FFCP PHASE1:Hg19::chr14:71275492..71275543,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:71275492..71275543,+ | |||
|coexpression_cluster_id=C186 | |||
|description=CAGE_peak_at_chr14:71275492..71275543,+ | |description=CAGE_peak_at_chr14:71275492..71275543,+ | ||
|id=chr14:71275492..71275543,+ | |id=chr14:71275492..71275543,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.28e-44!254;CL:0002076!3.95e-17!43;CL:0000223!1.60e-16!59;CL:0002368!1.14e-09!13;CL:0002202!8.59e-07!9;CL:0002632!8.59e-07!9 | |ontology_enrichment_celltype=CL:0000066!1.28e-44!254;CL:0002076!3.95e-17!43;CL:0000223!1.60e-16!59;CL:0002368!1.14e-09!13;CL:0002202!8.59e-07!9;CL:0002632!8.59e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0002076;1.97e-18;42!CL:0002368;7.62e-15;13!CL:1000449;9.41e-11;15!CL:1000497;1.37e-10;17!CL:0002518;1.37e-10;17!CL:0002681;7.91e-10;12!CL:0002584;7.91e-10;12!CL:1000507;9.88e-10;10!CL:1000494;9.88e-10;10!CL:0002202;1.00e-09;9!CL:0002632;1.00e-09;9!CL:0002251;1.20e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.38e-49,253;CL:0002076,6.56e-25,42;CL:0000223,5.23e-20,58;CL:0002368,1.14e-14,13;CL:1000449,1.04e-10,15;CL:1000497,1.38e-10,17;CL:0002518,1.38e-10,17;CL:1000507,8.91e-10,10;CL:1000494,8.91e-10,10;CL:0002681,9.94e-10,12;CL:0002584,9.94e-10,12;CL:0002202,1.54e-09,9;CL:0002632,1.54e-09,9;CL:0000076,9.12e-08,63;CL:0002251,1.16e-07,20 | |||
|ontology_enrichment_development_v019=CL:0000223;9.12e-11;58 | |||
|ontology_enrichment_disease=DOID:305!6.32e-29!106;DOID:0050687!5.42e-22!143;DOID:14566!3.35e-16!239;DOID:162!4.07e-16!235;DOID:1749!9.70e-08!14;DOID:299!1.59e-07!25;DOID:7!3.70e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.84e-12;14!DOID:299;2.95e-08;25!DOID:305;9.77e-07;106 | |||
|ontology_enrichment_disease_v019_2=DOID:305,7.07e-21,106;DOID:0050687,1.40e-13,143;DOID:1749,9.91e-13,14;DOID:299,3.99e-08,25;DOID:162,4.34e-07,235;DOID:14566,5.69e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.48e-14!169;UBERON:0000925!2.48e-14!169;UBERON:0006595!2.48e-14!169;UBERON:0000065!4.52e-12!53;UBERON:0001004!1.84e-11!72;UBERON:0000064!8.65e-11!219;UBERON:0001007!3.78e-10!155;UBERON:0001555!3.78e-10!155;UBERON:0007026!3.78e-10!155;UBERON:0001041!5.43e-10!98;UBERON:0000077!6.39e-10!130;UBERON:0008947!1.09e-09!38;UBERON:0003258!1.09e-09!38;UBERON:0000072!1.12e-09!46;UBERON:0005911!1.38e-09!82;UBERON:0004921!2.68e-09!129;UBERON:0004185!2.68e-09!129;UBERON:0000063!3.45e-09!97;UBERON:0005177!4.58e-09!107;UBERON:0000466!2.67e-08!126;UBERON:0006554!2.74e-08!44;UBERON:0005153!2.85e-08!37;UBERON:0000464!3.87e-08!104;UBERON:0001008!8.03e-08!45;UBERON:0001048!2.47e-07!168;UBERON:0005178!3.29e-07!34;UBERON:0002224!3.29e-07!34;UBERON:0001032!8.74e-07!24;UBERON:0004456!8.74e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0006554;3.36e-11;30!UBERON:0001008;3.36e-11;30!UBERON:0006555;9.41e-11;15!UBERON:0004819;9.41e-11;15!UBERON:0001285;9.41e-11;15!UBERON:0007684;9.41e-11;15!UBERON:0001851;2.52e-10;15!UBERON:0001225;7.91e-10;12!UBERON:0008987;7.91e-10;12!UBERON:0004211;9.88e-10;10!UBERON:0009773;9.88e-10;10!UBERON:0001231;9.88e-10;10!UBERON:0004810;9.88e-10;10!UBERON:0002113;1.62e-07;24!UBERON:0011143;1.62e-07;24!UBERON:0000353;2.43e-07;15!UBERON:0000365;4.75e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,5.01e-12,160;UBERON:0000925,5.01e-12,160;UBERON:0006595,5.01e-12,160;UBERON:0006554,9.88e-12,47;UBERON:0001008,2.51e-11,48;UBERON:0004211,1.04e-10,15;UBERON:0009773,1.04e-10,15;UBERON:0001231,1.04e-10,15;UBERON:0001285,1.04e-10,15;UBERON:0007684,1.04e-10,15;UBERON:0004208,1.04e-10,15;UBERON:0001851,4.80e-10,15;UBERON:0006555,7.88e-10,16;UBERON:0004819,7.88e-10,16;UBERON:0004810,8.91e-10,10;UBERON:0001225,9.94e-10,12;UBERON:0008987,9.94e-10,12;UBERON:0001004,1.21e-09,74;UBERON:0000033,6.30e-08,56;UBERON:0000065,1.08e-07,54;UBERON:0001007,2.22e-07,145;UBERON:0001555,2.22e-07,145;UBERON:0007026,2.22e-07,145;UBERON:0000353,2.88e-07,15;UBERON:0000153,3.17e-07,62;UBERON:0007811,3.17e-07,62;UBERON:0001444,3.56e-07,49;UBERON:0000365,5.34e-07,5;UBERON:0005911,6.52e-07,82;UBERON:0002113,9.55e-07,26;UBERON:0003918,9.55e-07,26;UBERON:0011143,9.55e-07,26;UBERON:0005095,9.55e-07,26;UBERON:0007687,9.55e-07,26 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,2.21160542851358,4.18680700783456,0.655324116390517,0.527533956456907,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0.286235987131057,0.273748850145768,0.502170558379211,0.0764134057479513,0.164201178899891,0.236132343941038,0,0,0,8.27479102031034,5.4217065380085,10.3531122846701,0,0,0,0,0.601633342410425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.852449501065388,0,0,0.622822248995575,0,0,0,0,0,0.316462387440884,0,0,0,0.336985893439485,0.150176892841506,0,0,0,0,0,0,1.77901850772711,1.70692089026603,0.800791974072025,0.574752439954483,0.661044872784862,0.954053754535364,0,0,0.382273228125229,0,0,0,0.590129310341499,0.393010762749165,1.43921049299656,0,0.32592226663359,0,1.94826728407911,0.334231370655521,0.294605907474837,1.10766947291811,0.541607727530031,0.25618263945135,0.520237390239513,0.822189523018381,0.552700035571697,0.289803085735052,0.593146252648242,0,0,0.226618685395132,0.383220493601921,0.68725489096526,0.253019692019503,0.318565414324097,0,0,0.301150238155546,0.383959833463255,0,0.236777252044017,0,1.20964045934839,1.06976078313403,0.868946423296794,0,0,0,0,0,0,0,0,0.378139268656271,2.21729397462564,0.87834785693126,0.458426764241994,5.10013403609559,1.85392221392215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.61656431285521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,9.46978180500154,4.09119180886252,22.0839538449533,1.34171076742555,0.927708378250397,1.16193942869518,1.34759371519982,1.00928340350251,0,0,0,0,0,0,0.591534000199219,1.01150814046861,0.482022059766964,1.65440959098591,0.653638332277218,0.71181185733329,2.02246962240247,0.98110732562673,1.53898862778556,0,0,0,0,0,0,0.590789906681404,1.32438929824395,0.491953754172454,2.23038153388083,1.31700342490351,4.49607013030478,0.703702806881416,0.925884451585296,0,0,1.44331342025273,0.695582429850461,0.939269553886573,0,0,0.190254152234598,1.58040879591855,2.57545848628462,0,0,0,3.74935335947108,2.18376766658517,3.54437743105966,11.3739323832617,19.1818399419215,8.05103626246943,0.985326475791887,0.088048434013226,0,0.288239906833923,1.00993946741104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.63166629531089,7.84380112740265,6.79816340037988,0,0,0,0,0,0,0,0,0.179060963239896,0.112085143993527,0.788123040807709,1.94064817373566,1.15508732651774,0.76228387266739,1.30139853857622,0,0,0,0,0,0,0,1.00034104211935,0.271265023699736,0.415941723061614,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0.413536052245775,0.431428401637234,0.213455115606889,1.5156378572313,1.66435439510497,1.20956117331872,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0.483437798366489,27.0683734909435,4.51196845785892,0.114814448164607,0,0,3.15839729035188,1.30926073077505,2.35304930753057,2.92278449306521,0.844413031143006,0,0,2.15915916102139,3.08454505380579,3.52230368807009,5.51858751240339,2.80363900349542,4.15538004464362,4.70136984916574,0,0,2.05160100093111,1.31205858279882,1.62689197332152,0.103041011647722,0,0,1.14853107599234,1.95018073810956,0,0,0,0,0,0,0,0.255679882248303,0,5.95025695299521,5.76570202095319,12.2508203994801,8.39609581101064,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0.471249609382746,0.404364963146632,0,0,0.975267478179181,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0.349934720244983,4.52243929809907,25.4714864703599,1.08890984861323,0.282431402330337,8.6101074534246,5.05414427002877,2.66058092122005,4.36474460393223,0,0,0,0,0,0,0,0,0.961416640147258,1.92495971052672,1.71528151186722,0.557409525377156,0,0.924843963529383,0.637705090915289,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0.19538809540204,0,0,0,0,0,3.36852972734796,0,1.21360521749513,0,0.568272293612826,0.47748896947538,0,0.307160702099232,0,0,1.22439575525196,0.824019371133798,0,0,0.276283915531148,0.251932747854276,0.613612095012929,0.123084805461069,0,1.88723537409386,1.07412704805365,0,0,0,0,0,0.185536196323703,0,0.7812832832557,0.437299999980979,0,8.53450862141247,10.1701460117107,0.236387681767936,0,0.291604613383254,1.04174996959975,0,0.241192877250816,1.52581736317083,0.663475559587348,1.18219047581419,0.658156191461918,0.435753854075961,2.23077990845765,0.461701551022782,0.683652335082007,0,0.359030577639089,0.434589487688032,0,0.457987967009312,0,0,0,0,0,0,0,0,0,1.26598838716816,3.26465616318295,1.41353071433941,0,0,0.176915129006678,1.22206028986725,0,0,0,0.202203398942031,0,0,0.547364367646998,1.36965233252463,0.485560759068186,0,0,0.30607276163049,0.063186579628488,0.60129367765797,0.518440956986236,0.664653872707185,0.992975867626496,0.941798755221676,0,3.69992409838731,0.138674673013139,1.04135843001079,16.2667379707867,6.9647365264322,0,0.859930162358083,0.0967563312890851,0.584714536689484,0.492692742319255,3.9765496760252,0.176512253383001,0.451961481561065,11.7856055196206,0.19871461170299,0.379864775735272,0.782205530939212,4.24841747333129,0.21345299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|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,2.21160542851358,4.18680700783456,0.655324116390517,0.527533956456907,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0.286235987131057,0.273748850145768,0.502170558379211,0.0764134057479513,0.164201178899891,0.236132343941038,0,0,0,8.27479102031034,5.4217065380085,10.3531122846701,0,0,0,0,0.601633342410425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.852449501065388,0,0,0.622822248995575,0,0,0,0,0,0.316462387440884,0,0,0,0.336985893439485,0.150176892841506,0,0,0,0,0,0,1.77901850772711,1.70692089026603,0.800791974072025,0.574752439954483,0.661044872784862,0.954053754535364,0,0,0.382273228125229,0,0,0,0.590129310341499,0.393010762749165,1.43921049299656,0,0.32592226663359,0,1.94826728407911,0.334231370655521,0.294605907474837,1.10766947291811,0.541607727530031,0.25618263945135,0.520237390239513,0.822189523018381,0.552700035571697,0.289803085735052,0.593146252648242,0,0,0.226618685395132,0.383220493601921,0.68725489096526,0.253019692019503,0.318565414324097,0,0,0.301150238155546,0.383959833463255,0,0.236777252044017,0,1.20964045934839,1.06976078313403,0.868946423296794,0,0,0,0,0,0,0,0,0.378139268656271,2.21729397462564,0.87834785693126,0.458426764241994,5.10013403609559,1.85392221392215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.61656431285521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,9.46978180500154,4.09119180886252,22.0839538449533,1.34171076742555,0.927708378250397,1.16193942869518,1.34759371519982,1.00928340350251,0,0,0,0,0,0,0.591534000199219,1.01150814046861,0.482022059766964,1.65440959098591,0.653638332277218,0.71181185733329,2.02246962240247,0.98110732562673,1.53898862778556,0,0,0,0,0,0,0.590789906681404,1.32438929824395,0.491953754172454,2.23038153388083,1.31700342490351,4.49607013030478,0.703702806881416,0.925884451585296,0,0,1.44331342025273,0.695582429850461,0.939269553886573,0,0,0.190254152234598,1.58040879591855,2.57545848628462,0,0,0,3.74935335947108,2.18376766658517,3.54437743105966,11.3739323832617,19.1818399419215,8.05103626246943,0.985326475791887,0.088048434013226,0,0.288239906833923,1.00993946741104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.63166629531089,7.84380112740265,6.79816340037988,0,0,0,0,0,0,0,0,0.179060963239896,0.112085143993527,0.788123040807709,1.94064817373566,1.15508732651774,0.76228387266739,1.30139853857622,0,0,0,0,0,0,0,1.00034104211935,0.271265023699736,0.415941723061614,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0.413536052245775,0.431428401637234,0.213455115606889,1.5156378572313,1.66435439510497,1.20956117331872,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0.483437798366489,27.0683734909435,4.51196845785892,0.114814448164607,0,0,3.15839729035188,1.30926073077505,2.35304930753057,2.92278449306521,0.844413031143006,0,0,2.15915916102139,3.08454505380579,3.52230368807009,5.51858751240339,2.80363900349542,4.15538004464362,4.70136984916574,0,0,2.05160100093111,1.31205858279882,1.62689197332152,0.103041011647722,0,0,1.14853107599234,1.95018073810956,0,0,0,0,0,0,0,0.255679882248303,0,5.95025695299521,5.76570202095319,12.2508203994801,8.39609581101064,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0.471249609382746,0.404364963146632,0,0,0.975267478179181,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0.349934720244983,4.52243929809907,25.4714864703599,1.08890984861323,0.282431402330337,8.6101074534246,5.05414427002877,2.66058092122005,4.36474460393223,0,0,0,0,0,0,0,0,0.961416640147258,1.92495971052672,1.71528151186722,0.557409525377156,0,0.924843963529383,0.637705090915289,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0.19538809540204,0,0,0,0,0,3.36852972734796,0,1.21360521749513,0,0.568272293612826,0.47748896947538,0,0.307160702099232,0,0,1.22439575525196,0.824019371133798,0,0,0.276283915531148,0.251932747854276,0.613612095012929,0.123084805461069,0,1.88723537409386,1.07412704805365,0,0,0,0,0,0.185536196323703,0,0.7812832832557,0.437299999980979,0,8.53450862141247,10.1701460117107,0.236387681767936,0,0.291604613383254,1.04174996959975,0,0.241192877250816,1.52581736317083,0.663475559587348,1.18219047581419,0.658156191461918,0.435753854075961,2.23077990845765,0.461701551022782,0.683652335082007,0,0.359030577639089,0.434589487688032,0,0.457987967009312,0,0,0,0,0,0,0,0,0,1.26598838716816,3.26465616318295,1.41353071433941,0,0,0.176915129006678,1.22206028986725,0,0,0,0.202203398942031,0,0,0.547364367646998,1.36965233252463,0.485560759068186,0,0,0.30607276163049,0.063186579628488,0.60129367765797,0.518440956986236,0.664653872707185,0.992975867626496,0.941798755221676,0,3.69992409838731,0.138674673013139,1.04135843001079,16.2667379707867,6.9647365264322,0,0.859930162358083,0.0967563312890851,0.584714536689484,0.492692742319255,3.9765496760252,0.176512253383001,0.451961481561065,11.7856055196206,0.19871461170299,0.379864775735272,0.782205530939212,4.24841747333129,0.21345299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| ||
|short_description=p@chr14:71275492..71275543,+ | |short_description=p@chr14:71275492..71275543,+ | ||
}} | }} |
Latest revision as of 22:24, 24 July 2015
Short description: | p@chr14:71275492..71275543, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:71275492..71275543, + |
Coexpression cluster: | C186_squamous_papillotubular_large_Tracheal_oral_Small_epidermoid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.38e-49 | 253 |
endo-epithelial cell | 6.56e-25 | 42 |
endodermal cell | 5.23e-20 | 58 |
respiratory epithelial cell | 1.14e-14 | 13 |
epithelial cell of nephron | 1.04e-10 | 15 |
kidney cell | 1.38e-10 | 17 |
kidney epithelial cell | 1.38e-10 | 17 |
kidney tubule cell | 8.91e-10 | 10 |
nephron tubule epithelial cell | 8.91e-10 | 10 |
kidney cortical cell | 9.94e-10 | 12 |
renal cortical epithelial cell | 9.94e-10 | 12 |
epithelial cell of tracheobronchial tree | 1.54e-09 | 9 |
epithelial cell of lower respiratory tract | 1.54e-09 | 9 |
squamous epithelial cell | 9.12e-08 | 63 |
epithelial cell of alimentary canal | 1.16e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 5.01e-12 | 160 |
endoderm | 5.01e-12 | 160 |
presumptive endoderm | 5.01e-12 | 160 |
urinary system structure | 9.88e-12 | 47 |
renal system | 2.51e-11 | 48 |
nephron epithelium | 1.04e-10 | 15 |
renal tubule | 1.04e-10 | 15 |
nephron tubule | 1.04e-10 | 15 |
nephron | 1.04e-10 | 15 |
uriniferous tubule | 1.04e-10 | 15 |
nephrogenic mesenchyme | 1.04e-10 | 15 |
cortex | 4.80e-10 | 15 |
excretory tube | 7.88e-10 | 16 |
kidney epithelium | 7.88e-10 | 16 |
nephron tubule epithelium | 8.91e-10 | 10 |
cortex of kidney | 9.94e-10 | 12 |
renal parenchyma | 9.94e-10 | 12 |
respiratory system | 1.21e-09 | 74 |
head | 6.30e-08 | 56 |
respiratory tract | 1.08e-07 | 54 |
digestive system | 2.22e-07 | 145 |
digestive tract | 2.22e-07 | 145 |
primitive gut | 2.22e-07 | 145 |
parenchyma | 2.88e-07 | 15 |
anterior region of body | 3.17e-07 | 62 |
craniocervical region | 3.17e-07 | 62 |
subdivision of head | 3.56e-07 | 49 |
urothelium | 5.34e-07 | 5 |
endo-epithelium | 6.52e-07 | 82 |
kidney | 9.55e-07 | 26 |
kidney mesenchyme | 9.55e-07 | 26 |
upper urinary tract | 9.55e-07 | 26 |
kidney rudiment | 9.55e-07 | 26 |
kidney field | 9.55e-07 | 26 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 7.07e-21 | 106 |
cell type cancer | 1.40e-13 | 143 |
squamous cell carcinoma | 9.91e-13 | 14 |
adenocarcinoma | 3.99e-08 | 25 |
cancer | 4.34e-07 | 235 |
disease of cellular proliferation | 5.69e-07 | 239 |