FFCP PHASE1:Hg19::chr2:242752474..242752522,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=129807 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21328 | |||
|TSSclassifier=weak | |||
|UniProt=C9JRN9,C9IZG9,C9J2V4,C9J295 | |||
|association_with_transcript=0bp_to_ENST00000420288,ENST00000426032,ENST00000435894,ENST00000435934,ENST00000488997,ENST00000494678_5end | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_3_at_NEU4_5end | |||
|id=chr2:242752474..242752522,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.00e-21;82!UBERON:0006241;2.94e-12;3!UBERON:0003057;2.94e-12;3!UBERON:0006215;1.45e-11;3!UBERON:0002532;4.11e-07;206!UBERON:0010316;4.11e-07;206 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.26e-90!57;UBERON:0005068!1.26e-90!57;UBERON:0006241!1.26e-90!57;UBERON:0007135!1.26e-90!57;UBERON:0001017!3.00e-76!82;UBERON:0002616!3.25e-75!59;UBERON:0005743!6.06e-75!86;UBERON:0000073!1.05e-69!94;UBERON:0001016!1.05e-69!94;UBERON:0002780!1.10e-68!41;UBERON:0001890!1.10e-68!41;UBERON:0006240!1.10e-68!41;UBERON:0000955!2.41e-68!69;UBERON:0006238!2.41e-68!69;UBERON:0003080!7.64e-67!42;UBERON:0002346!4.59e-63!90;UBERON:0003075!2.82e-61!86;UBERON:0007284!2.82e-61!86;UBERON:0001893!9.62e-61!34;UBERON:0002020!1.26e-60!34;UBERON:0003528!1.26e-60!34;UBERON:0002791!2.58e-58!33;UBERON:0007023!1.96e-56!115;UBERON:0001869!8.43e-56!32;UBERON:0002619!5.16e-46!22;UBERON:0003056!1.02e-45!61;UBERON:0001950!3.57e-41!20;UBERON:0000956!5.54e-40!25;UBERON:0000203!5.54e-40!25;UBERON:0000153!9.92e-40!129;UBERON:0007811!9.92e-40!129;UBERON:0000033!1.35e-38!123;UBERON:0000924!1.09e-37!173;UBERON:0006601!1.09e-37!173;UBERON:0004121!6.99e-36!169;UBERON:0003076!1.45e-23!15;UBERON:0003057!1.45e-23!15;UBERON:0002308!2.76e-22!9;UBERON:0000125!2.76e-22!9;UBERON:0002420!6.36e-22!9;UBERON:0007245!6.36e-22!9;UBERON:0010009!6.36e-22!9;UBERON:0010011!6.36e-22!9;UBERON:0000454!6.36e-22!9;UBERON:0004732!3.34e-19!13;UBERON:0000025!7.62e-19!194;UBERON:0009663!2.12e-17!7;UBERON:0004733!9.12e-17!12;UBERON:0002028!9.12e-17!12;UBERON:0007277!9.12e-17!12;UBERON:0002298!4.89e-16!8;UBERON:0000200!6.52e-16!6;UBERON:0004111!1.39e-13!241;UBERON:0000349!2.07e-13!5;UBERON:0002021!2.47e-13!5;UBERON:0000483!2.81e-13!309;UBERON:0001872!4.46e-13!5;UBERON:0000119!5.13e-13!312;UBERON:0001871!1.12e-11!7;UBERON:0000477!1.30e-11!286;UBERON:0000064!9.60e-11!219;UBERON:0000475!1.68e-10!365;UBERON:0000369!1.82e-10!4;UBERON:0002435!1.82e-10!4;UBERON:0000204!1.82e-10!4;UBERON:0010082!1.82e-10!4;UBERON:0002680!2.64e-10!9;UBERON:0001895!2.64e-10!9;UBERON:0010092!2.64e-10!9;UBERON:0001894!2.27e-09!7;UBERON:0006222!2.27e-09!7;UBERON:0000988!4.57e-09!3;UBERON:0002240!6.63e-09!3;UBERON:0006331!6.99e-09!3;UBERON:0001896!7.57e-09!3;UBERON:0005290!7.57e-09!3;UBERON:0010096!7.57e-09!3;UBERON:0002771!9.83e-09!3;UBERON:0005383!4.43e-08!3;UBERON:0005382!4.43e-08!3;UBERON:0000922!2.10e-07!612;UBERON:0000923!3.62e-07!604;UBERON:0005291!3.62e-07!604;UBERON:0006598!3.62e-07!604;UBERON:0002532!3.62e-07!604;UBERON:0002050!3.97e-07!605;UBERON:0005423!3.97e-07!605;UBERON:0005162!5.47e-07!2;UBERON:0000122!5.47e-07!2;UBERON:0000062!5.76e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.22e-60;34!UBERON:0003528;6.88e-59;34!UBERON:0002020;6.88e-59;34!UBERON:0000073;2.57e-58;53!UBERON:0002616;2.57e-58;53!UBERON:0001869;4.29e-57;32!UBERON:0002791;5.82e-57;32!UBERON:0002780;1.89e-55;41!UBERON:0001890;1.89e-55;41!UBERON:0002619;1.12e-54;22!UBERON:0001950;6.50e-48;20!UBERON:0000956;8.29e-48;25!UBERON:0000203;8.29e-48;25!UBERON:0001017;4.44e-38;75!UBERON:0000955;4.45e-38;68!UBERON:0001016;1.02e-29;83!UBERON:0004732;1.18e-27;13!UBERON:0000125;3.76e-25;9!UBERON:0002308;3.76e-25;9!UBERON:0002420;1.50e-24;9!UBERON:0007245;1.50e-24;9!UBERON:0010009;1.50e-24;9!UBERON:0010011;1.50e-24;9!UBERON:0000454;1.50e-24;9!UBERON:0004733;4.24e-24;12!UBERON:0002028;4.24e-24;12!UBERON:0002298;7.23e-23;6!UBERON:0000200;2.34e-22;6!UBERON:0000349;1.93e-18;5!UBERON:0007023;2.53e-18;114!UBERON:0009663;3.02e-18;7!UBERON:0002680;1.27e-14;9!UBERON:0001895;1.27e-14;9!UBERON:0001871;2.03e-13;6!UBERON:0002021;1.17e-12;5!UBERON:0000988;1.97e-12;3!UBERON:0011216;2.23e-12;132!UBERON:0001872;2.88e-12;5!UBERON:0002240;2.94e-12;3!UBERON:0005174;2.94e-12;3!UBERON:0001137;2.94e-12;3!UBERON:0001896;3.50e-12;3!UBERON:0005290;3.50e-12;3!UBERON:0001870;1.00e-11;3!UBERON:0005162;2.05e-09;2!UBERON:0000122;2.05e-09;2!UBERON:0002784;4.07e-09;4!UBERON:0001894;4.44e-09;7!UBERON:0010314;5.60e-09;132!UBERON:0001897;6.84e-09;2!UBERON:0010225;6.84e-09;2!UBERON:0002148;8.31e-09;2!UBERON:0006331;8.31e-09;2!UBERON:0009662;8.31e-09;2!UBERON:0002771;9.33e-09;2!UBERON:0000369;1.17e-08;4!UBERON:0002435;1.17e-08;4!UBERON:0000204;1.17e-08;4!UBERON:0001954;1.32e-08;2!UBERON:0003022;1.32e-08;2!UBERON:0002421;1.32e-08;2!UBERON:0002600;1.32e-08;2!UBERON:0001875;1.96e-08;2!UBERON:0006514;1.96e-08;2!UBERON:0002702;2.80e-08;2!UBERON:0001876;4.14e-08;2 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0.674170453335254,0,0,1.27867425159808,0,0,0,0,0,0.622822248995575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76821751921912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.580024309752732,0,0.15350367472613,0,0,0,0,4.89676196057055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9882952955326,2.95405774462077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.6319929531426,3.89626012279775,0,0,0,0,0,0,0,0.344743373241465,0,0,0.885741385813839,1.92954301800653,1.52581736317083,1.3269511191747,4.43321428430321,3.07139556015562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.33570650018364,0,8.66778449183755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.54540457352921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.20294202096853,1.77976992559591,0,0,0,0,0,0,0,0,0.669514372325618,0,0,0,0,0,0,0,0,4.77137813885582,2.58786471611994,0,0,0,0,0,3.9487211827716,0,0,0,0,0,0,0,0.662091970365432,0,0,0,0,0,0.082092520749339,0,0,0,0,6.72271373080063,2.51241943311111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65820453990096,4.02686674176478,2.253436752717,3.44045517414043,2.3295100822739,5.02980863825206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.594719339945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247871528518004,0,0,0,0,0,0,3.59683660540173,1.41696576325585,4.46974805360024,4.1023272848151,0.504143392443436,5.11763668235212,5.81312324274664,11.4215536207324,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,3.7821047386301,3.12431239445539,1.86018116851066,3.6781169912466,0.546974809018219,0,0,0.175871244359621,0,1.07140367175657,0.336283722218824,0,0,0,0,0,4.21412344456357,4.34100305514804,0,0,0,1.09980912941201,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,4.6392577253528,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,6.0855624805633,1.18818560130834,4.226557275834,0,0,0,0,0,0,0,0,0,2.86679166302903,0,5.16735325450952,0.872701380680755,0,0,0,0,0,0,0,0,0,0,0,0,0,5.80418607621146,3.30985586758065,0.213233981900981,1.42838658878244,0,0,0,0.0636471582781649,0.808468755832877,0,1.02669990325584,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@NEU4 | |||
}} |
Revision as of 09:43, 21 January 2014
Short description: | p3@NEU4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_NEU4_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 0bp_to_ENST00000420288, ENST00000426032, ENST00000435894, ENST00000435934, ENST00000488997, ENST00000494678_5end |
EntrezGene: | NEU4 |
HGNC: | 21328 |
UniProt: | C9JRN9C9IZG9C9J2V4C9J295 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data