FFCP PHASE1:Hg19::chr5:160973677..160973713,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2561 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4082 | |||
|TSSclassifier=strong | |||
|UniProt=B7Z279 | |||
|association_with_transcript=0bp_to_ENST00000517547_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_2_at_GABRB2_5end | |||
|id=chr5:160973677..160973713,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;9.30e-15;82!UBERON:0006215;1.24e-11;3!UBERON:0010122;1.02e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.32e-59!57;UBERON:0005068!2.32e-59!57;UBERON:0006241!2.32e-59!57;UBERON:0007135!2.32e-59!57;UBERON:0001017!1.34e-55!82;UBERON:0005743!1.86e-54!86;UBERON:0002616!2.51e-54!59;UBERON:0007023!8.36e-52!115;UBERON:0000073!1.14e-51!94;UBERON:0001016!1.14e-51!94;UBERON:0002780!5.09e-51!41;UBERON:0001890!5.09e-51!41;UBERON:0006240!5.09e-51!41;UBERON:0000955!8.45e-51!69;UBERON:0006238!8.45e-51!69;UBERON:0003080!1.50e-49!42;UBERON:0001869!1.67e-49!32;UBERON:0001893!2.19e-49!34;UBERON:0002020!3.90e-49!34;UBERON:0003528!3.90e-49!34;UBERON:0002791!1.74e-47!33;UBERON:0002346!3.64e-43!90;UBERON:0003075!3.01e-40!86;UBERON:0007284!3.01e-40!86;UBERON:0002619!1.29e-39!22;UBERON:0000956!3.68e-37!25;UBERON:0000203!3.68e-37!25;UBERON:0001950!4.28e-36!20;UBERON:0003056!1.16e-32!61;UBERON:0000033!4.40e-26!123;UBERON:0000924!1.13e-25!173;UBERON:0006601!1.13e-25!173;UBERON:0000153!2.68e-25!129;UBERON:0007811!2.68e-25!129;UBERON:0004121!1.73e-23!169;UBERON:0002420!1.71e-13!9;UBERON:0007245!1.71e-13!9;UBERON:0010009!1.71e-13!9;UBERON:0010011!1.71e-13!9;UBERON:0000454!1.71e-13!9;UBERON:0004732!2.15e-13!13;UBERON:0000025!2.81e-13!194;UBERON:0002308!3.40e-13!9;UBERON:0000125!3.40e-13!9;UBERON:0000200!6.06e-13!6;UBERON:0001871!2.75e-12!7;UBERON:0004733!6.05e-12!12;UBERON:0002028!6.05e-12!12;UBERON:0007277!6.05e-12!12;UBERON:0003076!4.06e-11!15;UBERON:0003057!4.06e-11!15;UBERON:0001872!9.13e-11!5;UBERON:0002021!1.20e-10!5;UBERON:0000349!1.66e-10!5;UBERON:0009663!4.79e-10!7;UBERON:0004111!4.31e-09!241;UBERON:0000064!8.33e-09!219;UBERON:0000369!1.14e-08!4;UBERON:0002435!1.14e-08!4;UBERON:0000204!1.14e-08!4;UBERON:0010082!1.14e-08!4;UBERON:0002298!4.98e-08!8;UBERON:0002680!8.97e-08!9;UBERON:0001895!8.97e-08!9;UBERON:0010092!8.97e-08!9;UBERON:0000477!2.17e-07!286;UBERON:0000475!2.57e-07!365;UBERON:0002771!3.35e-07!3;UBERON:0005383!8.23e-07!3;UBERON:0005382!8.23e-07!3;UBERON:0000483!9.61e-07!309 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;2.78e-72;32!UBERON:0001893;2.75e-70;34!UBERON:0003528;2.08e-69;34!UBERON:0002020;2.08e-69;34!UBERON:0002619;1.98e-68;22!UBERON:0002791;1.46e-67;32!UBERON:0001950;2.95e-62;20!UBERON:0000956;8.05e-60;25!UBERON:0000203;8.05e-60;25!UBERON:0002780;9.60e-58;41!UBERON:0001890;9.60e-58;41!UBERON:0000073;3.00e-53;53!UBERON:0002616;3.00e-53;53!UBERON:0000955;6.33e-35;68!UBERON:0001017;1.24e-32;75!UBERON:0001016;1.20e-28;83!UBERON:0002420;1.37e-22;9!UBERON:0007245;1.37e-22;9!UBERON:0010009;1.37e-22;9!UBERON:0010011;1.37e-22;9!UBERON:0000454;1.37e-22;9!UBERON:0000125;5.28e-22;9!UBERON:0002308;5.28e-22;9!UBERON:0000200;2.36e-21;6!UBERON:0004732;8.42e-19;13!UBERON:0001872;1.47e-17;5!UBERON:0001871;1.98e-17;6!UBERON:0002021;2.17e-17;5!UBERON:0000349;4.03e-17;5!UBERON:0009663;1.44e-16;7!UBERON:0004733;2.21e-16;12!UBERON:0002028;2.21e-16;12!UBERON:0007023;7.72e-15;114!UBERON:0000369;6.42e-14;4!UBERON:0002435;6.42e-14;4!UBERON:0000204;6.42e-14;4!UBERON:0002680;4.49e-13;9!UBERON:0001895;4.49e-13;9!UBERON:0002298;8.34e-13;6!UBERON:0001870;1.04e-11;3!UBERON:0011216;4.34e-11;132!UBERON:0005383;1.07e-10;3!UBERON:0005382;1.07e-10;3!UBERON:0000988;4.36e-10;3!UBERON:0002702;2.74e-08;2!UBERON:0002771;3.68e-08;2!UBERON:0001876;7.31e-08;2!UBERON:0010314;7.76e-08;132!UBERON:0001954;1.01e-07;2!UBERON:0003022;1.01e-07;2!UBERON:0002421;1.01e-07;2!UBERON:0002600;1.01e-07;2!UBERON:0001873;1.02e-07;2!UBERON:0002360;1.74e-07;2!UBERON:0000094;1.74e-07;2!UBERON:0010743;1.74e-07;2!UBERON:0001897;2.27e-07;2!UBERON:0010225;2.27e-07;2!UBERON:0001875;3.14e-07;2!UBERON:0006514;3.14e-07;2!UBERON:0002148;3.46e-07;2!UBERON:0006331;3.46e-07;2!UBERON:0009662;3.46e-07;2!UBERON:0005162;5.15e-07;2!UBERON:0000122;5.15e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,8.54e-97,53;UBERON:0002616,8.54e-97,53;UBERON:0001049,3.77e-91,56;UBERON:0005068,3.77e-91,56;UBERON:0006241,3.77e-91,56;UBERON:0007135,3.77e-91,56;UBERON:0001017,1.92e-83,81;UBERON:0001893,1.53e-81,34;UBERON:0001869,2.73e-81,32;UBERON:0003528,4.10e-81,34;UBERON:0002020,4.10e-81,34;UBERON:0002780,4.25e-81,41;UBERON:0001890,4.25e-81,41;UBERON:0003080,4.25e-81,41;UBERON:0006240,4.25e-81,41;UBERON:0000955,1.97e-80,68;UBERON:0006238,1.97e-80,68;UBERON:0001016,1.89e-77,89;UBERON:0002791,2.29e-75,32;UBERON:0002619,2.06e-68,22;UBERON:0003075,2.15e-62,82;UBERON:0007284,2.15e-62,82;UBERON:0001950,3.06e-62,20;UBERON:0002346,5.33e-62,86;UBERON:0000956,8.33e-60,25;UBERON:0000203,8.33e-60,25;UBERON:0003056,2.36e-55,61;UBERON:0007023,2.42e-47,114;UBERON:0010371,4.25e-47,104;UBERON:0010314,6.18e-39,132;UBERON:0004121,3.43e-37,171;UBERON:0000924,3.43e-37,171;UBERON:0006601,3.43e-37,171;UBERON:0011216,5.94e-33,223;UBERON:0002420,1.17e-22,9;UBERON:0007245,1.17e-22,9;UBERON:0010009,1.17e-22,9;UBERON:0010011,1.17e-22,9;UBERON:0000454,1.17e-22,9;UBERON:0000125,3.92e-22,9;UBERON:0002308,3.92e-22,9;UBERON:0000025,4.26e-22,192;UBERON:0000200,2.32e-21,6;UBERON:0004732,7.08e-19,13;UBERON:0001872,1.45e-17,5;UBERON:0001871,1.96e-17,6;UBERON:0002021,2.32e-17,5;UBERON:0000349,4.10e-17,5;UBERON:0009663,1.22e-16,7;UBERON:0004733,1.89e-16,12;UBERON:0002028,1.89e-16,12;UBERON:0007277,1.89e-16,12;UBERON:0004111,1.32e-15,240;UBERON:0000369,6.32e-14,4;UBERON:0002435,6.32e-14,4;UBERON:0000204,6.32e-14,4;UBERON:0010082,6.32e-14,4;UBERON:0002680,4.08e-13,9;UBERON:0001895,4.08e-13,9;UBERON:0010092,4.08e-13,9;UBERON:0002298,6.87e-13,6;UBERON:0003076,6.99e-13,15;UBERON:0003057,6.99e-13,15;UBERON:0001870,1.04e-11,3;UBERON:0000483,8.70e-11,306;UBERON:0005383,1.06e-10,3;UBERON:0005382,1.06e-10,3;UBERON:0000119,1.39e-10,309;UBERON:0000988,3.78e-10,3;UBERON:0002702,2.74e-08,2;UBERON:0002771,3.62e-08,2;UBERON:0001876,7.44e-08,2;UBERON:0001873,1.01e-07,2;UBERON:0001954,1.01e-07,2;UBERON:0003022,1.01e-07,2;UBERON:0002421,1.01e-07,2;UBERON:0002600,1.01e-07,2;UBERON:0010122,1.01e-07,2;UBERON:0002360,2.31e-07,2;UBERON:0000094,2.31e-07,2;UBERON:0010743,2.31e-07,2;UBERON:0001897,2.38e-07,2;UBERON:0010225,2.38e-07,2;UBERON:0001875,2.63e-07,2;UBERON:0006514,2.63e-07,2;UBERON:0002148,2.99e-07,2;UBERON:0006331,2.99e-07,2;UBERON:0009662,2.99e-07,2;UBERON:0005162,3.87e-07,2;UBERON:0000122,3.87e-07,2;UBERON:0002050,7.91e-07,564 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0.154934401160603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.33996642519167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176096868026452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.537182889719687,0,0,0,0,0.508189248444927,1.30139853857622,1.54657762555539,1.84267891867784,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164254312027618,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0.178064071293475,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0.307240764308458,0.447352215784832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.8771006030923,7.45547906975718,0,0,0.211125408127993,0,0,0,0,0.369254416383208,0,0,0,0,0,0,0,13.5706584453331,37.0144711665787,0,0,0,0,0,0,0,0,0,0,7.97167247232455,9.52711865140723,24.4130778107333,50.9770388282946,24.2349047541909,18.2089879637797,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.794682894901893,0,0,0,0,0,0,0,0,0.123563938946503,0.104421949505455,1.95463285643963,0.802577647298789,12.8845445148937,0,0,0,0,0,5.50930970934882,1.01098527405581,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,1.58186518546373,0,0,42.4815440863946,0,0,0,0,0,0,0.686379991447858,0,0,0,0,0,0,0,4.20294202096853,1.64286454670392,0,0,0,0,0,0,0,0,0,0.201550417460179,0,0,0,0,0,0,0,8.74752658790234,8.03600096058296,0,0,0,0,0,30.6177765556444,0,0.0788057072991982,0.0524545881349981,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68067843270016,3.04134984008187,0,0,0.427149650270779,0,0.414239055347196,0,0,0.365377795142688,0,0,0,0,0,0,40.7591362784814,35.1435642917654,21.6580310122245,0.573409195690071,1.88579387612649,1.24192805882767,0.276697269872462,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.7614617212973,0,0,0,0,0,0,0,0.426766918776564,0,0,0,0,1.24415452006595,0,0,0.157265941855896,0,0,1.06287460050841,0.247871528518004,0,0,0,1.60114149657094,0,0,23.3794379351113,15.5866233958143,10.535834697772,30.5623382718725,5.04143392443436,29.8759330645421,17.9237966651355,1.42769420259154,0,0,0,0,0,0,3.1826595538604,0,0,0,0,0,0,29.1086989705281,19.5269524653462,19.6352456676125,29.4883517401667,5.4697480901822,0,0.496211178389294,0.175871244359621,0,0,0,0,0.227662191351298,0,0,0,4.14615371158673,30.7158852538505,0,0,0,6.59885477647208,0,0,0,0,0.714765441766563,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,1.35535298446752,0,0,0,0,0,0.490296643507811,0,0,0.297046400327086,0,0,1.31577485171795,0,0.0999411559249289,0,0,0,0,0,0,0,22.8451407041473,5.67255897442491,1.0580536810308,0,0,0,0,0,1.0135880080915,0,0,0,0,0,0.267964130156178,4.1458471972939,2.58582489654738,0,0,0.129177819672012,0,0,0,0,0.217716747896961,0,0,0.143444410785353,0,0,0,0,0,0,0.122241444182866,2.84827324821017,0,0,0 | |||
|short_description=p2@GABRB2 | |||
}} |
Revision as of 08:48, 22 January 2014
Short description: | p2@GABRB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GABRB2_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000517547_5end |
EntrezGene: | GABRB2 |
HGNC: | 4082 |
UniProt: | B7Z279 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data