FFCP PHASE1:Hg19::chr17:48167165..48167190,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr17:48167165..48167190,+
|short_description=p@chr17:48167165..48167190,+
|description=CAGE_peak_at_chr17:48167165..48167190,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:48167165..48167190,+ | |||
|description=CAGE_peak_at_chr17:48167165..48167190,+ | |||
|id=chr17:48167165..48167190,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.87e-36!254;CL:0000220!4.04e-19!246;CL:0002321!1.47e-18!248;CL:0002076!1.29e-14!43;CL:0000548!3.06e-14!679;CL:0000004!3.06e-14!679;CL:0000255!3.06e-14!679;CL:0000012!1.02e-13!682;CL:0000076!1.74e-10!62;CL:0000223!2.02e-10!59;CL:0000063!2.13e-09!578;CL:0002368!3.04e-08!13;CL:0000003!4.92e-08!722;CL:0000144!1.23e-07!625;CL:0002077!3.17e-07!33;CL:1000497!4.96e-07!18;CL:0002518!4.96e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0002076;6.20e-17;42!CL:1000449;5.05e-15;15!CL:1000507;7.91e-14;10!CL:1000494;7.91e-14;10!CL:0002681;2.10e-13;12!CL:0002584;2.10e-13;12!CL:1000497;6.82e-13;17!CL:0002518;6.82e-13;17!CL:0002368;9.36e-10;13!CL:0000244;1.20e-08;4!CL:0000731;1.20e-08;4!CL:0002149;8.34e-08;6!CL:0002255;8.34e-08;6!CL:0000239;7.77e-07;3!CL:1000615;7.77e-07;3!CL:0002306;7.77e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,6.55e-26,253;CL:0002076,1.57e-22,42;CL:0000223,9.66e-17,58;CL:1000449,3.29e-15,15;CL:1000507,5.17e-14,10;CL:1000494,5.17e-14,10;CL:0002681,1.43e-13,12;CL:0002584,1.43e-13,12;CL:1000497,4.70e-13,17;CL:0002518,4.70e-13,17;CL:0002321,6.36e-12,250;CL:0002368,1.20e-09,13;CL:0000244,5.76e-09,4;CL:0000731,5.76e-09,4;CL:0002149,1.40e-07,6;CL:0002255,1.40e-07,6;CL:0002251,3.18e-07,20;CL:0000239,7.48e-07,3;CL:1000615,7.48e-07,3;CL:0002306,7.48e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000223;5.04e-11;58 | |||
|ontology_enrichment_disease=DOID:120!5.17e-09!27;DOID:193!1.36e-08!29 | |||
|ontology_enrichment_disease_v019=DOID:120;1.03e-10;27!DOID:193;1.02e-09;29!DOID:3001;8.34e-08;6!DOID:2394;1.31e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:120,1.88e-10,27;DOID:193,1.77e-09,29;DOID:3001,1.40e-07,6;DOID:2394,1.83e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0006554!9.09e-09!44;UBERON:0001008!2.63e-08!45;UBERON:0000058!2.98e-07!26;UBERON:0004119!3.32e-07!169;UBERON:0000925!3.32e-07!169;UBERON:0006595!3.32e-07!169;UBERON:0003100!3.53e-07!41 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;5.05e-15;15!UBERON:0004819;5.05e-15;15!UBERON:0001285;5.05e-15;15!UBERON:0007684;5.05e-15;15!UBERON:0004211;7.91e-14;10!UBERON:0009773;7.91e-14;10!UBERON:0001231;7.91e-14;10!UBERON:0004810;7.91e-14;10!UBERON:0001225;2.10e-13;12!UBERON:0008987;2.10e-13;12!UBERON:0000353;2.17e-12;15!UBERON:0006554;5.26e-12;30!UBERON:0001008;5.26e-12;30!UBERON:0001851;2.95e-10;15!UBERON:0000486;1.01e-08;12!UBERON:0002113;2.82e-08;24!UBERON:0011143;2.82e-08;24!UBERON:0005910;3.37e-08;6!UBERON:0000365;7.13e-07;5!UBERON:0006853;7.77e-07;3!UBERON:0007685;7.77e-07;3!UBERON:0004134;7.77e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004211,3.29e-15,15;UBERON:0009773,3.29e-15,15;UBERON:0001231,3.29e-15,15;UBERON:0001285,3.29e-15,15;UBERON:0007684,3.29e-15,15;UBERON:0004208,3.29e-15,15;UBERON:0006555,4.60e-14,16;UBERON:0004819,4.60e-14,16;UBERON:0004810,5.17e-14,10;UBERON:0001225,1.43e-13,12;UBERON:0008987,1.43e-13,12;UBERON:0000353,1.57e-12,15;UBERON:0006554,7.68e-11,47;UBERON:0001008,1.68e-10,48;UBERON:0001851,2.19e-10,15;UBERON:0005910,2.60e-08,6;UBERON:0002113,1.60e-07,26;UBERON:0003918,1.60e-07,26;UBERON:0011143,1.60e-07,26;UBERON:0005095,1.60e-07,26;UBERON:0007687,1.60e-07,26;UBERON:0000365,4.03e-07,5;UBERON:0003100,7.37e-07,41;UBERON:0006853,7.48e-07,3;UBERON:0007685,7.48e-07,3;UBERON:0004134,7.48e-07,3 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,1.22866968250754,1.39560233594486,0.655324116390517,0.527533956456907,0.495065411840187,0.331397375727916,0.672325146451775,0,1.46062018077475,0,0.246242116153576,1.02000345622126,0.313454721478088,0.286235987131057,1.36874425072884,0.376627918784408,0.0764134057479513,0,0.0787107813136792,0,0,0,0.919421224478927,0.90361775633475,2.21852406100073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0.12786256184353,0,0,0.434539556882471,0,0,0.378139268656271,0.665188192387692,0.614843499851882,0,1.45718115317017,2.59549109949101,0,0,0.132957960518865,0,0,0,0.198762407366705,0.860234595106124,0.694281003215189,0.56530794192401,0.419499436209906,1.6507082516404,0.208994966536811,0.258416759169329,0,0,0.402829317109147,0,0.976248230192678,0.367663080345869,0.81014194788176,0,0.44905874525234,0,0,0,0,0,0,1.3082821564276,0,0.379891534993739,0.132409180813219,0.860509862246441,0.709336764396714,0.560677600142307,0,3.45334567784024,0,0.538842688278752,0.326923806226917,0.302714855289863,0,0,0.624320153660641,0,0.149448680551801,0,0,0,0,0.368502951935304,0.103325781175765,0,0,0,1.43723628363248,0.168336113954066,0,0,0,0,0.300476117813194,0.453728732640084,0.89694817844431,0.213557388818567,0,0.300091096084402,0,0.515281080091258,0.37223371266318,0.168776332241266,0.487185025805993,0.252433774244115,0,0.323292113637624,2.13005755509969,0.705264687593482,0.67824236924195,1.73934767846967,1.63647672354501,1.43402297694502,0,0,0,0.207322110030741,0.252320850875628,0,0,2.57296375277154,0,0.464367928031979,0.721879481669586,0.591534000199219,0.674338760312407,1.20505514941741,1.32352767278873,1.30727666455444,0.71181185733329,0.808987848960987,0.588664395376038,0,0,0,0.8231480226628,2.94017422771084,0,0,0,0,0.122988438543114,0.857839051492628,2.96325770603289,0,3.01586917234893,3.24059558054854,0,0,0,0.34779121492523,0.117408694235822,0.577465791044295,0,0,0,0,0,0.468008530278475,0,0.93733833986777,1.6798212819886,1.55952606966625,1.70161193135412,3.19697332365358,2.30029607499127,0,0,0.621984346622316,0,0,0.063497894292169,0.763976851116555,0,0,0.925447434329912,0.901029173531752,0,0.112131084345361,0.43596006883328,0.66004457238855,0,0,1.690605505112,0.26593811658487,1.04007436911366,1.02882949704857,1.41849132023278,0.532844358032199,0,0,0,0.325736184293735,0.710783897485092,0,3.01439377059586,0.871533458600294,1.29964888536674,1.2162378064119,0,4.21667878966063,1.19812427745791,0,0,1.15825045334063,1.84928690295345,0.895304816199478,0,0,0,0,0,0,0,0.335032530668698,1.27587750330633,0,0,0,0,1.00034104211935,0.813795071099207,1.03985430765404,2.14114786556594,1.10391690523754,0,0,0,1.03473071292505,0,0,0.260650843404249,0.195801157462741,0.343143423810856,0,0,0,0.303127571446259,1.66435439510497,0.30239029332968,0,0.153461973288062,0.280660094433074,0.256278298511402,1.53512174720011,0,0,0.308419387605311,0.355123450626254,0.246381468041427,0,0.348631135379878,0.120859449591622,4.61164881697555,3.95948252424354,0.34444334449382,0.182091168006717,0.131124414959424,1.35359883872224,1.5403067420883,1.56869953835371,0,2.00548094896464,0,0.170093705276516,1.29549549661284,1.54227252690289,1.62567862526312,3.01013864312912,2.29388645740534,3.3243040357149,2.68649705666614,0,0,0.512900250232778,1.96808787419823,0.650756789328606,0,0,0,0.574265537996172,4.55042172225565,0,0,0,0,0,0.107420244868274,0,0.255679882248303,0,4.29740779938543,1.72971060628596,1.78657797492418,1.2138933702666,0,1.5740617341532,0,1.23213432070436,0,0,0.74129687641568,0.286249773483982,0.372158369359667,0.316379424718726,1.14378116354295,0.767693373934002,0,0,0,0.179872457583315,0.54907405947211,0,0.202182481573316,0,0,0,0.243713489631284,0,0.136499911407986,0.141405431953713,0,0,0,0,0.578775534266688,0,0.608731130888112,0.92947049429925,0.563391205064483,0.143411352204052,0.294747123039363,0.35667105148125,0.354761064070598,0.211107635297664,0,0,0,0.577332676353072,1.34060455107157,3.26672954583968,0.0941438007767792,4.73555909938353,6.73885902670502,3.99087138183008,1.83778720165568,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.146508179271894,0,0,0.284136146806413,0,0.296964680832639,0,0,0,0.222617410045812,0.16480387422676,0,0.398495976502139,0,0.251932747854276,0.409074730008619,0,0.933118762985422,0.808815160325942,0.179021174675609,0.511572370226872,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0.910347586283997,1.01701460117107,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0.0769502585037971,1.36730467016401,0,0,0.108647371922008,0.31900115973192,0.183195186803725,0,0,0,0,0,0,0,0,0,5.06395354867265,0.979396848954886,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0.728341138602278,0.394584402849391,0,0,0,0,0.103688191397247,0,0.661983911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| ||
|short_description=p@chr17:48167165..48167190,+ | |||
}} | }} |
Latest revision as of 18:27, 25 July 2015
Short description: | p@chr17:48167165..48167190, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:48167165..48167190, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 6.55e-26 | 253 |
endo-epithelial cell | 1.57e-22 | 42 |
endodermal cell | 9.66e-17 | 58 |
epithelial cell of nephron | 3.29e-15 | 15 |
kidney tubule cell | 5.17e-14 | 10 |
nephron tubule epithelial cell | 5.17e-14 | 10 |
kidney cortical cell | 1.43e-13 | 12 |
renal cortical epithelial cell | 1.43e-13 | 12 |
kidney cell | 4.70e-13 | 17 |
kidney epithelial cell | 4.70e-13 | 17 |
embryonic cell | 6.36e-12 | 250 |
respiratory epithelial cell | 1.20e-09 | 13 |
transitional epithelial cell | 5.76e-09 | 4 |
urothelial cell | 5.76e-09 | 4 |
epithelial cell of uterus | 1.40e-07 | 6 |
stromal cell of endometrium | 1.40e-07 | 6 |
epithelial cell of alimentary canal | 3.18e-07 | 20 |
brush border epithelial cell | 7.48e-07 | 3 |
kidney cortex tubule cell | 7.48e-07 | 3 |
epithelial cell of proximal tubule | 7.48e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
nephron epithelium | 3.29e-15 | 15 |
renal tubule | 3.29e-15 | 15 |
nephron tubule | 3.29e-15 | 15 |
nephron | 3.29e-15 | 15 |
uriniferous tubule | 3.29e-15 | 15 |
nephrogenic mesenchyme | 3.29e-15 | 15 |
excretory tube | 4.60e-14 | 16 |
kidney epithelium | 4.60e-14 | 16 |
nephron tubule epithelium | 5.17e-14 | 10 |
cortex of kidney | 1.43e-13 | 12 |
renal parenchyma | 1.43e-13 | 12 |
parenchyma | 1.57e-12 | 15 |
urinary system structure | 7.68e-11 | 47 |
renal system | 1.68e-10 | 48 |
cortex | 2.19e-10 | 15 |
transitional epithelium | 2.60e-08 | 6 |
kidney | 1.60e-07 | 26 |
kidney mesenchyme | 1.60e-07 | 26 |
upper urinary tract | 1.60e-07 | 26 |
kidney rudiment | 1.60e-07 | 26 |
kidney field | 1.60e-07 | 26 |
urothelium | 4.03e-07 | 5 |
female organism | 7.37e-07 | 41 |
renal cortex tubule | 7.48e-07 | 3 |
region of nephron tubule | 7.48e-07 | 3 |
proximal tubule | 7.48e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
female reproductive organ cancer | 1.88e-10 | 27 |
reproductive organ cancer | 1.77e-09 | 29 |
female reproductive endometrioid cancer | 1.40e-07 | 6 |
ovarian cancer | 1.83e-07 | 14 |