FFCP PHASE1:Hg19::chr13:108298023..108298029,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr13:108298023..108298029,- to FFCP PHASE1:Hg19::chr13:108298023..108298029,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr13:108298023..108298029,- | |||
|description=CAGE_peak_at_chr13:108298023..108298029,- | |||
|id=chr13:108298023..108298029,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000054;7.47e-07;2!CL:0000137;7.47e-07;2!CL:0000092;7.47e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000054,8.57e-07,2;CL:0000137,8.57e-07,2;CL:0000092,8.57e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.48e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:200;7.47e-07;2!DOID:4305;7.47e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:200,8.57e-07,2;DOID:4305,8.57e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0001049!2.61e-35!57;UBERON:0005068!2.61e-35!57;UBERON:0006241!2.61e-35!57;UBERON:0007135!2.61e-35!57;UBERON:0000073!8.79e-32!94;UBERON:0001016!8.79e-32!94;UBERON:0002780!1.02e-30!41;UBERON:0001890!1.02e-30!41;UBERON:0006240!1.02e-30!41;UBERON:0003080!1.28e-29!42;UBERON:0001017!5.71e-29!82;UBERON:0002616!1.05e-28!59;UBERON:0005743!1.69e-28!86;UBERON:0003075!1.34e-27!86;UBERON:0007284!1.34e-27!86;UBERON:0000955!1.47e-27!69;UBERON:0006238!1.47e-27!69;UBERON:0002020!1.10e-25!34;UBERON:0003528!1.10e-25!34;UBERON:0002346!2.27e-25!90;UBERON:0001893!1.98e-24!34;UBERON:0003056!4.72e-24!61;UBERON:0002791!7.47e-24!33;UBERON:0001869!8.08e-24!32;UBERON:0002619!1.72e-19!22;UBERON:0000956!2.06e-19!25;UBERON:0000203!2.06e-19!25;UBERON:0001950!1.76e-17!20;UBERON:0000033!2.27e-16!123;UBERON:0004121!1.12e-15!169;UBERON:0000153!2.37e-15!129;UBERON:0007811!2.37e-15!129;UBERON:0000924!9.64e-15!173;UBERON:0006601!9.64e-15!173;UBERON:0007023!8.25e-13!115;UBERON:0004111!5.66e-09!241;UBERON:0000025!7.68e-09!194;UBERON:0001871!1.15e-08!7;UBERON:0000483!3.66e-08!309;UBERON:0000119!7.85e-08!312;UBERON:0002420!8.42e-08!9;UBERON:0007245!8.42e-08!9;UBERON:0010009!8.42e-08!9;UBERON:0010011!8.42e-08!9;UBERON:0000454!8.42e-08!9;UBERON:0001894!8.99e-08!7;UBERON:0006222!8.99e-08!7;UBERON:0002308!1.06e-07!9;UBERON:0000125!1.06e-07!9;UBERON:0000991!1.16e-07!21;UBERON:0009196!1.16e-07!21;UBERON:0009117!1.16e-07!21;UBERON:0005564!1.16e-07!21;UBERON:0000477!1.19e-07!286;UBERON:0003076!3.83e-07!15;UBERON:0003057!3.83e-07!15;UBERON:0004176!4.22e-07!22;UBERON:0000064!9.59e-07!219;UBERON:0000475!9.95e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;8.21e-35;22!UBERON:0000956;2.98e-30;25!UBERON:0000203;2.98e-30;25!UBERON:0001950;1.36e-29;20!UBERON:0003528;2.47e-28;34!UBERON:0002020;2.47e-28;34!UBERON:0002791;3.19e-26;32!UBERON:0001869;3.41e-26;32!UBERON:0002780;2.59e-24;41!UBERON:0001890;2.59e-24;41!UBERON:0001893;5.87e-22;34!UBERON:0000073;1.61e-19;53!UBERON:0002616;1.61e-19;53!UBERON:0001017;1.53e-13;75!UBERON:0001016;2.83e-12;83!UBERON:0000955;5.58e-12;68!UBERON:0001871;4.58e-11;6!UBERON:0000349;1.59e-10;5!UBERON:0002021;2.04e-10;5!UBERON:0001870;2.70e-09;3!UBERON:0002298;4.87e-08;6!UBERON:0004732;1.27e-07;13!UBERON:0000007;1.27e-07;2!UBERON:0003296;1.29e-07;4!UBERON:0010133;1.29e-07;4!UBERON:0001876;1.71e-07;2!UBERON:0001954;2.41e-07;2!UBERON:0003022;2.41e-07;2!UBERON:0002421;2.41e-07;2!UBERON:0002600;2.41e-07;2!UBERON:0001894;2.70e-07;7!UBERON:0002148;3.37e-07;2!UBERON:0006331;3.37e-07;2!UBERON:0009662;3.37e-07;2!UBERON:0002702;7.47e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,3.14e-37,56;UBERON:0005068,3.14e-37,56;UBERON:0006241,3.14e-37,56;UBERON:0007135,3.14e-37,56;UBERON:0000073,6.61e-37,53;UBERON:0002616,6.61e-37,53;UBERON:0002619,6.75e-35,22;UBERON:0003528,3.99e-33,34;UBERON:0002020,3.99e-33,34;UBERON:0002780,1.36e-32,41;UBERON:0001890,1.36e-32,41;UBERON:0003080,1.36e-32,41;UBERON:0006240,1.36e-32,41;UBERON:0000955,2.80e-31,68;UBERON:0006238,2.80e-31,68;UBERON:0001016,5.87e-31,89;UBERON:0000956,2.51e-30,25;UBERON:0000203,2.51e-30,25;UBERON:0001950,1.05e-29,20;UBERON:0001017,6.80e-29,81;UBERON:0002791,1.38e-28,32;UBERON:0001869,1.38e-28,32;UBERON:0003075,8.06e-27,82;UBERON:0007284,8.06e-27,82;UBERON:0001893,1.19e-26,34;UBERON:0002346,3.39e-25,86;UBERON:0003056,4.66e-24,61;UBERON:0010371,1.95e-19,104;UBERON:0010314,1.94e-18,132;UBERON:0011216,1.47e-17,223;UBERON:0004121,6.57e-14,171;UBERON:0000924,6.57e-14,171;UBERON:0006601,6.57e-14,171;UBERON:0007023,4.93e-12,114;UBERON:0001871,3.52e-11,6;UBERON:0000025,4.85e-11,192;UBERON:0000349,1.56e-10,5;UBERON:0002021,3.44e-10,5;UBERON:0001870,1.98e-09,3;UBERON:0004111,4.23e-09,240;UBERON:0000483,1.24e-08,306;UBERON:0000119,1.89e-08,309;UBERON:0002298,4.63e-08,6;UBERON:0000007,1.18e-07,2;UBERON:0003296,1.19e-07,4;UBERON:0010133,1.19e-07,4;UBERON:0004732,1.22e-07,13;UBERON:0001876,1.52e-07,2;UBERON:0001894,2.50e-07,7;UBERON:0006222,2.50e-07,7;UBERON:0001954,2.66e-07,2;UBERON:0003022,2.66e-07,2;UBERON:0002421,2.66e-07,2;UBERON:0002600,2.66e-07,2;UBERON:0002148,3.39e-07,2;UBERON:0006331,3.39e-07,2;UBERON:0009662,3.39e-07,2;UBERON:0002702,4.07e-07,2 | |||
|phase1_expression=0.363356758541113,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0.286235987131057,0,0.627713197974014,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.443458794925128,0.351339142772504,0.196468613246569,0,0,0,0,0,0,0,0,0.596287222100115,0,0,0,0,0,0,0.516833518338658,0.35576626268671,0.33472061276467,0,0,0,0,0,0.267899184852239,0,0.337834441449967,0,0,0.183201743930407,0,0,0,0.496971951695318,0,0.264818361626438,0,0,0,0,0,0,0.134710672069688,0.326923806226917,0,0,0,0,0,0,0,0,0,0.204154171254893,1.22834317311768,0.103325781175765,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0.515281080091258,0,0.337552664482532,0.0974370051611986,0.252433774244115,0,0.161646056818812,0,0.10075209822764,0,0,0,0,0.121973706129595,0.265059536642971,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.234817388471643,0,0,1.14152491340759,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03417372606222,0,0,0.531876233169741,1.04007436911366,0,0,0,0.428933980974443,0.542621605391443,0,0,0,0,1.80863626235752,0,0.399891964728228,0,0,0,0,0,0,0.868687840005475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0.767309866440312,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0.229628896329213,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0.096670718292122,0.616194468458578,0.460511024178389,0.137836572484531,0.214840489736547,0,0.0852266274161009,0,0,0,0,0,0,4.40737285562896,0,0,0,0,0,0.286249773483982,0,0,0,0,0,0,0,1.43897966066652,0.274537029736055,0.235624804691373,0,0,0,0,0.243713489631284,0,0.9554993798559,0.565621727814851,0,0,0,0,0,0,0.202910376962704,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.97659059106519,3.37606599385231,1.66963057534359,0,1.05562704063997,0,0,0,0,0,1.24415835064723,0,0,0,0,0,0,0,0.834912883456661,0,0,0,0,0,0,0.236387681767936,0,0,3.29887490373255,0.885741385813839,0.361789315876224,0,3.20679853800551,0.295547618953547,1.09692698576986,0,0,0,2.39278317278703,0.23056390438806,0,0.760531603454056,0,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0.632994193584081,0,0,0,0,0,0,1.48260564340311,0.247127877893006,0.208843899010911,0.067401132980677,2.40773294189637,0.937057782901357,0,0.19566461893209,0,0,2.41981432097328,1.53036380815245,0.126373159256976,0,0,0,0.330991955875499,0,0,0,0.138674673013139,0,0,0,0.17472666824203,0,0,0,0,0,0.0882561266915003,0.90392296312213,0.548167698587004,2.58328995213887,1.13959432720582,0,0.561111741760736,0.640358984218058,0.39961921916426,0,0,0,0,0.248505071130865,0,0.135904206073614,0,0.203996435272644,0,1.20084057741958,0.136905378891993,0,1.71906176567983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38568906942791,3.40508515278939,0.160753148465019,0.412618309791701,0.415440338029185,0,0,0.303747783290123,0,0,0,0.739202355635845,1.43429871466276,0,0,0,0,0,0,0,0,0.082092520749339,2.21504428321048,0,0,0,2.84422503995411,2.11572162788304,0,0,0,9.27505400088029,0,0,0,0,0,0,0,0,0,0.157054096250234,1.77213635993397,0.854183854313742,2.754200475543,1.72022758707021,1.10929051536852,0.124192805882767,3.45871587340577,0,0,0,0,0,0,0,0,0,0.189403005275089,0.754703705257725,0,0,0.302461847526478,0,0,0.63718706865481,0,0.310525913752519,0,1.06336685823198,0,0.601030435988874,0.761610424337591,0.813741466409323,1.27294061441792,0.859284456339908,0.464033759878494,0.398095888698616,0,0,0,0,0,0.857766365499703,0.260994291965212,0.226705925512272,0.231522474323834,0.244736704506468,0.179088841081487,0,0.219284049578707,0.530067437837643,0.192914038270915,0,0.512483037175893,0,0,4.70078682915885,0,0,0,0,0,0.633936370075881,0,0,0,0,0,0,0,1.91841556955478,0.646948868380091,0,1.31051565830417,0,0,0,0,0.318004350653419,0,2.40171224485641,0,0.3062454773532,0.449604575675217,4.25089728976755,5.58718506700029,1.02558182120378,3.27693205088234,0,3.06803726700517,1.42769420259154,0,0.11796972334774,0,0,1.1441462864015,0.690359926060101,0,0,0,0,0,1.14640342257068,0.739280431085226,0.405225507710368,1.56215619722769,4.96048311602842,0.380494861163441,8.75159694429151,0,0,0,0,0.535701835878287,1.3451348888753,5.46269043812968,3.87025725297206,0.177404740325278,0,0,0.747667062745149,0.263091094251396,0,0.333694205676207,0,1.09980912941201,0,2.73947616152849,0,0,0.0714765441766563,1.73814972905999,0,0,0.801711364730253,0,0,0,0,0.236664001461131,0.170426809518315,0.846774100381858,0,0.31020638566432,0,1.67783147696688,0,0.731507549893617,0,0,0,0,0,0,1.30812099855325,0,0.219881033490858,2.56636834063345,0.154348316215889,0.655678681511872,0,0.490296643507811,0.471353094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| ||
|short_description=p@chr13:108298023..108298029,- | |||
}} | }} |
Latest revision as of 14:23, 24 July 2015
Short description: | p@chr13:108298023..108298029, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:108298023..108298029, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone matrix secreting cell | 8.57e-07 | 2 |
osteocyte | 8.57e-07 | 2 |
osteoclast | 8.57e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
giant cell tumor | 8.57e-07 | 2 |
bone giant cell tumor | 8.57e-07 | 2 |