FFCP PHASE1:Hg19::chr10:134479878..134479913,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:134479878..134479913,+ | |||
|description=CAGE_peak_at_chr10:134479878..134479913,+ | |description=CAGE_peak_at_chr10:134479878..134479913,+ | ||
|id=chr10:134479878..134479913,+ | |id=chr10:134479878..134479913,+ | ||
|ontology_enrichment_celltype=CL:1000507!1.59e-09!12;CL:1000494!1.59e-09!12;CL:1000497!2.12e-09!18;CL:0002518!2.12e-09!18;CL:0000055!1.68e-08!180;CL:1000449!6.75e-08!16;CL:0000012!3.09e-07!682;CL:0002057!4.45e-07!42;CL:0000222!4.62e-07!119;CL:0000548!4.68e-07!679;CL:0000004!4.68e-07!679;CL:0000255!4.68e-07!679;CL:0000144!6.93e-07!625;CL:0000057!7.28e-07!75;CL:0002681!9.61e-07!13;CL:0002584!9.61e-07!13 | |ontology_enrichment_celltype=CL:1000507!1.59e-09!12;CL:1000494!1.59e-09!12;CL:1000497!2.12e-09!18;CL:0002518!2.12e-09!18;CL:0000055!1.68e-08!180;CL:1000449!6.75e-08!16;CL:0000012!3.09e-07!682;CL:0002057!4.45e-07!42;CL:0000222!4.62e-07!119;CL:0000548!4.68e-07!679;CL:0000004!4.68e-07!679;CL:0000255!4.68e-07!679;CL:0000144!6.93e-07!625;CL:0000057!7.28e-07!75;CL:0002681!9.61e-07!13;CL:0002584!9.61e-07!13 | ||
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|ontology_enrichment_celltype_v019_2=CL:1000507,7.61e-22,10;CL:1000494,7.61e-22,10;CL:1000449,1.65e-18,15;CL:1000497,3.54e-16,17;CL:0002518,3.54e-16,17;CL:0000239,6.86e-15,3;CL:1000615,6.86e-15,3;CL:0002306,6.86e-15,3;CL:0002681,2.31e-13,12;CL:0002584,2.31e-13,12;CL:0000650,5.55e-10,2;CL:1000500,5.55e-10,2;CL:1000618,5.55e-10,2;CL:1001318,5.55e-10,2;CL:0002173,5.55e-10,2;CL:0002582,4.05e-07,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0004211;1.13e-21;10!UBERON:0009773;1.13e-21;10!UBERON:0001231;1.13e-21;10!UBERON:0004810;1.13e-21;10!UBERON:0006555;2.73e-18;15!UBERON:0004819;2.73e-18;15!UBERON:0001285;2.73e-18;15!UBERON:0007684;2.73e-18;15!UBERON:0006853;8.36e-15;3!UBERON:0007685;8.36e-15;3!UBERON:0004134;8.36e-15;3!UBERON:0001225;2.34e-13;12!UBERON:0008987;2.34e-13;12!UBERON:0002113;6.01e-11;24!UBERON:0011143;6.01e-11;24!UBERON:0001851;1.47e-10;15!UBERON:0000353;1.47e-10;15!UBERON:0003567;3.11e-10;2!UBERON:0003838;3.11e-10;2!UBERON:0003586;3.11e-10;2!UBERON:0005169;3.11e-10;2!UBERON:0002321;3.11e-10;2!UBERON:0005215;3.11e-10;2!UBERON:0002303;3.11e-10;2!UBERON:0002319;3.11e-10;2!UBERON:0000489;7.71e-09;29!UBERON:0006554;1.67e-08;30!UBERON:0001008;1.67e-08;30 | |ontology_enrichment_uberon_v019=UBERON:0004211;1.13e-21;10!UBERON:0009773;1.13e-21;10!UBERON:0001231;1.13e-21;10!UBERON:0004810;1.13e-21;10!UBERON:0006555;2.73e-18;15!UBERON:0004819;2.73e-18;15!UBERON:0001285;2.73e-18;15!UBERON:0007684;2.73e-18;15!UBERON:0006853;8.36e-15;3!UBERON:0007685;8.36e-15;3!UBERON:0004134;8.36e-15;3!UBERON:0001225;2.34e-13;12!UBERON:0008987;2.34e-13;12!UBERON:0002113;6.01e-11;24!UBERON:0011143;6.01e-11;24!UBERON:0001851;1.47e-10;15!UBERON:0000353;1.47e-10;15!UBERON:0003567;3.11e-10;2!UBERON:0003838;3.11e-10;2!UBERON:0003586;3.11e-10;2!UBERON:0005169;3.11e-10;2!UBERON:0002321;3.11e-10;2!UBERON:0005215;3.11e-10;2!UBERON:0002303;3.11e-10;2!UBERON:0002319;3.11e-10;2!UBERON:0000489;7.71e-09;29!UBERON:0006554;1.67e-08;30!UBERON:0001008;1.67e-08;30 | ||
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| ||
|short_description=p@chr10:134479878..134479913,+ | |short_description=p@chr10:134479878..134479913,+ | ||
}} | }} |
Latest revision as of 11:48, 23 July 2015
Short description: | p@chr10:134479878..134479913, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:134479878..134479913, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 7.61e-22 | 10 |
nephron tubule epithelial cell | 7.61e-22 | 10 |
epithelial cell of nephron | 1.65e-18 | 15 |
kidney cell | 3.54e-16 | 17 |
kidney epithelial cell | 3.54e-16 | 17 |
brush border epithelial cell | 6.86e-15 | 3 |
kidney cortex tubule cell | 6.86e-15 | 3 |
epithelial cell of proximal tubule | 6.86e-15 | 3 |
kidney cortical cell | 2.31e-13 | 12 |
renal cortical epithelial cell | 2.31e-13 | 12 |
mesangial cell | 5.55e-10 | 2 |
kidney interstitial cell | 5.55e-10 | 2 |
juxtaglomerular complex cell | 5.55e-10 | 2 |
renal interstitial pericyte | 5.55e-10 | 2 |
extraglomerular mesangial cell | 5.55e-10 | 2 |
visceral preadipocyte | 4.05e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
nephron tubule epithelium | 7.61e-22 | 10 |
nephron epithelium | 1.65e-18 | 15 |
renal tubule | 1.65e-18 | 15 |
nephron tubule | 1.65e-18 | 15 |
nephron | 1.65e-18 | 15 |
uriniferous tubule | 1.65e-18 | 15 |
nephrogenic mesenchyme | 1.65e-18 | 15 |
excretory tube | 2.86e-17 | 16 |
kidney epithelium | 2.86e-17 | 16 |
renal cortex tubule | 6.86e-15 | 3 |
region of nephron tubule | 6.86e-15 | 3 |
proximal tubule | 6.86e-15 | 3 |
cortex of kidney | 2.31e-13 | 12 |
renal parenchyma | 2.31e-13 | 12 |
cortex | 1.46e-10 | 15 |
parenchyma | 1.46e-10 | 15 |
kidney | 3.99e-10 | 26 |
kidney mesenchyme | 3.99e-10 | 26 |
upper urinary tract | 3.99e-10 | 26 |
kidney rudiment | 3.99e-10 | 26 |
kidney field | 3.99e-10 | 26 |
abdomen connective tissue | 5.55e-10 | 2 |
abdominal segment connective tissue | 5.55e-10 | 2 |
trunk connective tissue | 5.55e-10 | 2 |
interstitial tissue | 5.55e-10 | 2 |
extraglomerular mesangium | 5.55e-10 | 2 |
kidney interstitium | 5.55e-10 | 2 |
juxtaglomerular apparatus | 5.55e-10 | 2 |
mesangium | 5.55e-10 | 2 |
cavitated compound organ | 2.76e-08 | 31 |