FFCP PHASE1:Hg19::chr11:35440898..35440916,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6506 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10940 | |||
|TSSclassifier=strong | |||
|UniProt=P43004 | |||
|association_with_transcript=-102bp_to_ENST00000278379_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_2_at_SLC1A2_5end | |||
|id=chr11:35440898..35440916,- | |||
|ontology_enrichment_celltype=CL:0000047!6.75e-09!8 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,4.58e-08,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;7.44e-24;82!UBERON:0006215;5.65e-09;3!UBERON:0006241;6.86e-09;3!UBERON:0003057;6.86e-09;3!UBERON:0003056;3.38e-08;3!UBERON:0010122;3.92e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!9.01e-76!82;UBERON:0001049!2.22e-74!57;UBERON:0005068!2.22e-74!57;UBERON:0006241!2.22e-74!57;UBERON:0007135!2.22e-74!57;UBERON:0005743!9.59e-74!86;UBERON:0000073!1.46e-73!94;UBERON:0001016!1.46e-73!94;UBERON:0002616!1.69e-62!59;UBERON:0000955!4.01e-60!69;UBERON:0006238!4.01e-60!69;UBERON:0002780!1.01e-59!41;UBERON:0001890!1.01e-59!41;UBERON:0006240!1.01e-59!41;UBERON:0003080!5.48e-58!42;UBERON:0003075!2.24e-53!86;UBERON:0007284!2.24e-53!86;UBERON:0001893!1.41e-52!34;UBERON:0002020!1.61e-52!34;UBERON:0003528!1.61e-52!34;UBERON:0002791!6.93e-51!33;UBERON:0002346!3.74e-50!90;UBERON:0001869!1.22e-49!32;UBERON:0003056!7.42e-42!61;UBERON:0007023!1.16e-39!115;UBERON:0000956!4.64e-38!25;UBERON:0000203!4.64e-38!25;UBERON:0004121!8.55e-35!169;UBERON:0002619!1.79e-34!22;UBERON:0000924!1.76e-33!173;UBERON:0006601!1.76e-33!173;UBERON:0000033!1.47e-32!123;UBERON:0000153!1.88e-31!129;UBERON:0007811!1.88e-31!129;UBERON:0001950!4.43e-31!20;UBERON:0000025!5.02e-17!194;UBERON:0003076!8.37e-17!15;UBERON:0003057!8.37e-17!15;UBERON:0002420!6.43e-16!9;UBERON:0007245!6.43e-16!9;UBERON:0010009!6.43e-16!9;UBERON:0010011!6.43e-16!9;UBERON:0000454!6.43e-16!9;UBERON:0002308!1.18e-15!9;UBERON:0000125!1.18e-15!9;UBERON:0004732!5.82e-14!13;UBERON:0004111!1.10e-13!241;UBERON:0004733!1.04e-12!12;UBERON:0002028!1.04e-12!12;UBERON:0007277!1.04e-12!12;UBERON:0009663!1.24e-12!7;UBERON:0000200!3.31e-11!6;UBERON:0000064!3.46e-11!219;UBERON:0000475!3.86e-11!365;UBERON:0001871!5.66e-11!7;UBERON:0000477!8.21e-11!286;UBERON:0002298!3.79e-10!8;UBERON:0000349!5.62e-10!5;UBERON:0001872!2.33e-09!5;UBERON:0002021!3.05e-09!5;UBERON:0002680!1.40e-08!9;UBERON:0001895!1.40e-08!9;UBERON:0010092!1.40e-08!9;UBERON:0001894!1.49e-08!7;UBERON:0006222!1.49e-08!7;UBERON:0000468!1.87e-08!659;UBERON:0000483!2.12e-08!309;UBERON:0000369!3.29e-08!4;UBERON:0002435!3.29e-08!4;UBERON:0000204!3.29e-08!4;UBERON:0010082!3.29e-08!4;UBERON:0000119!3.73e-08!312;UBERON:0000467!3.33e-07!625;UBERON:0000922!3.46e-07!612;UBERON:0000480!3.80e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.01e-67;34!UBERON:0003528;3.36e-67;34!UBERON:0002020;3.36e-67;34!UBERON:0001869;1.69e-66;32!UBERON:0002791;3.47e-66;32!UBERON:0002780;3.59e-65;41!UBERON:0001890;3.59e-65;41!UBERON:0000073;7.03e-62;53!UBERON:0002616;7.03e-62;53!UBERON:0002619;3.52e-58;22!UBERON:0000956;3.13e-55;25!UBERON:0000203;3.13e-55;25!UBERON:0001950;2.31e-52;20!UBERON:0000955;8.10e-44;68!UBERON:0001017;2.40e-43;75!UBERON:0001016;7.89e-39;83!UBERON:0002420;5.05e-26;9!UBERON:0007245;5.05e-26;9!UBERON:0010009;5.05e-26;9!UBERON:0010011;5.05e-26;9!UBERON:0000454;5.05e-26;9!UBERON:0000125;1.41e-25;9!UBERON:0002308;1.41e-25;9!UBERON:0009663;2.06e-20;7!UBERON:0004732;1.30e-19;13!UBERON:0000200;5.19e-18;6!UBERON:0004733;1.59e-17;12!UBERON:0002028;1.59e-17;12!UBERON:0002298;1.05e-16;6!UBERON:0007023;1.56e-16;114!UBERON:0000349;6.95e-16;5!UBERON:0001871;2.44e-15;6!UBERON:0001872;7.84e-15;5!UBERON:0002021;1.22e-14;5!UBERON:0001894;8.81e-14;7!UBERON:0011216;1.17e-13;132!UBERON:0000369;6.93e-13;4!UBERON:0002435;6.93e-13;4!UBERON:0000204;6.93e-13;4!UBERON:0002784;2.75e-11;4!UBERON:0002680;8.32e-11;9!UBERON:0001895;8.32e-11;9!UBERON:0010314;1.54e-10;132!UBERON:0005383;4.70e-10;3!UBERON:0005382;4.70e-10;3!UBERON:0001870;9.39e-10;3!UBERON:0000988;2.69e-09;3!UBERON:0001896;4.16e-09;3!UBERON:0005290;4.16e-09;3!UBERON:0002240;6.86e-09;3!UBERON:0005174;6.86e-09;3!UBERON:0001137;6.86e-09;3!UBERON:0001954;2.02e-07;2!UBERON:0003022;2.02e-07;2!UBERON:0002421;2.02e-07;2!UBERON:0002600;2.02e-07;2!UBERON:0001876;2.62e-07;2!UBERON:0002771;2.95e-07;2!UBERON:0001873;3.92e-07;2!UBERON:0004121;4.95e-07;165!UBERON:0002702;5.67e-07;2!UBERON:0001875;6.10e-07;2!UBERON:0006514;6.10e-07;2!UBERON:0002148;7.47e-07;2!UBERON:0006331;7.47e-07;2!UBERON:0009662;7.47e-07;2!UBERON:0001897;9.01e-07;2!UBERON:0010225;9.01e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.00e-117,81;UBERON:0001049,4.62e-117,56;UBERON:0005068,4.62e-117,56;UBERON:0006241,4.62e-117,56;UBERON:0007135,4.62e-117,56;UBERON:0001016,1.92e-111,89;UBERON:0000073,2.61e-109,53;UBERON:0002616,2.61e-109,53;UBERON:0000955,2.26e-97,68;UBERON:0006238,2.26e-97,68;UBERON:0002780,1.26e-92,41;UBERON:0001890,1.26e-92,41;UBERON:0003080,1.26e-92,41;UBERON:0006240,1.26e-92,41;UBERON:0003075,4.61e-86,82;UBERON:0007284,4.61e-86,82;UBERON:0002346,1.76e-81,86;UBERON:0001893,7.56e-80,34;UBERON:0003528,9.36e-80,34;UBERON:0002020,9.36e-80,34;UBERON:0001869,7.81e-75,32;UBERON:0002791,2.20e-74,32;UBERON:0003056,3.66e-69,61;UBERON:0010371,3.46e-65,104;UBERON:0002619,3.43e-58,22;UBERON:0000956,3.06e-55,25;UBERON:0000203,3.06e-55,25;UBERON:0007023,9.78e-55,114;UBERON:0004121,6.54e-54,171;UBERON:0000924,6.54e-54,171;UBERON:0006601,6.54e-54,171;UBERON:0010314,5.11e-53,132;UBERON:0001950,2.28e-52,20;UBERON:0011216,1.39e-42,223;UBERON:0000025,6.29e-28,192;UBERON:0002420,4.97e-26,9;UBERON:0007245,4.97e-26,9;UBERON:0010009,4.97e-26,9;UBERON:0010011,4.97e-26,9;UBERON:0000454,4.97e-26,9;UBERON:0000125,1.41e-25,9;UBERON:0002308,1.41e-25,9;UBERON:0003076,2.35e-24,15;UBERON:0003057,2.35e-24,15;UBERON:0009663,2.04e-20,7;UBERON:0004111,9.36e-20,240;UBERON:0004732,1.28e-19,13;UBERON:0000200,5.51e-18,6;UBERON:0004733,1.56e-17,12;UBERON:0002028,1.56e-17,12;UBERON:0007277,1.56e-17,12;UBERON:0002298,1.01e-16,6;UBERON:0000349,6.85e-16,5;UBERON:0001871,2.47e-15,6;UBERON:0000483,4.05e-15,306;UBERON:0000119,7.63e-15,309;UBERON:0001872,7.73e-15,5;UBERON:0002021,1.22e-14,5;UBERON:0001894,8.81e-14,7;UBERON:0006222,8.81e-14,7;UBERON:0000369,6.93e-13,4;UBERON:0002435,6.93e-13,4;UBERON:0000204,6.93e-13,4;UBERON:0010082,6.93e-13,4;UBERON:0002784,2.75e-11,4;UBERON:0002680,8.39e-11,9;UBERON:0001895,8.39e-11,9;UBERON:0010092,8.39e-11,9;UBERON:0005383,4.71e-10,3;UBERON:0005382,4.71e-10,3;UBERON:0001870,9.26e-10,3;UBERON:0000988,2.69e-09,3;UBERON:0001896,3.99e-09,3;UBERON:0005290,3.99e-09,3;UBERON:0010096,3.99e-09,3;UBERON:0002240,7.35e-09,3;UBERON:0005174,7.35e-09,3;UBERON:0001137,7.35e-09,3;UBERON:0000923,1.43e-08,560;UBERON:0010316,1.43e-08,560;UBERON:0005291,1.43e-08,560;UBERON:0006598,1.43e-08,560;UBERON:0010317,1.43e-08,560;UBERON:0002532,1.43e-08,560;UBERON:0002050,2.11e-08,564;UBERON:0000922,7.60e-08,592;UBERON:0005423,1.04e-07,581;UBERON:0001954,1.99e-07,2;UBERON:0003022,1.99e-07,2;UBERON:0002421,1.99e-07,2;UBERON:0002600,1.99e-07,2;UBERON:0001876,2.62e-07,2;UBERON:0002771,3.04e-07,2;UBERON:0001873,3.98e-07,2;UBERON:0010122,3.98e-07,2;UBERON:0002702,5.67e-07,2;UBERON:0001875,6.01e-07,2;UBERON:0006514,6.01e-07,2;UBERON:0002148,7.58e-07,2;UBERON:0006331,7.58e-07,2;UBERON:0009662,7.58e-07,2;UBERON:0001897,9.02e-07,2;UBERON:0010225,9.02e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369363174230364,0,0,3.43483184557268,0.547497700291537,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.1810540212873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0.168776332241266,0,0,0.0920498986422993,0.161646056818812,0.355009592516614,0,0,0,0,0,0.365921118388786,0,0.232387885739037,0.414644220061482,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.0079613260152,7.8083912314573,10.8260433788877,9.54842712405788,14.0346525363696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260650843404249,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0.154209693802656,0,0.164254312027618,0,0,0.120859449591622,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,54.6781206271464,76.1021542780874,0,0,0.211125408127993,0.19924798825107,0.828851746593443,0,0,0,0,0,0,0,0.0986434056369336,0,0,98.8719401017123,49.4453963202667,27.9459317201672,0.520855522170466,0,0,0,0,0,2.06846023944879,0,1.73624994933292,39.8583623616228,71.0313023503653,24.4130778107333,34.1689913187484,25.1215476110515,57.0402032600329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0,33.7005664903385,0,65.3597803573696,0,0,0,0,0,19.8947295059819,1.39010475182674,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.29536760149002,5.42353777873278,0,0,57.1696487481585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,55.8390868500104,37.9227899530821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,59.6422267356977,76.9549244530402,0,0.137539436597234,0.415440338029185,0,0,66.8852618804852,0,0,0,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0,0,0,0,46.024732464712,40.3309435315204,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,51.3919544380852,65.1620254576483,51.0778997282519,26.3768230017433,27.7322628842131,36.6989741383576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,55.3033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55788742607303,0,0,0.873677105536111,0,0,0,0,0,0,0.80057074828547,0,0,64.6146004470383,32.5902125548845,56.989287683403,52.5097892456333,21.6781658750678,54.4959149418037,58.4541837187301,4.28308260777463,0,0,0,0,0,0,0,0,0,0,0,0,0,58.4200106949114,42.1782173251478,67.1732088628848,49.9082426226047,24.6138664058199,0,0,0,0,11.249738553444,6.72567444437648,0,1.36597314810779,0,0,0,26.236316929057,52.4209005295907,0,0,0,71.8018245916129,0,0.913158720509496,0,0,2.287249413653,5.68849002237816,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07028081699812,0.11294608203896,2.08886981816315,0,0,0,0,0,0,26.1090261262877,26.1400832287836,19.019507741253,0,0.0939839179798536,0,0,0,0,0,0,0,13.4739208162364,0,63.4360603481234,9.5997151874883,0,0.371995018166751,0.462175628631418,0.865253124247578,0,0.109265571963696,0,0.203977659483963,0,0.18378979906969,0,0,0,40.6293025334802,36.6152805351109,0,0.476128862927481,0,0,0,0,0,0,0,0.336760265072938,0.0717222053926763,0.665320713092027,0,0,0,0,0,0.244482888365733,0,0,0.402547587182052,0 | |||
|short_description=p2@SLC1A2 | |||
}} |
Revision as of 07:19, 11 January 2014
Short description: | p2@SLC1A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SLC1A2_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -102bp_to_ENST00000278379_5end |
EntrezGene: | SLC1A2 |
HGNC: | 10940 |
UniProt: | P43004 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 4.58e-08 | 8 |