FFCP PHASE1:Hg19::chr19:48016024..48016046,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:48016024..48016046,- | |||
|description=CAGE_peak_at_chr19:48016024..48016046,- | |description=CAGE_peak_at_chr19:48016024..48016046,- | ||
|id=chr19:48016024..48016046,- | |id=chr19:48016024..48016046,- | ||
|ontology_enrichment_celltype=CL:1000497!4.07e-07!18;CL:0002518!4.07e-07!18;CL:1000507!5.30e-07!12;CL:1000494!5.30e-07!12 | |ontology_enrichment_celltype=CL:1000497!4.07e-07!18;CL:0002518!4.07e-07!18;CL:1000507!5.30e-07!12;CL:1000494!5.30e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:1000507;1.51e-15;10!CL:1000494;1.51e-15;10!CL:1000497;1.48e-14;17!CL:0002518;1.48e-14;17!CL:0000239;4.27e-11;3!CL:1000615;4.27e-11;3!CL:0002306;4.27e-11;3!CL:1000449;5.45e-10;15!CL:0000515;6.05e-10;3!CL:0002681;1.85e-09;12!CL:0002584;1.85e-09;12!CL:0000056;1.47e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,1.22e-15,10;CL:1000494,1.22e-15,10;CL:1000497,1.28e-14,17;CL:0002518,1.28e-14,17;CL:0000239,4.30e-11,3;CL:1000615,4.30e-11,3;CL:0002306,4.30e-11,3;CL:1000449,4.76e-10,15;CL:0002681,1.59e-09,12;CL:0002584,1.59e-09,12;CL:0000515,2.36e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0003104;1.20e-08;31!UBERON:0003918;3.68e-08;10!UBERON:0007687;3.68e-08;10!CL:0000515;1.47e-07;4 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.14e-18!115;UBERON:0002417!1.42e-09!61;UBERON:0000916!1.42e-09!61;UBERON:0005172!1.89e-09!55;UBERON:0005173!1.89e-09!55;UBERON:0006554!1.64e-08!44;UBERON:0001008!3.80e-08!45;UBERON:0003887!7.54e-08!21;UBERON:0002113!2.74e-07!27;UBERON:0003918!2.74e-07!27;UBERON:0005095!2.74e-07!27;UBERON:0007687!2.74e-07!27;UBERON:0009773!5.30e-07!12;UBERON:0001231!5.30e-07!12;UBERON:0004810!5.30e-07!12;UBERON:0000489!8.27e-07!32;UBERON:0000080!9.16e-07!18;UBERON:0002120!9.16e-07!18;UBERON:0004875!9.16e-07!18;UBERON:0005721!9.16e-07!18;UBERON:0005754!9.16e-07!18;UBERON:0007297!9.16e-07!18 | |ontology_enrichment_uberon=UBERON:0007023!1.14e-18!115;UBERON:0002417!1.42e-09!61;UBERON:0000916!1.42e-09!61;UBERON:0005172!1.89e-09!55;UBERON:0005173!1.89e-09!55;UBERON:0006554!1.64e-08!44;UBERON:0001008!3.80e-08!45;UBERON:0003887!7.54e-08!21;UBERON:0002113!2.74e-07!27;UBERON:0003918!2.74e-07!27;UBERON:0005095!2.74e-07!27;UBERON:0007687!2.74e-07!27;UBERON:0009773!5.30e-07!12;UBERON:0001231!5.30e-07!12;UBERON:0004810!5.30e-07!12;UBERON:0000489!8.27e-07!32;UBERON:0000080!9.16e-07!18;UBERON:0002120!9.16e-07!18;UBERON:0004875!9.16e-07!18;UBERON:0005721!9.16e-07!18;UBERON:0005754!9.16e-07!18;UBERON:0007297!9.16e-07!18 | ||
|ontology_enrichment_uberon_v019=UBERON:0004211;1.51e-15;10!UBERON:0009773;1.51e-15;10!UBERON:0001231;1.51e-15;10!UBERON:0004810;1.51e-15;10!UBERON:0006554;1.60e-15;30!UBERON:0001008;1.60e-15;30!UBERON:0002113;1.47e-14;24!UBERON:0011143;1.47e-14;24!UBERON:0000489;1.28e-11;29!UBERON:0006853;4.27e-11;3!UBERON:0007685;4.27e-11;3!UBERON:0004134;4.27e-11;3!UBERON:0005172;1.21e-10;52!UBERON:0005173;1.21e-10;52!UBERON:0006555;5.45e-10;15!UBERON:0004819;5.45e-10;15!UBERON:0001285;5.45e-10;15!UBERON:0007684;5.45e-10;15!UBERON:0001225;1.85e-09;12!UBERON:0008987;1.85e-09;12!UBERON:0002365;1.40e-08;31!UBERON:0002330;1.40e-08;31!UBERON:0002417;2.05e-08;58!UBERON:0000916;2.05e-08;58!UBERON:0002107;1.89e-07;19!UBERON:0006925;1.89e-07;19!UBERON:0001851;2.05e-07;15!UBERON:0000353;2.05e-07;15!UBERON:0000178;6.85e-07;15!UBERON:0000179;6.85e-07;15!UBERON:0000463;6.85e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005172,3.33e-17,54;UBERON:0005173,3.33e-17,54;UBERON:0002113,6.79e-16,26;UBERON:0003918,6.79e-16,26;UBERON:0011143,6.79e-16,26;UBERON:0005095,6.79e-16,26;UBERON:0007687,6.79e-16,26;UBERON:0004810,1.22e-15,10;UBERON:0002417,5.47e-15,60;UBERON:0000916,5.47e-15,60;UBERON:0006554,6.48e-14,47;UBERON:0001008,1.53e-13,48;UBERON:0000489,7.13e-13,31;UBERON:0006853,4.30e-11,3;UBERON:0007685,4.30e-11,3;UBERON:0004134,4.30e-11,3;UBERON:0004211,4.76e-10,15;UBERON:0009773,4.76e-10,15;UBERON:0001231,4.76e-10,15;UBERON:0001285,4.76e-10,15;UBERON:0007684,4.76e-10,15;UBERON:0004208,4.76e-10,15;UBERON:0001225,1.59e-09,12;UBERON:0008987,1.59e-09,12;UBERON:0006555,2.37e-09,16;UBERON:0004819,2.37e-09,16;UBERON:0002365,2.54e-08,31;UBERON:0002330,2.54e-08,31;UBERON:0005177,5.96e-08,101;UBERON:0001851,1.82e-07,15;UBERON:0000353,1.82e-07,15;UBERON:0002107,1.97e-07,19;UBERON:0006925,1.97e-07,19;UBERON:0008836,1.97e-07,19;UBERON:0000178,8.13e-07,15;UBERON:0000179,8.13e-07,15;UBERON:0000463,8.13e-07,15;UBERON:0009569,8.89e-07,112 | |||
|phase1_expression=0.181678379270557,0,0.281908808191942,0,0,0,0,0,0,0.245733936501509,0,0,0,0.990130823680373,0.994192127183747,0,0,0,0,0,0,0,0,0,0,0.458480434487708,0.246301768349837,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0.256160706529101,0.236482229888585,0,0.645484683583826,0,0,0,0.224723484445085,0,0,0,0,0.199463657621632,0,0.580418477257168,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0.668462741311041,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0.50133791063589,0.579386075843295,0,0,0,0,0,1.37528029272598,0,0,0.324547393654683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0.624320153660641,0,0.448346041655403,0,0,0,0.204154171254893,0,0.516628905878827,0,0,0,0,0,0,0,0,0.30648779579902,0.150238058906597,0,0,0.213557388818567,0.423863802319124,0,0.618315175430633,0,0.37223371266318,0.168776332241266,0.292311015483596,0,0.368199594569197,0.161646056818812,0,0.302256294682921,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39310378409594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53510069643662,7.86261773342101,9.45263850690247,0,2.58275720940538,0,0,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,3.57656445851882,0,0.26593811658487,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0.871533458600294,0,0,0,0,0,0,0,1.01346914667305,3.90405012845728,1.25342674267927,0,0,0.215627574859517,0,0,0,0,0,0,0.749007023947182,0,0,0.36807447515742,0.500170521059677,0.271265023699736,0.415941723061614,0,0.157702415033935,0.819989904948992,0.300946099727719,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0.30239029332968,0,0,0,0.256278298511402,0,0.321707842287215,0,0,0,0,0,0,2.90062679019893,0.200506470303285,0,0,0,0,4.51199612907412,2.46449078734127,0.784349769176855,0,3.27210049567915,0,0,0.215915916102139,0,0.812839312631559,1.50506932156456,6.37190682612596,4.15538004464362,4.25362033972139,0.219259876645935,0,0,0,0,5.564214628977,0,0,0,0,0,0.096670718292122,0,0,0,0.107420244868274,0.435050081742686,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272999822815972,0,0,0,0.66343897524122,0,0,0,0,0,0,0,0.0982490410131212,0,0.709522128141196,0.211107635297664,0,0,0,0.0962221127255121,0,0,5.55448424582997,0,1.68471475667626,0.443430153536676,1.37834040124176,2.02979043692868,1.52927441428475,1.13929437434833,0.238231775457789,0.822724546172388,1.29694662238543,2.16012574895246,2.37937552888281,0,0,0,0,0,0,0,0,0,0.423347165447766,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0.811367035427949,0,1.4098700508785,0.748562161632879,0.439524537815682,0,0,0,0,0,0,0.994147647766298,0.422008249231538,0.445234820091624,0,0,0.19924798825107,0.552567831062295,10.5811754098796,0,0,0.311039587661807,0,0.537063524026827,0,0.197286811273867,0,0,0.969332746095218,0.278304294485554,0,0,5.94727999974131,0,0,0,0,0,2.62444152044929,0,0,0.120596438625408,0,0,1.47773809476774,0,0,0,0.615602068030377,0,0,0,0,0,0.0915975934018623,0,0,0.470940769185074,0.332423363800313,0,0,0,0,0.158936578980379,3.58696709697646,0.489698424477443,2.68570835724488,0,1.99052386215701,0.265372693510018,3.05515072466813,0,0,0,0.067401132980677,0,0,0,0,0,0,1.20990716048664,0,0.126373159256976,0,0,0,0,0,0,5.97680046662565,0.138674673013139,0,0,0,0.52418000472609,0,0,0,0,0.581934098930517,1.059073520298,0.225980740780532,0,0,0.50648636764703,0,0,0.426905989478705,0,1.58499458869517,0,0.686379991447858,0,0.49701014226173,0,0,0,0.203996435272644,0,0,0,0,0,0,0.558564802544508,0.229160424011684,0,0,0,0.446342914883745,0,0,1.16495949527454,0.787831823072237,0.576911008668165,1.48287796479207,0.393709926058995,0,0,0.408610218334727,0,0,0,0,0,1.39723980313457,0,1.41850273138557,3.09482069996489,0,0,0,0,0,0,0,0,1.30634944043764,0,0.164185041498678,0.511164065356265,0,10.5517608248219,1.32506888912221,0,0,0.342173675768659,0,0.533937062838473,0.78602152549833,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0.976210119215705,0.1251909307065,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0.554805861502613,0,0,1.77962244319307,0,0,0,0,0,0,0.155262956876259,0,0,0,0.150257608997218,0,0,0,0.214821114084977,0.464033759878494,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,1.09642024789354,0,0,0,2.30617366729152,0,0,0.691292180758654,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0.963438376446893,1.41696576325585,0,0.205116364240755,0,0.276629009856872,0.484426936895553,0,0,0,0,0,0,0,0,0.902523940191087,0,1.56302802246618,0,0,0,0.405225507710368,0,0,0.570742291745161,0,0.548257766857182,0,0,0,0.535701835878287,0,0,0.227662191351298,0.177404740325278,0,0,0.203909198930495,0.526182188502793,0,0.222462803784138,1.41287567130925,0,0,0,9.50081401361934,10.5105371335151,0.285906176706625,0,0.116241425368125,0,0,1.03608082081518,0.6828739083758,0,0,0,0,2.11693525095465,0,0,0,4.13865097651832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|phase1_expression=0.181678379270557,0,0.281908808191942,0,0,0,0,0,0,0.245733936501509,0,0,0,0.990130823680373,0.994192127183747,0,0,0,0,0,0,0,0,0,0,0.458480434487708,0.246301768349837,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0.256160706529101,0.236482229888585,0,0.645484683583826,0,0,0,0.224723484445085,0,0,0,0,0.199463657621632,0,0.580418477257168,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0.668462741311041,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0.50133791063589,0.579386075843295,0,0,0,0,0,1.37528029272598,0,0,0.324547393654683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0.624320153660641,0,0.448346041655403,0,0,0,0.204154171254893,0,0.516628905878827,0,0,0,0,0,0,0,0,0.30648779579902,0.150238058906597,0,0,0.213557388818567,0.423863802319124,0,0.618315175430633,0,0.37223371266318,0.168776332241266,0.292311015483596,0,0.368199594569197,0.161646056818812,0,0.302256294682921,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39310378409594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53510069643662,7.86261773342101,9.45263850690247,0,2.58275720940538,0,0,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,3.57656445851882,0,0.26593811658487,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0.871533458600294,0,0,0,0,0,0,0,1.01346914667305,3.90405012845728,1.25342674267927,0,0,0.215627574859517,0,0,0,0,0,0,0.749007023947182,0,0,0.36807447515742,0.500170521059677,0.271265023699736,0.415941723061614,0,0.157702415033935,0.819989904948992,0.300946099727719,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0.30239029332968,0,0,0,0.256278298511402,0,0.321707842287215,0,0,0,0,0,0,2.90062679019893,0.200506470303285,0,0,0,0,4.51199612907412,2.46449078734127,0.784349769176855,0,3.27210049567915,0,0,0.215915916102139,0,0.812839312631559,1.50506932156456,6.37190682612596,4.15538004464362,4.25362033972139,0.219259876645935,0,0,0,0,5.564214628977,0,0,0,0,0,0.096670718292122,0,0,0,0.107420244868274,0.435050081742686,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272999822815972,0,0,0,0.66343897524122,0,0,0,0,0,0,0,0.0982490410131212,0,0.709522128141196,0.211107635297664,0,0,0,0.0962221127255121,0,0,5.55448424582997,0,1.68471475667626,0.443430153536676,1.37834040124176,2.02979043692868,1.52927441428475,1.13929437434833,0.238231775457789,0.822724546172388,1.29694662238543,2.16012574895246,2.37937552888281,0,0,0,0,0,0,0,0,0,0.423347165447766,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0.811367035427949,0,1.4098700508785,0.748562161632879,0.439524537815682,0,0,0,0,0,0,0.994147647766298,0.422008249231538,0.445234820091624,0,0,0.19924798825107,0.552567831062295,10.5811754098796,0,0,0.311039587661807,0,0.537063524026827,0,0.197286811273867,0,0,0.969332746095218,0.278304294485554,0,0,5.94727999974131,0,0,0,0,0,2.62444152044929,0,0,0.120596438625408,0,0,1.47773809476774,0,0,0,0.615602068030377,0,0,0,0,0,0.0915975934018623,0,0,0.470940769185074,0.332423363800313,0,0,0,0,0.158936578980379,3.58696709697646,0.489698424477443,2.68570835724488,0,1.99052386215701,0.265372693510018,3.05515072466813,0,0,0,0.067401132980677,0,0,0,0,0,0,1.20990716048664,0,0.126373159256976,0,0,0,0,0,0,5.97680046662565,0.138674673013139,0,0,0,0.52418000472609,0,0,0,0,0.581934098930517,1.059073520298,0.225980740780532,0,0,0.50648636764703,0,0,0.426905989478705,0,1.58499458869517,0,0.686379991447858,0,0.49701014226173,0,0,0,0.203996435272644,0,0,0,0,0,0,0.558564802544508,0.229160424011684,0,0,0,0.446342914883745,0,0,1.16495949527454,0.787831823072237,0.576911008668165,1.48287796479207,0.393709926058995,0,0,0.408610218334727,0,0,0,0,0,1.39723980313457,0,1.41850273138557,3.09482069996489,0,0,0,0,0,0,0,0,1.30634944043764,0,0.164185041498678,0.511164065356265,0,10.5517608248219,1.32506888912221,0,0,0.342173675768659,0,0.533937062838473,0.78602152549833,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0.976210119215705,0.1251909307065,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0.554805861502613,0,0,1.77962244319307,0,0,0,0,0,0,0.155262956876259,0,0,0,0.150257608997218,0,0,0,0.214821114084977,0.464033759878494,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,1.09642024789354,0,0,0,2.30617366729152,0,0,0.691292180758654,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0.963438376446893,1.41696576325585,0,0.205116364240755,0,0.276629009856872,0.484426936895553,0,0,0,0,0,0,0,0,0.902523940191087,0,1.56302802246618,0,0,0,0.405225507710368,0,0,0.570742291745161,0,0.548257766857182,0,0,0,0.535701835878287,0,0,0.227662191351298,0.177404740325278,0,0,0.203909198930495,0.526182188502793,0,0.222462803784138,1.41287567130925,0,0,0,9.50081401361934,10.5105371335151,0.285906176706625,0,0.116241425368125,0,0,1.03608082081518,0.6828739083758,0,0,0,0,2.11693525095465,0,0,0,4.13865097651832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| ||
|short_description=p@chr19:48016024..48016046,- | |short_description=p@chr19:48016024..48016046,- | ||
}} | }} |
Latest revision as of 15:33, 27 July 2015
Short description: | p@chr19:48016024..48016046, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:48016024..48016046, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 1.22e-15 | 10 |
nephron tubule epithelial cell | 1.22e-15 | 10 |
kidney cell | 1.28e-14 | 17 |
kidney epithelial cell | 1.28e-14 | 17 |
brush border epithelial cell | 4.30e-11 | 3 |
kidney cortex tubule cell | 4.30e-11 | 3 |
epithelial cell of proximal tubule | 4.30e-11 | 3 |
epithelial cell of nephron | 4.76e-10 | 15 |
kidney cortical cell | 1.59e-09 | 12 |
renal cortical epithelial cell | 1.59e-09 | 12 |
skeletal muscle myoblast | 2.36e-07 | 4 |