FFCP PHASE1:Hg19::chr3:193272833..193272854,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84239 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25422 | |||
|TSSclassifier=strong | |||
|UniProt=Q4VNC1 | |||
|association_with_transcript=56bp_to_ENST00000342695_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_4_at_ATP13A4_5end | |||
|id=chr3:193272833..193272854,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.99e-21;82!UBERON:0006241;1.33e-11;3!UBERON:0003057;1.33e-11;3!UBERON:0006215;2.10e-11;3!UBERON:0010122;2.17e-08;2!UBERON:0002532;9.93e-07;206!UBERON:0010316;9.93e-07;206 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.78e-109!57;UBERON:0005068!2.78e-109!57;UBERON:0006241!2.78e-109!57;UBERON:0007135!2.78e-109!57;UBERON:0001017!2.79e-95!82;UBERON:0005743!1.20e-93!86;UBERON:0002616!7.93e-92!59;UBERON:0000073!1.08e-86!94;UBERON:0001016!1.08e-86!94;UBERON:0002780!5.93e-86!41;UBERON:0001890!5.93e-86!41;UBERON:0006240!5.93e-86!41;UBERON:0003080!1.05e-83!42;UBERON:0000955!2.80e-83!69;UBERON:0006238!2.80e-83!69;UBERON:0003075!7.94e-81!86;UBERON:0007284!7.94e-81!86;UBERON:0001893!3.40e-78!34;UBERON:0002020!4.54e-78!34;UBERON:0003528!4.54e-78!34;UBERON:0002346!1.14e-76!90;UBERON:0002791!2.07e-75!33;UBERON:0001869!9.27e-73!32;UBERON:0007023!7.35e-71!115;UBERON:0003056!7.74e-58!61;UBERON:0002619!9.90e-57!22;UBERON:0000956!6.35e-54!25;UBERON:0000203!6.35e-54!25;UBERON:0001950!3.76e-51!20;UBERON:0000033!5.00e-50!123;UBERON:0000153!3.48e-49!129;UBERON:0007811!3.48e-49!129;UBERON:0004121!5.88e-48!169;UBERON:0000924!1.56e-46!173;UBERON:0006601!1.56e-46!173;UBERON:0000025!8.54e-30!194;UBERON:0004111!7.21e-26!241;UBERON:0002420!2.14e-25!9;UBERON:0007245!2.14e-25!9;UBERON:0010009!2.14e-25!9;UBERON:0010011!2.14e-25!9;UBERON:0000454!2.14e-25!9;UBERON:0002308!3.00e-25!9;UBERON:0000125!3.00e-25!9;UBERON:0003076!3.78e-25!15;UBERON:0003057!3.78e-25!15;UBERON:0000477!9.49e-23!286;UBERON:0009663!6.09e-20!7;UBERON:0004733!5.04e-18!12;UBERON:0002028!5.04e-18!12;UBERON:0007277!5.04e-18!12;UBERON:0000483!5.08e-18!309;UBERON:0000119!1.04e-17!312;UBERON:0000200!1.54e-17!6;UBERON:0001871!2.46e-17!7;UBERON:0002298!3.07e-17!8;UBERON:0004732!1.71e-16!13;UBERON:0000064!9.04e-16!219;UBERON:0000349!1.63e-15!5;UBERON:0000475!9.79e-15!365;UBERON:0001872!1.00e-14!5;UBERON:0002021!2.99e-14!5;UBERON:0000369!1.43e-12!4;UBERON:0002435!1.43e-12!4;UBERON:0000204!1.43e-12!4;UBERON:0010082!1.43e-12!4;UBERON:0002680!5.37e-11!9;UBERON:0001895!5.37e-11!9;UBERON:0010092!5.37e-11!9;UBERON:0000481!8.16e-10!347;UBERON:0000062!9.21e-10!511;UBERON:0005383!1.04e-09!3;UBERON:0005382!1.04e-09!3;UBERON:0001894!1.18e-09!7;UBERON:0006222!1.18e-09!7;UBERON:0000988!1.38e-09!3;UBERON:0006331!1.64e-09!3;UBERON:0001896!1.69e-09!3;UBERON:0002771!1.69e-09!3;UBERON:0005290!1.69e-09!3;UBERON:0010096!1.69e-09!3;UBERON:0002240!3.33e-09!3;UBERON:0000922!2.44e-08!612;UBERON:0006947!3.01e-08!3;UBERON:0004054!3.01e-08!3;UBERON:0000923!4.71e-08!604;UBERON:0005291!4.71e-08!604;UBERON:0006598!4.71e-08!604;UBERON:0002532!4.71e-08!604;UBERON:0002050!5.16e-08!605;UBERON:0005423!5.16e-08!605;UBERON:0000467!3.02e-07!625;UBERON:0000480!3.29e-07!626;UBERON:0001954!3.57e-07!2;UBERON:0003022!3.57e-07!2;UBERON:0002421!3.57e-07!2;UBERON:0002600!3.57e-07!2;UBERON:0001876!3.79e-07!2;UBERON:0001897!5.08e-07!2;UBERON:0001870!5.23e-07!2;UBERON:0002148!5.38e-07!2;UBERON:0009662!5.38e-07!2;UBERON:0001873!8.80e-07!2;UBERON:0010122!8.80e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.75e-81;34!UBERON:0003528;9.93e-81;34!UBERON:0002020;9.93e-81;34!UBERON:0001869;2.22e-79;32!UBERON:0002791;2.43e-79;32!UBERON:0002619;4.69e-74;22!UBERON:0002780;1.82e-68;41!UBERON:0001890;1.82e-68;41!UBERON:0000073;4.30e-67;53!UBERON:0002616;4.30e-67;53!UBERON:0001950;9.00e-67;20!UBERON:0000956;7.64e-65;25!UBERON:0000203;7.64e-65;25!UBERON:0001017;2.02e-44;75!UBERON:0000955;1.30e-42;68!UBERON:0001016;2.18e-36;83!UBERON:0002420;8.21e-33;9!UBERON:0007245;8.21e-33;9!UBERON:0010009;8.21e-33;9!UBERON:0010011;8.21e-33;9!UBERON:0000454;8.21e-33;9!UBERON:0000125;1.22e-32;9!UBERON:0002308;1.22e-32;9!UBERON:0009663;1.03e-25;7!UBERON:0004733;1.68e-23;12!UBERON:0002028;1.68e-23;12!UBERON:0000200;1.25e-22;6!UBERON:0002298;3.17e-22;6!UBERON:0004732;1.45e-21;13!UBERON:0000349;1.03e-19;5!UBERON:0007023;1.71e-19;114!UBERON:0001871;4.60e-19;6!UBERON:0001872;8.82e-19;5!UBERON:0002021;3.78e-18;5!UBERON:0000369;5.79e-16;4!UBERON:0002435;5.79e-16;4!UBERON:0000204;5.79e-16;4!UBERON:0011216;2.85e-14;132!UBERON:0002680;3.05e-14;9!UBERON:0001895;3.05e-14;9!UBERON:0005383;3.23e-12;3!UBERON:0005382;3.23e-12;3!UBERON:0001870;4.20e-12;3!UBERON:0000988;5.17e-12;3!UBERON:0001896;5.89e-12;3!UBERON:0005290;5.89e-12;3!UBERON:0002240;1.33e-11;3!UBERON:0005174;1.33e-11;3!UBERON:0001137;1.33e-11;3!UBERON:0010314;4.15e-10;132!UBERON:0001954;7.36e-09;2!UBERON:0003022;7.36e-09;2!UBERON:0002421;7.36e-09;2!UBERON:0002600;7.36e-09;2!UBERON:0001876;8.10e-09;2!UBERON:0001897;9.81e-09;2!UBERON:0010225;9.81e-09;2!UBERON:0002771;1.10e-08;2!UBERON:0002148;1.21e-08;2!UBERON:0006331;1.21e-08;2!UBERON:0009662;1.21e-08;2!UBERON:0002702;2.01e-08;2!UBERON:0001873;2.17e-08;2!UBERON:0001875;3.91e-08;2!UBERON:0006514;3.91e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,5.49e-130,56;UBERON:0005068,5.49e-130,56;UBERON:0006241,5.49e-130,56;UBERON:0007135,5.49e-130,56;UBERON:0000073,1.08e-119,53;UBERON:0002616,1.08e-119,53;UBERON:0001017,4.38e-103,81;UBERON:0000955,1.55e-99,68;UBERON:0006238,1.55e-99,68;UBERON:0001893,1.50e-96,34;UBERON:0003528,2.16e-96,34;UBERON:0002020,2.16e-96,34;UBERON:0002780,4.68e-96,41;UBERON:0001890,4.68e-96,41;UBERON:0003080,4.68e-96,41;UBERON:0006240,4.68e-96,41;UBERON:0001016,5.50e-92,89;UBERON:0001869,1.87e-89,32;UBERON:0002791,3.17e-89,32;UBERON:0003075,4.18e-86,82;UBERON:0007284,4.18e-86,82;UBERON:0002346,1.11e-81,86;UBERON:0002619,3.79e-74,22;UBERON:0001950,8.26e-67,20;UBERON:0010371,6.18e-66,104;UBERON:0000956,6.34e-65,25;UBERON:0000203,6.34e-65,25;UBERON:0007023,2.15e-63,114;UBERON:0003056,2.54e-62,61;UBERON:0010314,5.37e-55,132;UBERON:0004121,1.07e-43,171;UBERON:0000924,1.07e-43,171;UBERON:0006601,1.07e-43,171;UBERON:0011216,2.87e-34,223;UBERON:0003076,7.62e-33,15;UBERON:0003057,7.62e-33,15;UBERON:0000025,7.80e-33,192;UBERON:0002420,8.23e-33,9;UBERON:0007245,8.23e-33,9;UBERON:0010009,8.23e-33,9;UBERON:0010011,8.23e-33,9;UBERON:0000454,8.23e-33,9;UBERON:0000125,1.29e-32,9;UBERON:0002308,1.29e-32,9;UBERON:0009663,1.20e-25,7;UBERON:0004111,1.47e-25,240;UBERON:0004733,1.82e-23,12;UBERON:0002028,1.82e-23,12;UBERON:0007277,1.82e-23,12;UBERON:0000200,1.71e-22,6;UBERON:0002298,2.78e-22,6;UBERON:0004732,1.57e-21,13;UBERON:0000349,7.76e-20,5;UBERON:0001871,4.06e-19,6;UBERON:0001872,8.35e-19,5;UBERON:0002021,3.51e-18,5;UBERON:0000483,8.53e-18,306;UBERON:0000119,1.60e-17,309;UBERON:0000369,5.58e-16,4;UBERON:0002435,5.58e-16,4;UBERON:0000204,5.58e-16,4;UBERON:0010082,5.58e-16,4;UBERON:0002680,3.28e-14,9;UBERON:0001895,3.28e-14,9;UBERON:0010092,3.28e-14,9;UBERON:0005383,3.11e-12,3;UBERON:0005382,3.11e-12,3;UBERON:0000988,4.54e-12,3;UBERON:0001870,5.27e-12,3;UBERON:0001896,5.89e-12,3;UBERON:0005290,5.89e-12,3;UBERON:0010096,5.89e-12,3;UBERON:0002240,1.43e-11,3;UBERON:0005174,1.43e-11,3;UBERON:0001137,1.43e-11,3;UBERON:0001954,6.43e-09,2;UBERON:0003022,6.43e-09,2;UBERON:0002421,6.43e-09,2;UBERON:0002600,6.43e-09,2;UBERON:0001876,6.94e-09,2;UBERON:0001897,1.02e-08,2;UBERON:0010225,1.02e-08,2;UBERON:0002148,1.10e-08,2;UBERON:0006331,1.10e-08,2;UBERON:0009662,1.10e-08,2;UBERON:0002771,1.19e-08,2;UBERON:0000923,1.75e-08,560;UBERON:0010316,1.75e-08,560;UBERON:0005291,1.75e-08,560;UBERON:0006598,1.75e-08,560;UBERON:0010317,1.75e-08,560;UBERON:0002532,1.75e-08,560;UBERON:0001873,2.09e-08,2;UBERON:0010122,2.09e-08,2;UBERON:0002050,2.41e-08,564;UBERON:0002702,2.42e-08,2;UBERON:0001875,3.91e-08,2;UBERON:0006514,3.91e-08,2;UBERON:0005423,9.02e-08,581;UBERON:0000922,2.04e-07,592 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572471974262113,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83370705696798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76228387266739,1.30139853857622,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.97073823883149,9.00284265027282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.6319929531426,3.8034920246359,0,0,0,0,0,0,0,0,0,0,2.65722415744152,6.39161124714662,3.05163472634166,4.31259113731776,2.06883333267483,3.07139556015562,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.60531103210635,0,2.57690890297873,0,0,0,0.394584402849391,0,1.22429104652196,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,7.47067392279369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.00210144354895,3.9702559878678,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,4.77137813885582,11.0324758950376,0,0,0,0,0,9.78067862194197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.33486486171598,4.76037366273684,0,0,0.106787412567695,1.10043013569766,0.414239055347196,0,0,0,0,0,0,0,0,0,4.43034089983493,5.00307686098049,4.13130071331449,3.44045517414043,4.43716206147409,7.57576115884878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.25382057376577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,9.12054996369725,2.8339315265117,5.10828348982884,4.71767637753736,1.00828678488687,5.53258019713743,6.29755017964219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.2809953695107,3.90539049306924,5.37385670903079,8.3708869455957,1.09394961803644,0,0,0,0,0,0.336283722218824,0,0.227662191351298,0,0,0,4.48600237647089,7.62964173329049,0,0,0,12.0979004235321,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,1.27016115057279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.06710481613803,2.67341760294377,2.5359343655004,0,0,0,0,0,0,0,0,0,4.01350832824064,0,6.52718305832781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.1458471972939,7.75747468964214,0,0.714193294391221,0,0,0,1.14564884900697,0.606351566874658,0.217716747896961,0.342233301085281,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@ATP13A4 | |||
}} |
Revision as of 23:22, 21 January 2014
Short description: | p4@ATP13A4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ATP13A4_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 56bp_to_ENST00000342695_5end |
EntrezGene: | ATP13A4 |
HGNC: | 25422 |
UniProt: | Q4VNC1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data