0000223!1.15e-09!59;CL:0002076!1.79e-08!43;CL:0002178!8.82e-08!3;CL:0001014!5.18e-07!2;CL:0001016!5.18e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:1000507;4.02e-99;10!CL:1000494;4.02e-99;10!CL:1000497;1.73e-71;17!CL:0002518;1.73e-71;17!CL:1000449;7.33e-66;15!CL:0000239;3.70e-38;3!CL:1000615;3.70e-38;3!CL:0002306;3.70e-38;3!CL:0002681;4.95e-37;12!CL:0002584;4.95e-37;12!CL:0001014;4.93e-26;2!CL:0001016;4.93e-26;2!CL:0000453;5.16e-11;5!CL:0000840;2.50e-09;5!CL:0000650;1.93e-07;2!CL:1000500;1.93e-07;2!CL:1000618;1.93e-07;2!CL:1001318;1.93e-07;2!CL:0002173;1.93e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,4.27e-99,10;CL:1000494,4.27e-99,10;CL:1000497,1.50e-71,17;CL:0002518,1.50e-71,17;CL:1000449,7.63e-66,15;CL:0000239,5.76e-38,3;CL:1000615,5.76e-38,3;CL:0002306,5.76e-38,3;CL:0002681,6.37e-37,12;CL:0002584,6.37e-37,12;CL:0001014,5.96e-26,2;CL:0001016,5.96e-26,2;CL:0000453,5.57e-11,5;CL:0000840,2.66e-09,5;CL:0001029,2.66e-09,5;CL:0000066,6.63e-08,253;CL:0000650,1.87e-07,2;CL:1000500,1.87e-07,2;CL:1000618,1.87e-07,2;CL:1001318,1.87e-07,2;CL:0002173,1.87e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:299!1.17e-14!25;DOID:305!1.81e-11!106;DOID:0050687!2.87e-08!143;DOID:4468!9.59e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:4468;1.36e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,1.28e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0004211!5.10e-24!16;UBERON:0001285!5.10e-24!16;UBERON:0007684!5.10e-24!16;UBERON:0003220!5.10e-24!16;UBERON:0004208!5.10e-24!16;UBERON:0002113!2.34e-23!27;UBERON:0003918!2.34e-23!27;UBERON:0005095!2.34e-23!27;UBERON:0007687!2.34e-23!27;UBERON:0009773!5.12e-23!12;UBERON:0001231!5.12e-23!12;UBERON:0004810!5.12e-23!12;UBERON:0006555!2.04e-22!17;UBERON:0005103!2.04e-22!17;UBERON:0000083!2.04e-22!17;UBERON:0009201!2.04e-22!17;UBERON:0004819!2.04e-22!17;UBERON:0006553!2.04e-22!17;UBERON:0003074!2.04e-22!17;UBERON:0003060!2.04e-22!17;UBERON:0000489!2.37e-21!32;UBERON:0000058!2.61e-21!26;UBERON:0000080!5.40e-21!18;UBERON:0002120!5.40e-21!18;UBERON:0004875!5.40e-21!18;UBERON:0005721!5.40e-21!18;UBERON:0005754!5.40e-21!18;UBERON:0007297!5.40e-21!18;UBERON:0005172!1.28e-18!55;UBERON:0005173!1.28e-18!55;UBERON:0004876!1.41e-18!20;UBERON:0006554!3.60e-18!44;UBERON:0001008!1.20e-17!45;UBERON:0003887!1.53e-17!21;UBERON:0001225!9.46e-17!13;UBERON:0008987!9.46e-17!13;UBERON:0002417!3.49e-16!61;UBERON:0000916!3.49e-16!61;UBERON:0005177!1.68e-13!107;UBERON:0001851!3.14e-13!16;UBERON:0000353!2.48e-12!17;UBERON:0003064!1.03e-11!37;UBERON:0009569!2.44e-10!113;UBERON:0006853!1.08e-09!3;UBERON:0007685!1.08e-09!3;UBERON:0004134!1.08e-09!3;UBERON:0003103!1.20e-09!69;UBERON:0003104!2.04e-09!238;UBERON:0009142!2.04e-09!238;UBERON:0000466!2.62e-09!126;UBERON:0003886!1.59e-08!63;UBERON:0004119!2.51e-08!169;UBERON:0000925!2.51e-08!169;UBERON:0006595!2.51e-08!169;UBERON:0000481!5.85e-08!347;UBERON:0002553!2.89e-07!70;UBERON:0000464!5.44e-07!104 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;4.02e-99;10!UBERON:0009773;4.02e-99;10!UBERON:0001231;4.02e-99;10!UBERON:0004810;4.02e-99;10!UBERON:0006555;7.33e-66;15!UBERON:0004819;7.33e-66;15!UBERON:0001285;7.33e-66;15!UBERON:0007684;7.33e-66;15!UBERON:0002113;2.25e-50;24!UBERON:0011143;2.25e-50;24!UBERON:0006554;1.68e-48;30!UBERON:0001008;1.68e-48;30!UBERON:0000489;1.60e-41;29!UBERON:0006853;3.70e-38;3!UBERON:0007685;3.70e-38;3!UBERON:0004134;3.70e-38;3!UBERON:0001225;4.95e-37;12!UBERON:0008987;4.95e-37;12!UBERON:0001851;1.34e-29;15!UBERON:0000353;1.34e-29;15!UBERON:0005172;4.82e-15;52!UBERON:0005173;4.82e-15;52!UBERON:0002417;3.04e-11;58!UBERON:0000916;3.04e-11;58!UBERON:0003103;8.68e-10;61!UBERON:0003567;1.93e-07;2!UBERON:0003838;1.93e-07;2!UBERON:0003586;1.93e-07;2!UBERON:0005169;1.93e-07;2!UBERON:0002321;1.93e-07;2!UBERON:0005215;1.93e-07;2!UBERON:0002303;1.93e-07;2!UBERON:0002319;1.93e-07;2!UBERON:0003914;2.67e-07;74 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,4.27e-99,10;UBERON:0004211,7.63e-66,15;UBERON:0009773,7.63e-66,15;UBERON:0001231,7.63e-66,15;UBERON:0001285,7.63e-66,15;UBERON:0007684,7.63e-66,15;UBERON:0004208,7.63e-66,15;UBERON:0006555,1.10e-61,16;UBERON:0004819,1.10e-61,16;UBERON:0002113,1.82e-46,26;UBERON:0003918,1.82e-46,26;UBERON:0011143,1.82e-46,26;UBERON:0005095,1.82e-46,26;UBERON:0007687,1.82e-46,26;UBERON:0000489,8.14e-39,31;UBERON:0006853,5.76e-38,3;UBERON:0007685,5.76e-38,3;UBERON:0004134,5.76e-38,3;UBERON:0001225,6.37e-37,12;UBERON:0008987,6.37e-37,12;UBERON:0006554,1.39e-30,47;UBERON:0001008,6.37e-30,48;UBERON:0001851,1.64e-29,15;UBERON:0000353,1.64e-29,15;UBERON:0005172,7.80e-22,54;UBERON:0005173,7.80e-22,54;UBERON:0002417,1.54e-19,60;UBERON:0000916,1.54e-19,60;UBERON:0003103,4.17e-17,68;UBERON:0005177,3.97e-11,101;UBERON:0009569,6.51e-10,112;UBERON:0003914,1.34e-07,117;UBERON:0003567,1.87e-07,2;UBERON:0003838,1.87e-07,2;UBERON:0003586,1.87e-07,2;UBERON:0005169,1.87e-07,2;UBERON:0002321,1.87e-07,2;UBERON:0005215,1.87e-07,2;UBERON:0002303,1.87e-07,2;UBERON:0002319,1.87e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6024118375565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201057944823262,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283550194484773,0,0,0,0,0,0.207328115540772,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606255142892519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,2.25599806453706,2.0794141018192,4.70609861506113,1.46139224653261,1.89992932007176,0,0,0.647747748306418,0,0.812839312631559,1.50506932156456,1.01950509218015,4.15538004464362,3.58199607555485,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.768760269460425,1.14851441245126,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,1.68471475667626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0.568272293612826,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0.179736702294654,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,2.3209787098083,0.489698424477443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347119476670262,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0.320635281006135,0.213452994739353,0.19980960958213,0.144090417154106,0,0,0.14405479798815,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315132729228895,0.494495150286999,0.13480708770837,0,0,0,0,0,0,0,1.349843349309,32.4996820914339,0,0,0.157611414598396,0.262272940674991,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0.115525666150338,0,0,0,0,0.40341013740704,0,0,0.163771917510097,0.591424344868181,0,0,0,0,0,0,0,0,0,0,0,0.606965604236632,0.227662191351298,0,0,0,0,0,0,0,0,0,0,0,1.72742072974897,0.9555033757741,0,0,0,0,0,0,0,0,0,0,0,0,3.2074961596167,0,0,0.111855431797792,0.098150233615243,0.243835849964539,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160482733378337,0.730336388246517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0.435433495793923,0,0.0673520530145875,0,0,0,0,0,0.988077223172456,0,0.122241444182866,0,0,0,0 | |||
|short_description=p@chr1:1100457..1100470,+ | |||
}} |
Latest revision as of 19:22, 27 July 2015
Short description: | p@chr1:1100457..1100470, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:1100457..1100470, + |
Coexpression cluster: | C120_immature_salivary_tongue_skin_cervical_CD14_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 4.27e-99 | 10 |
nephron tubule epithelial cell | 4.27e-99 | 10 |
kidney cell | 1.50e-71 | 17 |
kidney epithelial cell | 1.50e-71 | 17 |
epithelial cell of nephron | 7.63e-66 | 15 |
brush border epithelial cell | 5.76e-38 | 3 |
kidney cortex tubule cell | 5.76e-38 | 3 |
epithelial cell of proximal tubule | 5.76e-38 | 3 |
kidney cortical cell | 6.37e-37 | 12 |
renal cortical epithelial cell | 6.37e-37 | 12 |
CD1a-positive Langerhans cell | 5.96e-26 | 2 |
immature CD1a-positive Langerhans cell | 5.96e-26 | 2 |
Langerhans cell | 5.57e-11 | 5 |
immature conventional dendritic cell | 2.66e-09 | 5 |
common dendritic progenitor | 2.66e-09 | 5 |
epithelial cell | 6.63e-08 | 253 |
mesangial cell | 1.87e-07 | 2 |
kidney interstitial cell | 1.87e-07 | 2 |
juxtaglomerular complex cell | 1.87e-07 | 2 |
renal interstitial pericyte | 1.87e-07 | 2 |
extraglomerular mesangial cell | 1.87e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 1.28e-07 | 2 |