FFCP PHASE1:Hg19::chr13:111118370..111118403,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:111118370..111118403,- | |||
|coexpression_cluster_id=C823 | |coexpression_cluster_id=C823 | ||
|description=CAGE_peak_at_chr13:111118370..111118403,- | |description=CAGE_peak_at_chr13:111118370..111118403,- | ||
|id=chr13:111118370..111118403,- | |id=chr13:111118370..111118403,- | ||
|ontology_enrichment_celltype=CL:0000055!1.31e-15!180;CL:0000222!1.05e-13!119;CL:0000183!7.79e-12!59;CL:0000680!6.02e-10!57;CL:0000056!6.02e-10!57;CL:0000355!6.02e-10!57;CL:0000187!2.23e-09!54;CL:0000393!2.10e-08!60;CL:0000211!2.10e-08!60;CL:0000057!9.41e-08!75;CL:0000192!1.49e-07!42;CL:0000514!1.49e-07!42;CL:0000220!4.17e-07!246;CL:0002321!4.21e-07!248;CL:1000449!6.31e-07!16 | |ontology_enrichment_celltype=CL:0000055!1.31e-15!180;CL:0000222!1.05e-13!119;CL:0000183!7.79e-12!59;CL:0000680!6.02e-10!57;CL:0000056!6.02e-10!57;CL:0000355!6.02e-10!57;CL:0000187!2.23e-09!54;CL:0000393!2.10e-08!60;CL:0000211!2.10e-08!60;CL:0000057!9.41e-08!75;CL:0000192!1.49e-07!42;CL:0000514!1.49e-07!42;CL:0000220!4.17e-07!246;CL:0002321!4.21e-07!248;CL:1000449!6.31e-07!16 | ||
|ontology_enrichment_celltype_v019=CL:1000449;1.22e-13;15!CL:1000497;1.03e-11;17!CL:0002518;1.03e-11;17!CL:0002681;2.72e-09;12!CL:0002584;2.72e-09;12!CL:1000507;8.33e-09;10!CL:1000494;8.33e-09;10!CL:1000746;6.25e-07;7!CL:1000612;6.25e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:1000449,7.64e-14,15;CL:1000497,6.89e-12,17;CL:0002518,6.89e-12,17;CL:0002681,2.50e-09,12;CL:0002584,2.50e-09,12;CL:1000507,5.07e-09,10;CL:1000494,5.07e-09,10;CL:1000746,6.51e-07,7;CL:1000612,6.51e-07,7 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0006555;1.22e-13;15!UBERON:0004819;1.22e-13;15!UBERON:0001285;1.22e-13;15!UBERON:0007684;1.22e-13;15!UBERON:0001225;2.72e-09;12!UBERON:0008987;2.72e-09;12!UBERON:0000353;3.43e-09;15!UBERON:0004211;8.33e-09;10!UBERON:0009773;8.33e-09;10!UBERON:0001231;8.33e-09;10!UBERON:0004810;8.33e-09;10!UBERON:0002113;1.55e-07;24!UBERON:0011143;1.55e-07;24!UBERON:0001851;4.07e-07;15!UBERON:0000074;6.25e-07;7!UBERON:0001229;6.25e-07;7 | |||
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| ||
|short_description=p@chr13:111118370..111118403,- | |short_description=p@chr13:111118370..111118403,- | ||
}} | }} |
Latest revision as of 14:32, 24 July 2015
Short description: | p@chr13:111118370..111118403, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:111118370..111118403, - |
Coexpression cluster: | C823_Fibroblast_Endothelial_hepatic_Pericytes_umbilical_Adipocyte_Lymphatic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of nephron | 7.64e-14 | 15 |
kidney cell | 6.89e-12 | 17 |
kidney epithelial cell | 6.89e-12 | 17 |
kidney cortical cell | 2.50e-09 | 12 |
renal cortical epithelial cell | 2.50e-09 | 12 |
kidney tubule cell | 5.07e-09 | 10 |
nephron tubule epithelial cell | 5.07e-09 | 10 |
glomerular cell | 6.51e-07 | 7 |
kidney corpuscule cell | 6.51e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
nephron epithelium | 7.64e-14 | 15 |
renal tubule | 7.64e-14 | 15 |
nephron tubule | 7.64e-14 | 15 |
nephron | 7.64e-14 | 15 |
uriniferous tubule | 7.64e-14 | 15 |
nephrogenic mesenchyme | 7.64e-14 | 15 |
excretory tube | 8.37e-13 | 16 |
kidney epithelium | 8.37e-13 | 16 |
vasculature | 1.10e-10 | 78 |
vascular system | 1.10e-10 | 78 |
epithelial tube | 1.62e-10 | 117 |
cortex of kidney | 2.50e-09 | 12 |
renal parenchyma | 2.50e-09 | 12 |
parenchyma | 3.20e-09 | 15 |
nephron tubule epithelium | 5.07e-09 | 10 |
circulatory system | 1.11e-08 | 112 |
cardiovascular system | 2.27e-08 | 109 |
vessel | 3.38e-07 | 68 |
cortex | 3.81e-07 | 15 |
abdominal segment of trunk | 6.01e-07 | 60 |
abdomen | 6.01e-07 | 60 |
primitive nephron | 6.51e-07 | 7 |
renal glomerulus | 6.51e-07 | 7 |
renal corpuscle | 6.51e-07 | 7 |
glomerular capsule | 6.51e-07 | 7 |
metanephric mesenchyme | 6.51e-07 | 7 |
glomerular tuft | 6.51e-07 | 7 |
S-shaped body | 6.51e-07 | 7 |
renal vesicle | 6.51e-07 | 7 |
comma-shaped body | 6.51e-07 | 7 |
kidney | 7.16e-07 | 26 |
kidney mesenchyme | 7.16e-07 | 26 |
upper urinary tract | 7.16e-07 | 26 |
kidney rudiment | 7.16e-07 | 26 |
kidney field | 7.16e-07 | 26 |