FFCP PHASE1:Hg19::chr3:42190714..42190787,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22906 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29947 | |||
|TSSclassifier=strong | |||
|UniProt=E9PDS2 | |||
|association_with_transcript=0bp_to_ENST00000449246,uc003ckz.3,uc011azj.1_5end | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_3_at_TRAK1_5end | |||
|id=chr3:42190714..42190787,+ | |||
|ontology_enrichment_celltype=CL:0000047!4.89e-08!8 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,5.04e-09,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.51e-24;82!UBERON:0006241;4.66e-09;3!UBERON:0003057;4.66e-09;3!UBERON:0006215;1.94e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.51e-76!82;UBERON:0000073!2.46e-75!94;UBERON:0001016!2.46e-75!94;UBERON:0005743!2.33e-74!86;UBERON:0001049!5.92e-73!57;UBERON:0005068!5.92e-73!57;UBERON:0006241!5.92e-73!57;UBERON:0007135!5.92e-73!57;UBERON:0002616!1.93e-63!59;UBERON:0000955!2.99e-61!69;UBERON:0006238!2.99e-61!69;UBERON:0002780!5.97e-57!41;UBERON:0001890!5.97e-57!41;UBERON:0006240!5.97e-57!41;UBERON:0003080!2.59e-55!42;UBERON:0003075!1.03e-52!86;UBERON:0007284!1.03e-52!86;UBERON:0002346!1.79e-51!90;UBERON:0002020!4.74e-46!34;UBERON:0003528!4.74e-46!34;UBERON:0001893!5.56e-46!34;UBERON:0002791!2.47e-44!33;UBERON:0007023!5.87e-43!115;UBERON:0001869!8.06e-43!32;UBERON:0003056!3.36e-38!61;UBERON:0002619!1.85e-36!22;UBERON:0004121!2.57e-34!169;UBERON:0000924!3.23e-34!173;UBERON:0006601!3.23e-34!173;UBERON:0001950!4.07e-33!20;UBERON:0000956!2.28e-31!25;UBERON:0000203!2.28e-31!25;UBERON:0000033!4.24e-30!123;UBERON:0000153!6.24e-28!129;UBERON:0007811!6.24e-28!129;UBERON:0003076!6.53e-18!15;UBERON:0003057!6.53e-18!15;UBERON:0000025!7.33e-17!194;UBERON:0002308!3.52e-16!9;UBERON:0000125!3.52e-16!9;UBERON:0002420!7.53e-16!9;UBERON:0007245!7.53e-16!9;UBERON:0010009!7.53e-16!9;UBERON:0010011!7.53e-16!9;UBERON:0000454!7.53e-16!9;UBERON:0004732!4.64e-15!13;UBERON:0004733!2.37e-13!12;UBERON:0002028!2.37e-13!12;UBERON:0007277!2.37e-13!12;UBERON:0009663!7.11e-13!7;UBERON:0004111!3.31e-12!241;UBERON:0001894!3.56e-12!7;UBERON:0006222!3.56e-12!7;UBERON:0000200!2.32e-11!6;UBERON:0001871!3.65e-11!7;UBERON:0002298!6.72e-11!8;UBERON:0000483!2.18e-10!309;UBERON:0002021!2.36e-10!5;UBERON:0001872!3.35e-10!5;UBERON:0000119!4.05e-10!312;UBERON:0000349!1.26e-09!5;UBERON:0000477!2.58e-09!286;UBERON:0002680!4.33e-09!9;UBERON:0001895!4.33e-09!9;UBERON:0010092!4.33e-09!9;UBERON:0000922!1.71e-08!612;UBERON:0000064!2.04e-08!219;UBERON:0000369!3.74e-08!4;UBERON:0002435!3.74e-08!4;UBERON:0000204!3.74e-08!4;UBERON:0010082!3.74e-08!4;UBERON:0000923!5.28e-08!604;UBERON:0005291!5.28e-08!604;UBERON:0006598!5.28e-08!604;UBERON:0002532!5.28e-08!604;UBERON:0002050!6.01e-08!605;UBERON:0005423!6.01e-08!605;UBERON:0000481!8.11e-08!347;UBERON:0000062!9.86e-08!511;UBERON:0003296!2.12e-07!4;UBERON:0010133!2.12e-07!4;UBERON:0000467!2.45e-07!625;UBERON:0000480!2.77e-07!626;UBERON:0000988!9.51e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.96e-63;41!UBERON:0001890;1.96e-63;41!UBERON:0001893;5.70e-61;34!UBERON:0003528;1.43e-60;34!UBERON:0002020;1.43e-60;34!UBERON:0001869;8.83e-60;32!UBERON:0002791;1.46e-59;32!UBERON:0000073;1.77e-59;53!UBERON:0002616;1.77e-59;53!UBERON:0002619;2.43e-56;22!UBERON:0001950;4.07e-51;20!UBERON:0000956;4.32e-49;25!UBERON:0000203;4.32e-49;25!UBERON:0001017;3.38e-41;75!UBERON:0000955;6.32e-41;68!UBERON:0001016;1.99e-37;83!UBERON:0000125;2.18e-24;9!UBERON:0002308;2.18e-24;9!UBERON:0002420;7.15e-24;9!UBERON:0007245;7.15e-24;9!UBERON:0010009;7.15e-24;9!UBERON:0010011;7.15e-24;9!UBERON:0000454;7.15e-24;9!UBERON:0004732;1.32e-19;13!UBERON:0009663;3.23e-19;7!UBERON:0001894;4.49e-18;7!UBERON:0004733;4.80e-17;12!UBERON:0002028;4.80e-17;12!UBERON:0000200;7.59e-17;6!UBERON:0002298;1.34e-16;6!UBERON:0007023;6.95e-16;114!UBERON:0011216;1.19e-15;132!UBERON:0002021;3.14e-15;5!UBERON:0001872;5.05e-15;5!UBERON:0001871;2.89e-14;6!UBERON:0000349;4.06e-14;5!UBERON:0000369;7.08e-12;4!UBERON:0002435;7.08e-12;4!UBERON:0000204;7.08e-12;4!UBERON:0002784;2.37e-11;4!UBERON:0002680;1.14e-10;9!UBERON:0001895;1.14e-10;9!UBERON:0003296;1.17e-10;4!UBERON:0010133;1.17e-10;4!UBERON:0000988;1.18e-09;3!UBERON:0001870;3.15e-09;3!UBERON:0005383;3.15e-09;3!UBERON:0005382;3.15e-09;3!UBERON:0002240;4.66e-09;3!UBERON:0005174;4.66e-09;3!UBERON:0001137;4.66e-09;3!UBERON:0010314;6.63e-09;132!UBERON:0001896;1.17e-08;3!UBERON:0005290;1.17e-08;3!UBERON:0005162;4.93e-07;2!UBERON:0000122;4.93e-07;2!UBERON:0002148;7.41e-07;2!UBERON:0006331;7.41e-07;2!UBERON:0009662;7.41e-07;2!UBERON:0001954;8.55e-07;2!UBERON:0003022;8.55e-07;2!UBERON:0002421;8.55e-07;2!UBERON:0002600;8.55e-07;2!UBERON:0001875;8.80e-07;2!UBERON:0006514;8.80e-07;2 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.79839318943367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18157981336281,0,1.10689594688802,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52456774533478,26.0279707715243,23.1986643833309,28.9803139028423,27.431366321086,0,0,0,0,0,0,0,0,0,0,0,0,2.0694614258501,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0.748562161632879,0,0,0,0,0,0,0,15.9063623642608,11.253553312841,0,0,0,0,0.276283915531148,0.251932747854276,0,0,0,0,0,0,0,0,0,23.2639859062852,17.6259386507517,49.9034495002985,0,0,0,0,0,0,0,0,0,22.143534645346,17.2452907234333,13.7323562685375,5.86070077635491,8.57088094965288,8.7754158861589,0,0,0,0,0.23056390438806,0,2.82483166997221,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41353071433941,0,0,0.0884575645033392,0.611030144933625,0,0.123563938946503,0.208843899010911,21.703164819778,0,16.8670400922244,0,0.19566461893209,0,0,0,56.9295336632712,0.505492637027904,0.300646838828985,0,0,0,0,0,0,0.138674673013139,0,0.0979923974143777,0,0.17472666824203,0,0.19351266257817,0,0,0,0,2.48578814858586,0,0,22.6652649522046,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,34.223956456458,11.3631464480354,0,0,0,0.558564802544508,0,0,0,0,0.223171457441873,0.134366944973453,0,0,0,0,0,0,0,27.8330391433256,14.437561047827,0.160753148465019,0,0,0,0,22.3558368501531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.4344787523331,19.17372725269,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,15.9492272394057,22.4528327419612,22.4091765964635,13.7618206965617,8.65246601987448,16.7039323912321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.690860683462397,0,17.2823045189663,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40683808434017,4.52864207866064,0,6.98941684428889,0.169732529954025,0,0,0,0,0,0,0,0,23.2509794849183,34.0071783181404,17.8789922144009,27.0753600797797,70.8321466383028,22.6835788082635,23.5754442622503,34.2646608621971,0,0,0,0,0,0,0,0,0,0,0,0,0.147856086217045,21.3418767394127,24.9944991556431,16.7416305165959,24.7321659756237,61.2611786100406,0,0,0,0,14.999651404592,11.43364655544,4.24875922965642,3.41493287026946,0,0,0,27.5277418556168,23.1520162941229,0.118193840883968,0,0,20.8963734588283,0,3.65263488203798,0,0,0.643288897589907,0.158013611732727,0,0,0,0,0,0,0,0,0,0.423387050190929,0.22910686854405,0,0,0,0,0.121917924982269,0,0,2.3196288626764,0,0,0.397901550322736,0,0,0.109940516745429,0,0,0,0,0,0,26.8942599947475,10.396624011448,15.2156061930024,0,0,0.0644578879735772,0,0,0,0,0.730336388246517,0,10.6071291532074,0,21.6212938807109,83.7793325453525,0.5290268405154,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,25.7042526232222,12.3085265075655,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@TRAK1 | |||
}} |
Revision as of 18:23, 21 January 2014
Short description: | p3@TRAK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TRAK1_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 0bp_to_ENST00000449246, uc003ckz.3, uc011azj.1_5end |
EntrezGene: | TRAK1 |
HGNC: | 29947 |
UniProt: | E9PDS2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 5.04e-09 | 8 |