FFCP PHASE1:Hg19::chr12:23773763..23773766,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:23773763..23773766,- | |||
|coexpression_cluster_id=C33 | |||
|description=CAGE_peak_at_chr12:23773763..23773766,- | |description=CAGE_peak_at_chr12:23773763..23773766,- | ||
|id=chr12:23773763..23773766,- | |id=chr12:23773763..23773766,- | ||
|ontology_enrichment_celltype=CL:0000764!4.27e-14!2;CL:0000765!4.27e-14!2;CL:0000050!4.27e-14!2;CL:0000038!4.27e-14!2;CL:0000558!4.27e-14!2;CL:0000547!4.27e-14!2;CL:0000549!4.27e-14!2;CL:0000550!4.27e-14!2;CL:0000552!4.27e-14!2;CL:0001024!8.54e-08!1;CL:0000342!2.66e-07!1;CL:0002565!2.66e-07!1;CL:0000147!4.44e-07!14 | |ontology_enrichment_celltype=CL:0000764!4.27e-14!2;CL:0000765!4.27e-14!2;CL:0000050!4.27e-14!2;CL:0000038!4.27e-14!2;CL:0000558!4.27e-14!2;CL:0000547!4.27e-14!2;CL:0000549!4.27e-14!2;CL:0000550!4.27e-14!2;CL:0000552!4.27e-14!2;CL:0001024!8.54e-08!1;CL:0000342!2.66e-07!1;CL:0002565!2.66e-07!1;CL:0000147!4.44e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0000764;9.38e-99;2!CL:0000558;9.38e-99;2!CL:0002188;3.26e-11;5!CL:0002543;1.44e-09;6!CL:1000746;2.18e-08;7!CL:1000612;2.18e-08;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,5.68e-99,2;CL:0000765,5.68e-99,2;CL:0000050,5.68e-99,2;CL:0000038,5.68e-99,2;CL:0000558,5.68e-99,2;CL:0000547,5.68e-99,2;CL:0000549,5.68e-99,2;CL:0000550,5.68e-99,2;CL:0000552,5.68e-99,2;CL:0002188,3.60e-11,5;CL:0002543,1.44e-09,6;CL:1000746,2.35e-08,7;CL:1000612,2.35e-08,7 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0060060!9.10e-08!1;DOID:0060061!9.10e-08!1;DOID:8691!9.10e-08!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002506!2.66e-07!1;UBERON:0001769!2.66e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0000074;2.18e-08;7!UBERON:0001229;2.18e-08;7!UBERON:0001638;8.37e-07;9!UBERON:0003920;8.37e-07;9!UBERON:0004582;8.37e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010532,2.35e-08,7;UBERON:0000074,2.35e-08,7;UBERON:0001229,2.35e-08,7;UBERON:0001230,2.35e-08,7;UBERON:0003220,2.35e-08,7;UBERON:0005749,2.35e-08,7;UBERON:0004199,2.35e-08,7;UBERON:0004209,2.35e-08,7;UBERON:0004198,2.35e-08,7;UBERON:0005103,1.80e-07,8;UBERON:0000083,1.80e-07,8;UBERON:0009201,1.80e-07,8;UBERON:0006553,1.80e-07,8;UBERON:0003074,1.80e-07,8;UBERON:0003060,1.80e-07,8;UBERON:0001638,8.37e-07,9;UBERON:0003920,8.37e-07,9;UBERON:0004582,8.37e-07,9;UBERON:0000080,8.85e-07,9;UBERON:0002120,8.85e-07,9;UBERON:0004875,8.85e-07,9;UBERON:0005721,8.85e-07,9;UBERON:0005754,8.85e-07,9;UBERON:0007297,8.85e-07,9 | |||
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|short_description=p@chr12:23773763..23773766,- | |short_description=p@chr12:23773763..23773766,- | ||
}} | }} |
Latest revision as of 07:37, 24 July 2015
Short description: | p@chr12:23773763..23773766, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:23773763..23773766, - |
Coexpression cluster: | C33_Reticulocytes_liver_Whole_blood_chronic_acute_spleen |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 5.68e-99 | 2 |
erythroblast | 5.68e-99 | 2 |
megakaryocyte-erythroid progenitor cell | 5.68e-99 | 2 |
erythroid progenitor cell | 5.68e-99 | 2 |
reticulocyte | 5.68e-99 | 2 |
proerythroblast | 5.68e-99 | 2 |
basophilic erythroblast | 5.68e-99 | 2 |
polychromatophilic erythroblast | 5.68e-99 | 2 |
orthochromatic erythroblast | 5.68e-99 | 2 |
glomerular endothelial cell | 3.60e-11 | 5 |
vein endothelial cell | 1.44e-09 | 6 |
glomerular cell | 2.35e-08 | 7 |
kidney corpuscule cell | 2.35e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
primitive nephron | 2.35e-08 | 7 |
renal glomerulus | 2.35e-08 | 7 |
renal corpuscle | 2.35e-08 | 7 |
glomerular capsule | 2.35e-08 | 7 |
metanephric mesenchyme | 2.35e-08 | 7 |
glomerular tuft | 2.35e-08 | 7 |
S-shaped body | 2.35e-08 | 7 |
renal vesicle | 2.35e-08 | 7 |
comma-shaped body | 2.35e-08 | 7 |
mesonephric epithelium | 1.80e-07 | 8 |
mesonephric tubule | 1.80e-07 | 8 |
nephric duct | 1.80e-07 | 8 |
renal duct | 1.80e-07 | 8 |
mesonephric duct | 1.80e-07 | 8 |
pronephric duct | 1.80e-07 | 8 |
vein | 8.37e-07 | 9 |
venous blood vessel | 8.37e-07 | 9 |
venous system | 8.37e-07 | 9 |
mesonephros | 8.85e-07 | 9 |
pronephros | 8.85e-07 | 9 |
nephrogenic cord | 8.85e-07 | 9 |
pronephric mesoderm | 8.85e-07 | 9 |
rostral part of nephrogenic cord | 8.85e-07 | 9 |
presumptive pronephric mesoderm | 8.85e-07 | 9 |