FFCP PHASE1:Hg19::chr3:46068969..46068986,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2829 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1625 | |||
|TSSclassifier=strong | |||
|UniProt=Q689E2,P46094,Q502V0 | |||
|association_with_transcript=0bp_to_ENST00000395946,ENST00000542109,NM_001024644,NM_005283,uc003cpe.2,uc003cpf.2_5end | |||
|description=CAGE_peak_2_at_XCR1_5end | |||
|id=chr3:46068969..46068986,- | |||
|ontology_enrichment_celltype=CL:0002541!3.51e-10!3 | |||
|ontology_enrichment_celltype_v019=CL:0002541;8.83e-35;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,7.88e-35,3 | |||
|ontology_enrichment_development_v019=UBERON:0004872;2.56e-25;7!UBERON:0003124;3.44e-12;1!UBERON:0008814;6.99e-07;2!UBERON:0010056;6.99e-07;2!UBERON:0006965;6.99e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.05e-21!115;UBERON:0000476!3.51e-10!3;UBERON:0000920!3.51e-10!3;UBERON:0001042!1.78e-07!10;UBERON:0009145!1.78e-07!10;UBERON:0003124!2.70e-07!7;UBERON:0003408!2.80e-07!10;UBERON:0004177!3.02e-07!7;UBERON:0004921!4.90e-07!129;UBERON:0004185!4.90e-07!129;UBERON:0001007!8.89e-07!155;UBERON:0001555!8.89e-07!155;UBERON:0007026!8.89e-07!155;UBERON:0006562!9.46e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0004177;6.43e-36;5!UBERON:0005057;6.43e-36;5!UBERON:0003124;8.83e-35;3!UBERON:0000920;8.83e-35;3!UBERON:0002370;1.01e-23;2!UBERON:0005058;1.01e-23;2!UBERON:0009113;1.01e-23;2!UBERON:0001723;7.83e-16;3!UBERON:0001033;7.83e-16;3!UBERON:0002106;1.27e-15;3!UBERON:0002372;3.44e-12;1!UBERON:0001961;3.44e-12;1!UBERON:0001744;3.44e-12;1!UBERON:0001042;3.44e-12;1!UBERON:0001735;3.44e-12;1!UBERON:0005631;7.08e-11;10!UBERON:0000158;7.08e-11;10!UBERON:0000077;3.20e-10;27!UBERON:0002405;3.20e-10;27!UBERON:0002108;1.26e-09;4!UBERON:0000478;9.56e-08;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,7.88e-35,3;UBERON:0001042,9.32e-28,10;UBERON:0009145,9.32e-28,10;UBERON:0003124,4.89e-26,7;UBERON:0004177,7.66e-26,7;UBERON:0005057,7.66e-26,7;UBERON:0006562,3.07e-25,11;UBERON:0001723,7.27e-16,3;UBERON:0001033,7.27e-16,3;UBERON:0010056,7.27e-16,3;UBERON:0002106,9.80e-16,3;UBERON:0004854,9.80e-16,3;UBERON:0009034,9.80e-16,3;UBERON:0002095,9.80e-16,3;UBERON:0004782,9.80e-16,3;UBERON:0003281,9.80e-16,3;UBERON:0009664,9.80e-16,3;UBERON:0002296,9.80e-16,3;UBERON:0005602,9.80e-16,3;UBERON:0001179,9.80e-16,3;UBERON:0006293,9.80e-16,3;UBERON:0001557,1.30e-14,19;UBERON:0005631,3.62e-13,14;UBERON:0000158,3.62e-13,14;UBERON:0002370,2.47e-12,4;UBERON:0005058,2.47e-12,4;UBERON:0009113,2.47e-12,4;UBERON:0003295,2.47e-12,4;UBERON:0005562,2.47e-12,4;UBERON:0002372,4.31e-12,1;UBERON:0001961,4.31e-12,1;UBERON:0001744,4.31e-12,1;UBERON:0001735,4.31e-12,1;UBERON:0003408,1.16e-10,10;UBERON:0008814,2.93e-10,18;UBERON:0002108,1.26e-09,4;UBERON:0000077,1.55e-09,29;UBERON:0003351,1.61e-08,6;UBERON:0000166,3.17e-08,22;UBERON:0004921,6.22e-08,118;UBERON:0000478,9.23e-08,24;UBERON:0004923,1.25e-07,66;UBERON:0001041,2.93e-07,87;UBERON:0005409,5.69e-07,25;UBERON:0004119,9.64e-07,160;UBERON:0000925,9.64e-07,160;UBERON:0006595,9.64e-07,160 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0.393364276848904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0.569647187174163,0.476463550915578,0.822724546172388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0.111443384277478,0,0,0.296964680832639,0,0,0,0,0,0,0.19924798825107,0.552567831062295,0,0,0,0,0.179736702294654,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,2.3056390438806,0.0897576444097721,0.54323685961004,3.82801391678303,6.50342913153222,5.86338253620498,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0.995261931078505,0.619202951523374,0.611030144933625,0,0,0,0,0,0,0,0.19566461893209,0,0,2.41981432097328,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.872901148395775,0,0.225980740780532,0,0,0,0,0,0.85381197895741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0.169346664131569,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.209818352539992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0.414239055347196,0.496166021811951,0.395223263795889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,1.77404740325278,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.285906176706625,0,0,0,0,0,0,1.38251932362818,0.860454717640555,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,0.971421986118279,0,0,0,0,0,0,0.463044948647668,1.96703604453562,0,0,0,0,0,0,0,1.87967835959707,2.44939974299593,0,0,0,0,0,0,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.213233981900981,0,5.74841297540454,3.66240814345562,0,0.0636471582781649,0.404234377916439,2.8303177226605,2.05339980651169,1.14498490124799,0.143444410785353,0,0,0,0,0,0,0,0,0,2.01273793591026,0 | |||
|short_description=p2@XCR1 | |||
}} |
Revision as of 18:35, 21 January 2014
Short description: | p2@XCR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_XCR1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000395946, ENST00000542109, NM_001024644, NM_005283, uc003cpe.2, uc003cpf.2_5end |
EntrezGene: | XCR1 |
HGNC: | 1625 |
UniProt: | Q689E2P46094Q502V0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 7.88e-35 | 3 |