FFCP PHASE1:Hg19::chr17:4402141..4402158,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=124976 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26992 | |||
|TSSclassifier=strong | |||
|UniProt=Q8IVW8 | |||
|association_with_transcript=12bp_to_ENST00000329078,NM_001124758,uc002fxx.2_5end | |||
|coexpression_cluster_id=C3643 | |||
|description=CAGE_peak_2_at_SPNS2_5end | |||
|id=chr17:4402141..4402158,+ | |||
|ontology_enrichment_celltype=CL:1000497!1.99e-11!18;CL:0002518!1.99e-11!18;CL:0002139!1.13e-10!24;CL:1000449!3.38e-10!16;CL:0000115!5.96e-10!35;CL:0002078!1.72e-09!44;CL:1000507!3.39e-09!12;CL:1000494!3.39e-09!12;CL:0002681!7.73e-08!13;CL:0002584!7.73e-08!13;CL:0000071!9.33e-07!18;CL:0002546!9.33e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:1000497;1.58e-19;17!CL:0002518;1.58e-19;17!CL:1000449;1.40e-17;15!CL:1000507;1.47e-14;10!CL:1000494;1.47e-14;10!CL:0002681;9.32e-14;12!CL:0002584;9.32e-14;12!CL:0002139;9.49e-12;24!CL:0000115;2.52e-11;36!CL:0002078;2.85e-09;45!CL:0002138;1.68e-08;6!CL:0002543;2.47e-07;6!CL:1000746;3.62e-07;7!CL:1000612;3.62e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:1000497,1.54e-19,17;CL:0002518,1.54e-19,17;CL:1000449,1.44e-17,15;CL:1000507,1.21e-14,10;CL:1000494,1.21e-14,10;CL:0000115,6.38e-14,36;CL:0002078,8.37e-14,45;CL:0002681,1.11e-13,12;CL:0002584,1.11e-13,12;CL:0002139,6.74e-12,24;CL:0005020,1.61e-08,6;CL:0002138,1.61e-08,6;CL:0005022,1.61e-08,6;CL:0000213,1.88e-08,58;CL:0000215,1.88e-08,58;CL:0002543,2.08e-07,6;CL:1000746,4.87e-07,7;CL:1000612,4.87e-07,7 | |||
|ontology_enrichment_development_v019=UBERON:0006601;9.31e-10;82!CL:0005022;1.68e-08;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001893;3.01e-23;34!UBERON:0003528;4.77e-23;34!UBERON:0002020;4.77e-23;34!UBERON:0001869;1.27e-22;32!UBERON:0002791;2.14e-22;32!UBERON:0002619;5.20e-21;22!UBERON:0002780;1.34e-20;41!UBERON:0001890;1.34e-20;41!UBERON:0001950;9.37e-19;20!UBERON:0000073;3.88e-18;53!UBERON:0002616;3.88e-18;53!UBERON:0000956;8.76e-18;25!UBERON:0000203;8.76e-18;25!UBERON:0006555;1.40e-17;15!UBERON:0004819;1.40e-17;15!UBERON:0001285;1.40e-17;15!UBERON:0007684;1.40e-17;15!UBERON:0000489;8.40e-17;29!UBERON:0002113;8.43e-16;24!UBERON:0011143;8.43e-16;24!UBERON:0000353;6.10e-15;15!UBERON:0004211;1.47e-14;10!UBERON:0009773;1.47e-14;10!UBERON:0001231;1.47e-14;10!UBERON:0004810;1.47e-14;10!UBERON:0001225;9.32e-14;12!UBERON:0008987;9.32e-14;12!UBERON:0001017;2.54e-12;75!UBERON:0000955;1.01e-11;68!UBERON:0006554;1.81e-11;30!UBERON:0001008;1.81e-11;30!UBERON:0000125;2.47e-11;9!UBERON:0002308;2.47e-11;9!UBERON:0002420;2.74e-11;9!UBERON:0007245;2.74e-11;9!UBERON:0010009;2.74e-11;9!UBERON:0010011;2.74e-11;9!UBERON:0000454;2.74e-11;9!UBERON:0007023;1.55e-10;114!UBERON:0001851;2.45e-10;15!UBERON:0001016;2.38e-09;83!UBERON:0009663;3.76e-09;7!UBERON:0000200;3.96e-09;6!UBERON:0002298;4.51e-08;6!UBERON:0000349;2.73e-07;5!UBERON:0000074;3.62e-07;7!UBERON:0001229;3.62e-07;7 | |||
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| |||
|short_description=p2@SPNS2 | |||
}} |
Revision as of 13:11, 20 January 2014
Short description: | p2@SPNS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SPNS2_5end |
Coexpression cluster: | C3643_Renal_signet_Hepatic_acute_mesothelioma_Retinal_smallcell |
Association with transcript: | 12bp_to_ENST00000329078, NM_001124758, uc002fxx.2_5end |
EntrezGene: | SPNS2 |
HGNC: | 26992 |
UniProt: | Q8IVW8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney cell | 1.54e-19 | 17 |
kidney epithelial cell | 1.54e-19 | 17 |
epithelial cell of nephron | 1.44e-17 | 15 |
kidney tubule cell | 1.21e-14 | 10 |
nephron tubule epithelial cell | 1.21e-14 | 10 |
endothelial cell | 6.38e-14 | 36 |
meso-epithelial cell | 8.37e-14 | 45 |
kidney cortical cell | 1.11e-13 | 12 |
renal cortical epithelial cell | 1.11e-13 | 12 |
endothelial cell of vascular tree | 6.74e-12 | 24 |
lymphangioblast | 1.61e-08 | 6 |
endothelial cell of lymphatic vessel | 1.61e-08 | 6 |
vascular lymphangioblast | 1.61e-08 | 6 |
lining cell | 1.88e-08 | 58 |
barrier cell | 1.88e-08 | 58 |
vein endothelial cell | 2.08e-07 | 6 |
glomerular cell | 4.87e-07 | 7 |
kidney corpuscule cell | 4.87e-07 | 7 |