FFCP PHASE1:Hg19::chr16:50539857..50539869,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr16:50539857..50539869,+ to FFCP PHASE1:Hg19::chr16:50539857..50539869,+: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr16:50539857..50539869,+ | |||
|coexpression_cluster_id=C127 | |||
|description=CAGE_peak_at_chr16:50539857..50539869,+ | |||
|id=chr16:50539857..50539869,+ | |||
|ontology_enrichment_celltype=CL:0000181!8.92e-12!12;CL:0000417!8.92e-12!12;CL:0000668!8.92e-12!12;CL:0000414!8.92e-12!12;CL:0000412!8.92e-12!12;CL:0000182!8.92e-12!12;CL:0002563!2.08e-09!4;CL:0000223!3.22e-08!59 | |||
|ontology_enrichment_celltype_v019=CL:0000182;8.21e-30;12!CL:0002253;2.32e-12;2!CL:0002178;1.51e-08;3!CL:0002563;8.14e-07;4!CL:0002327;8.85e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,8.52e-30,12;CL:0000223,1.09e-13,58;CL:0002253,2.32e-12,2;CL:0002178,1.51e-08,3;CL:0002563,8.14e-07,4;CL:0002327,8.61e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.82e-32;11!UBERON:0009497;1.45e-27;13!UBERON:0008425;3.67e-23;1!UBERON:0001041;1.49e-18;30!UBERON:0003104;5.83e-18;31!UBERON:0006595;2.01e-07;86!CL:0000223;8.25e-07;58 | |||
|ontology_enrichment_disease=DOID:0050619!3.74e-10!1;DOID:1357!3.74e-10!1;DOID:305!1.90e-09!106;DOID:5409!2.00e-09!4;DOID:0050615!1.16e-08!16 | |||
|ontology_enrichment_disease_v019=DOID:0050619;1.07e-23;1!DOID:1357;1.07e-23;1!DOID:7;8.70e-13;39!DOID:3493;3.62e-12;2!DOID:3119;3.34e-07;14!DOID:5093;8.85e-07;4!DOID:1612;8.85e-07;4!DOID:5409;9.63e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,1.07e-23,1;DOID:1357,1.07e-23,1;DOID:7,2.38e-14,39;DOID:305,4.44e-13,106;DOID:3493,3.62e-12,2;DOID:0050687,1.24e-09,143;DOID:162,2.69e-07,235;DOID:3119,3.34e-07,14;DOID:14566,3.89e-07,239;DOID:5093,8.61e-07,4;DOID:1612,8.61e-07,4;DOID:5409,9.63e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0001764!3.74e-10!1;UBERON:0001825!3.74e-10!1;UBERON:0002426!9.70e-10!1;UBERON:0003831!9.70e-10!1;UBERON:0003898!9.70e-10!1;UBERON:0004830!9.70e-10!1;UBERON:0001774!9.70e-10!1;UBERON:0003830!9.70e-10!1;UBERON:0005175!9.70e-10!1;UBERON:0003897!9.70e-10!1;UBERON:0001103!9.70e-10!1;UBERON:0010084!9.70e-10!1;UBERON:0001242!2.08e-09!4;UBERON:0001262!2.08e-09!4;UBERON:0004786!2.08e-09!4;UBERON:0004808!2.08e-09!4;UBERON:0001277!2.08e-09!4;UBERON:0002336!2.46e-09!1;UBERON:0001018!2.46e-09!1;UBERON:0002473!2.46e-09!1;UBERON:0005340!2.46e-09!1;UBERON:0002316!2.46e-09!1;UBERON:0003544!2.46e-09!1;UBERON:0001020!2.46e-09!1;UBERON:0005970!2.46e-09!1;UBERON:0002437!2.46e-09!1;UBERON:0005911!9.03e-09!82;UBERON:0004921!1.08e-08!129;UBERON:0004185!1.08e-08!129;UBERON:0003350!1.08e-07!5;UBERON:0002107!1.75e-07!19;UBERON:0006925!1.75e-07!19;UBERON:0008836!1.75e-07!19;UBERON:0001872!2.23e-07!5;UBERON:0003929!5.36e-07!54;UBERON:0001007!7.19e-07!155;UBERON:0001555!7.19e-07!155;UBERON:0007026!7.19e-07!155;UBERON:0002365!8.16e-07!31;UBERON:0002330!8.16e-07!31 | |||
|ontology_enrichment_uberon_v019=UBERON:0001764;1.07e-23;1!UBERON:0001825;1.07e-23;1!UBERON:0002107;4.93e-19;19!UBERON:0006925;4.93e-19;19!UBERON:0002365;2.67e-17;31!UBERON:0002330;2.67e-17;31!UBERON:0002423;1.40e-14;25!UBERON:0002368;2.98e-10;33!UBERON:0000949;7.17e-08;43!UBERON:0001052;8.14e-07;4!UBERON:0001242;8.14e-07;4!UBERON:0001262;8.14e-07;4!UBERON:0004786;8.14e-07;4!UBERON:0004808;8.14e-07;4!UBERON:0001277;8.14e-07;4!UBERON:0001911;8.85e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,1.07e-23,1;UBERON:0001825,1.07e-23,1;UBERON:0002107,5.05e-19,19;UBERON:0006925,5.05e-19,19;UBERON:0008836,5.05e-19,19;UBERON:0002365,5.47e-18,31;UBERON:0002330,5.47e-18,31;UBERON:0008835,1.70e-16,22;UBERON:0003894,1.70e-16,22;UBERON:0009854,8.45e-16,23;UBERON:0007499,1.43e-14,25;UBERON:0009497,1.43e-14,25;UBERON:0000015,1.43e-14,25;UBERON:0002423,1.43e-14,25;UBERON:0006235,1.43e-14,25;UBERON:0004161,1.43e-14,25;UBERON:0009856,4.98e-14,26;UBERON:0002368,1.58e-10,35;UBERON:0003929,2.00e-10,54;UBERON:0005911,1.09e-09,82;UBERON:0002530,1.52e-09,59;UBERON:0001041,4.20e-09,87;UBERON:0004921,6.31e-09,118;UBERON:0000949,2.88e-08,45;UBERON:0001007,3.12e-07,145;UBERON:0001555,3.12e-07,145;UBERON:0007026,3.12e-07,145;UBERON:0009569,4.57e-07,112;UBERON:0005172,6.11e-07,54;UBERON:0005173,6.11e-07,54;UBERON:0001052,8.14e-07,4;UBERON:0001242,8.14e-07,4;UBERON:0001262,8.14e-07,4;UBERON:0004786,8.14e-07,4;UBERON:0004808,8.14e-07,4;UBERON:0001277,8.14e-07,4;UBERON:0001911,8.61e-07,4;UBERON:0005333,8.61e-07,4;UBERON:0008425,8.61e-07,4;UBERON:0005311,8.61e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.966875596732978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,5.94727999974131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.2195351430934,0,0,0,0,0,0,0,0.067401132980677,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.82479747637269,10.4781632468607,10.2195664392646,11.2563918236489,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,36.7506585225548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27595303699816,0,0,0,0,0,0,0,0,0.90356865631168,0,2.56636834063345,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0.5290268405154,0,0,0,0,0,0,0,0.26721740526556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.966875596732978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,5.94727999974131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.2195351430934,0,0,0,0,0,0,0,0.067401132980677,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.82479747637269,10.4781632468607,10.2195664392646,11.2563918236489,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,36.7506585225548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27595303699816,0,0,0,0,0,0,0,0,0.90356865631168,0,2.56636834063345,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0.5290268405154,0,0,0,0,0,0,0,0.26721740526556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr16:50539857..50539869,+ | |||
}} | }} |
Latest revision as of 09:29, 25 July 2015
Short description: | p@chr16:50539857..50539869, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:50539857..50539869, + |
Coexpression cluster: | C127_maxillary_small_hepatoblastoma_hepatocellular_alveolar_colon_argyrophil |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 8.52e-30 | 12 |
endodermal cell | 1.09e-13 | 58 |
epithelial cell of large intestine | 2.32e-12 | 2 |
epithelial cell of stomach | 1.51e-08 | 3 |
intestinal epithelial cell | 8.14e-07 | 4 |
mammary gland epithelial cell | 8.61e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 1.07e-23 | 1 |
maxillary sinus cancer | 1.07e-23 | 1 |
disease of anatomical entity | 2.38e-14 | 39 |
carcinoma | 4.44e-13 | 106 |
signet ring cell adenocarcinoma | 3.62e-12 | 2 |
cell type cancer | 1.24e-09 | 143 |
cancer | 2.69e-07 | 235 |
gastrointestinal system cancer | 3.34e-07 | 14 |
disease of cellular proliferation | 3.89e-07 | 239 |
thoracic cancer | 8.61e-07 | 4 |
breast cancer | 8.61e-07 | 4 |
lung small cell carcinoma | 9.63e-07 | 4 |