FFCP PHASE1:Hg19::chr18:35104762..35104763,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:35104762..35104763,- | |||
|description=CAGE_peak_at_chr18:35104762..35104763,- | |description=CAGE_peak_at_chr18:35104762..35104763,- | ||
|id=chr18:35104762..35104763,- | |id=chr18:35104762..35104763,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:1000746;1.32e-09;7!CL:1000612;1.32e-09;7!CL:0002262;2.22e-09;2!CL:1000398;2.22e-09;2!CL:0002681;2.52e-08;12!CL:0002584;2.52e-08;12!CL:0002188;4.81e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:1000746,1.72e-09,7;CL:1000612,1.72e-09,7;CL:0002262,1.82e-09,2;CL:1000398,1.82e-09,2;CL:0002681,2.40e-08,12;CL:0002584,2.40e-08,12;CL:0002188,4.79e-08,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000353;1.49e-12;15!UBERON:0000074;1.32e-09;7!UBERON:0001229;1.32e-09;7!UBERON:0001281;2.22e-09;2!UBERON:0003497;2.22e-09;2!UBERON:0003909;2.22e-09;2!UBERON:0003835;2.22e-09;2!UBERON:0001225;2.52e-08;12!UBERON:0008987;2.52e-08;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000353,1.29e-12,15;UBERON:0010532,1.72e-09,7;UBERON:0000074,1.72e-09,7;UBERON:0001229,1.72e-09,7;UBERON:0001230,1.72e-09,7;UBERON:0003220,1.72e-09,7;UBERON:0005749,1.72e-09,7;UBERON:0004199,1.72e-09,7;UBERON:0004209,1.72e-09,7;UBERON:0004198,1.72e-09,7;UBERON:0001281,1.82e-09,2;UBERON:0003497,1.82e-09,2;UBERON:0003909,1.82e-09,2;UBERON:0003835,1.82e-09,2;UBERON:0001225,2.40e-08,12;UBERON:0008987,2.40e-08,12;UBERON:0005103,2.61e-08,8;UBERON:0000083,2.61e-08,8;UBERON:0009201,2.61e-08,8;UBERON:0006553,2.61e-08,8;UBERON:0003074,2.61e-08,8;UBERON:0003060,2.61e-08,8;UBERON:0000080,2.17e-07,9;UBERON:0002120,2.17e-07,9;UBERON:0004875,2.17e-07,9;UBERON:0005721,2.17e-07,9;UBERON:0005754,2.17e-07,9;UBERON:0007297,2.17e-07,9;UBERON:0000058,3.18e-07,19 | |||
|phase1_expression=0,0,0.281908808191942,0,0.446961094427288,0,0,0.631719873426831,0.261185628199839,0.491467873003018,3.48900583986214,0.873765488520689,0.263766978228454,0.247532705920093,0,0,0,0,0.487932798790507,0.61560529038394,0.204000691244253,0.626909442956176,0.286235987131057,0.410623275218653,0.125542639594803,0,0,0,0.393364276848904,0,0.309632246632152,0,0,1.10926203050036,0.154934401160603,0,0,0,0.802177789880567,0.434021741431704,0,0.32389366601898,0,0.290796477559129,0,0,0.464858073811369,0,0.929119112685311,0,0.512321413058201,0.236482229888585,0.344745680736619,0,0,0,0.545812300115692,0,0,0.320929027076094,0.639337125799041,0,0.199463657621632,0.426224750532694,0,0,0,0,0,0,0,0,0,0.422510572623884,0.212604299965044,0.419317291016752,0.112328631146495,0.750884464207532,1.12507910687956,0.285012743741249,0.79566670879636,0.365328307529268,0,0,0,0,0,0,0,0,1.70763890732835,0,1.14681968437569,0,0,0.790152254325231,0.393419540227666,0,0.411202997999018,0.501559486172034,0.32592226663359,0,3.89653456815823,0.668462741311041,0.589211814949674,0.221533894583621,1.89562704635511,0.384273959177026,0.130059347559878,0.493313713811028,1.10540007114339,0.579606171470105,0.296573126324121,0.535081656179426,3.1360657141493,0.226618685395132,0.383220493601921,0,0.759059076058509,0.318565414324097,0,0,0,0,0,0,0,0.604820229674197,0,0.434473211648397,0,0,0.383587685530591,0.361439152384566,0.50133791063589,0,0,0,0.189069634328136,0,0,0.130979075497713,1.09288586487763,0.370784442784429,0,0,0,0.715471872916026,0,0,0,0.860234595106124,1.04142150482278,0,0,0.275118041940067,0.417989933073621,0,0,0,0.805658634218294,0,0,0,0.81014194788176,0.17859945656816,0.22452937262617,0.112611480483322,0,0,0.183201743930407,0,0,0.436094052142534,0.496971951695318,0.12663051166458,0,0.860509862246441,0,0,1.06748995729705,0.24666754841716,0.311211035399766,0.269421344139376,0.326923806226917,0.151357427644931,0,3.04617861383936,0,0,0.149448680551801,0.117434498643765,0.161872944368132,0.140450806702248,0,0.122834317311768,0.413303124703062,0,0.247266929278557,0,0,0,0,0,0.877955241761676,0,0.150238058906597,0.113432183160021,0.358779271377724,0.213557388818567,0.211931901159562,0.300091096084402,0.103052529238439,0.257640540045629,0,0.168776332241266,0,0,0,0.161646056818812,0.710019185033229,0.201504196455281,0.339121184620975,0.193260853163297,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0.354920400119532,0.505754070234305,0,0.330881918197182,0.435758888184812,0.474541238222193,0.134831308160164,0.196221465125346,0,2.21446636387394,1.40241773803446,0.4115740113314,0,1.26755034821831,0,0,0,0,0,0.219500570817251,1.1240175325762,0.100528972411631,0.0925884451585296,0.651616610620649,1.03993478527958,0,0.579652024875384,0.117408694235822,0.144366447761074,0.462985512576611,0.190254152234598,1.58040879591855,0.858486162094873,0.246217006087397,0,0,0,0.671928512795438,0.283550194484773,0.0895585227028483,1.45316969256981,0,0,0.176096868026452,0.414656231081544,0.432359860250884,0.6312121671319,0.253991577168676,0.763976851116555,1.17217447210047,0,0,0,0,0.336393253036082,0.43596006883328,0,0,0,0,0.797814349754612,0,1.02882949704857,0,0.532844358032199,0.142977993658148,1.08524321078289,0,0,0,0.791951872933429,0,0,0.099972991182057,1.2162378064119,1.00451418286425,0,0,0,1.42636905040718,0,0,0.179060963239896,0.112085143993527,0.197030760201927,0.215627574859517,0,0.254094624222463,2.60279707715243,3.09315525111078,0.335032530668698,1.27587750330633,0,0,0,0,0,0.271265023699736,0.623912584592421,0.356857977594324,0,0.234282829985426,0.300946099727719,0,0,0,0,0,0.979005787313703,0.686286847621712,0,0.215714200818617,0.106727557803444,0.606255142892519,0,1.5119514666484,0.248107807818777,0.153461973288062,0,0,0,0.160853921143607,0,0.308419387605311,0,0,0,0,0,0,0.184161977871793,0.114814448164607,0.182091168006717,0.131124414959424,0.902399225814824,0.15403067420883,0.784349769176855,0,0.211103257785751,0,0,1.0795795805107,1.54227252690289,1.08378575017541,0.501689773854853,0.509752546090077,1.66215201785745,0.671624264166535,1.31555925987561,0,0.256450125116389,0.656029291399411,0,0.309123034943167,0.183138929636687,0.082509499920588,0,0,0,0,0.154048617114644,0,0,0,0,0.0852266274161009,0,0,0,0,0.10115778085555,0.464845549297286,0,0,0,0,0,0.18532421910392,0.143124886741991,0,0,0.190630193923825,0,0.42793898803392,0,0.78494864019923,0,0.274537029736055,0.117812402345686,0,0,0,0.975267478179181,0,0,0.409499734223957,0,0,0,0,0,0,0,0.405820753925408,0,0,0.286822704408103,0.196498082026242,0,0,0.422215270595328,0,2.27683904259429,0.349934720244983,0.192444225451024,0,0,0,0.43050537267123,3.36942951335251,0,0,0,0,0,0,0.411362273086194,0.648473311192717,0.540031437238115,0,0,0,0.245040215981032,0.185803175125719,0.144269212976445,0.640276590135727,0,0.399158742865633,0,0,0,0.280797178113459,0,0,2.50634477090067,0.169291777801603,0,0.605399121573143,1.27753871307098,0.687010689511529,0,0,0,0.586164286206121,0,0,0,0.33307196799782,0,0,0.293016358543788,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| ||
|short_description=p@chr18:35104762..35104763,- | |short_description=p@chr18:35104762..35104763,- | ||
}} | }} |
Latest revision as of 00:44, 26 July 2015
Short description: | p@chr18:35104762..35104763, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:35104762..35104763, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glomerular cell | 1.72e-09 | 7 |
kidney corpuscule cell | 1.72e-09 | 7 |
endothelial cell of sinusoid | 1.82e-09 | 2 |
endothelial cell of hepatic sinusoid | 1.82e-09 | 2 |
kidney cortical cell | 2.40e-08 | 12 |
renal cortical epithelial cell | 2.40e-08 | 12 |
glomerular endothelial cell | 4.79e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
parenchyma | 1.29e-12 | 15 |
primitive nephron | 1.72e-09 | 7 |
renal glomerulus | 1.72e-09 | 7 |
renal corpuscle | 1.72e-09 | 7 |
glomerular capsule | 1.72e-09 | 7 |
metanephric mesenchyme | 1.72e-09 | 7 |
glomerular tuft | 1.72e-09 | 7 |
S-shaped body | 1.72e-09 | 7 |
renal vesicle | 1.72e-09 | 7 |
comma-shaped body | 1.72e-09 | 7 |
hepatic sinusoid | 1.82e-09 | 2 |
abdomen blood vessel | 1.82e-09 | 2 |
sinusoid | 1.82e-09 | 2 |
abdominal segment blood vessel | 1.82e-09 | 2 |
cortex of kidney | 2.40e-08 | 12 |
renal parenchyma | 2.40e-08 | 12 |
mesonephric epithelium | 2.61e-08 | 8 |
mesonephric tubule | 2.61e-08 | 8 |
nephric duct | 2.61e-08 | 8 |
renal duct | 2.61e-08 | 8 |
mesonephric duct | 2.61e-08 | 8 |
pronephric duct | 2.61e-08 | 8 |
mesonephros | 2.17e-07 | 9 |
pronephros | 2.17e-07 | 9 |
nephrogenic cord | 2.17e-07 | 9 |
pronephric mesoderm | 2.17e-07 | 9 |
rostral part of nephrogenic cord | 2.17e-07 | 9 |
presumptive pronephric mesoderm | 2.17e-07 | 9 |
duct | 3.18e-07 | 19 |