FFCP PHASE1:Hg19::chr1:156107837..156107850,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=4000 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=6636 | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=-428bp_to_uc010phb.1_5end | |||
|coexpression_cluster_id=C12 | |||
|description=CAGE_peak_36_at_LMNA_5end | |||
|id=chr1:156107837..156107850,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000097;2.88e-22;5!CL:0000163;1.19e-12;9!CL:0000624;1.08e-08;6!CL:0002620;2.49e-08;23!CL:0000047;4.04e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,2.68e-22,5;CL:0002028,2.68e-22,5;CL:0000163,1.15e-12,9;CL:0000624,1.13e-08,6;CL:0002620,2.97e-08,23 | |||
|ontology_enrichment_development_v019=UBERON:0003099;5.70e-13;1!UBERON:0003852;5.70e-13;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;2.97e-10;5!DOID:450;2.97e-10;5!DOID:66;2.97e-10;5!DOID:423;2.97e-10;5!DOID:0080000;2.97e-10;5!DOID:11722;2.97e-10;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,3.59e-10,5;DOID:450,3.59e-10,5;DOID:66,3.59e-10,5;DOID:423,3.59e-10,5;DOID:0080000,3.59e-10,5;DOID:11722,3.59e-10,5 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001389;5.70e-13;1!UBERON:0005705;5.70e-13;1!UBERON:0000026;5.70e-13;1!UBERON:0008784;5.70e-13;1!UBERON:0006058;5.70e-13;1!UBERON:0003663;5.70e-13;1!UBERON:0004256;5.70e-13;1!UBERON:0008193;5.70e-13;1!UBERON:0010912;5.70e-13;1!UBERON:0004708;5.70e-13;1!UBERON:0002101;5.70e-13;1!UBERON:0004709;5.70e-13;1!UBERON:0002514;5.70e-13;1!UBERON:0003457;5.70e-13;1!UBERON:0008907;5.70e-13;1!UBERON:0008001;5.70e-13;1!UBERON:0002529;5.70e-13;1!UBERON:0010538;5.70e-13;1!UBERON:0007213;5.70e-13;1!UBERON:0009891;5.70e-13;1!UBERON:0007914;5.70e-13;1!UBERON:0003661;5.70e-13;1!UBERON:0010890;5.70e-13;1!UBERON:0002471;5.70e-13;1!UBERON:0001383;5.70e-13;1!UBERON:0007375;5.70e-13;1!UBERON:0003323;5.70e-13;1!UBERON:0010258;5.70e-13;1!UBERON:0005253;5.70e-13;1!UBERON:0007842;5.70e-13;1!UBERON:0010758;5.70e-13;1!UBERON:0010707;5.70e-13;1!UBERON:0000978;5.70e-13;1!UBERON:0002103;5.70e-13;1!UBERON:0001665;5.70e-13;1!UBERON:0003823;5.70e-13;1!UBERON:0000154;5.70e-13;1!UBERON:0010709;5.70e-13;1!UBERON:0002397;5.70e-13;1!UBERON:0003113;5.70e-13;1!UBERON:0003277;5.70e-13;1!UBERON:0001709;5.70e-13;1!UBERON:0002244;5.70e-13;1!UBERON:0005620;5.70e-13;1!UBERON:0010364;5.70e-13;1!UBERON:0004288;5.70e-13;1!UBERON:0005090;4.04e-07;2!UBERON:0001630;4.04e-07;2!UBERON:0004089;4.04e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005705,3.76e-13,1;UBERON:0008193,3.76e-13,1;UBERON:0010912,3.76e-13,1;UBERON:0002514,3.76e-13,1;UBERON:0003457,3.76e-13,1;UBERON:0008907,3.76e-13,1;UBERON:0008001,3.76e-13,1;UBERON:0007213,3.76e-13,1;UBERON:0009891,3.76e-13,1;UBERON:0007914,3.76e-13,1;UBERON:0009292,3.76e-13,1;UBERON:0003099,3.76e-13,1;UBERON:0007375,3.76e-13,1;UBERON:0003323,3.76e-13,1;UBERON:0010258,3.76e-13,1;UBERON:0007842,3.76e-13,1;UBERON:0009494,3.76e-13,1;UBERON:0010042,3.76e-13,1;UBERON:0010045,3.76e-13,1;UBERON:0010259,3.76e-13,1;UBERON:0010359,3.76e-13,1;UBERON:0009526,3.76e-13,1;UBERON:0002397,3.76e-13,1;UBERON:0003113,3.76e-13,1;UBERON:0003277,3.76e-13,1;UBERON:0001709,3.76e-13,1;UBERON:0004066,3.76e-13,1;UBERON:0002244,3.76e-13,1;UBERON:0005620,3.76e-13,1;UBERON:0004362,3.76e-13,1;UBERON:0010364,3.76e-13,1;UBERON:0010046,3.76e-13,1;UBERON:0005868,3.76e-13,1;UBERON:0007238,3.76e-13,1;UBERON:0004288,3.76e-13,1;UBERON:0004068,3.76e-13,1;UBERON:0010334,3.76e-13,1;UBERON:0003852,3.76e-13,1;UBERON:0010253,3.76e-13,1;UBERON:0005418,5.38e-13,1;UBERON:0001389,5.38e-13,1;UBERON:0000026,5.38e-13,1;UBERON:0008784,5.38e-13,1;UBERON:0006058,5.38e-13,1;UBERON:0003663,5.38e-13,1;UBERON:0004256,5.38e-13,1;UBERON:0004708,5.38e-13,1;UBERON:0002101,5.38e-13,1;UBERON:0004709,5.38e-13,1;UBERON:0002529,5.38e-13,1;UBERON:0010538,5.38e-13,1;UBERON:0003661,5.38e-13,1;UBERON:0010890,5.38e-13,1;UBERON:0002471,5.38e-13,1;UBERON:0001383,5.38e-13,1;UBERON:0004357,5.38e-13,1;UBERON:0004347,5.38e-13,1;UBERON:0005420,5.38e-13,1;UBERON:0005732,5.38e-13,1;UBERON:0010758,5.38e-13,1;UBERON:0010707,5.38e-13,1;UBERON:0000978,5.38e-13,1;UBERON:0002103,5.38e-13,1;UBERON:0001665,5.38e-13,1;UBERON:0003823,5.38e-13,1;UBERON:0000154,5.38e-13,1;UBERON:0010709,5.38e-13,1;UBERON:0005733,5.38e-13,1;UBERON:0005730,5.38e-13,1;UBERON:0005253,3.28e-07,2;UBERON:0004089,3.28e-07,2;UBERON:0005090,3.93e-07,2;UBERON:0001630,3.93e-07,2;UBERON:0002097,5.63e-07,41 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.401088894940283,0.217010870715852,0,0,0,0.290796477559129,0.755751887377619,0.242584061187816,0,0,0,0,0.512321413058201,0.709446689665756,0,0,0,0.376484679085209,0.545812300115692,0.224723484445085,0,0,0,0,0.398927315243264,0,0.290209238628584,0,0,0.502497330513487,0,0.434377689410233,0,0,0,0.211255286311942,0.425208599930087,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0.382273228125229,0,0,0,0,1.57204305099666,1.02800749499755,0,0,0,0,0,0.294605907474837,0.443067789167242,0.270803863765016,0,0.130059347559878,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0.604820229674197,3.20928234940209,0.868946423296794,0,0,0,0,0,0.144846518960824,0,0,0.0945348171640679,0,0,0,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0.12663051166458,0.132409180813219,0.573673241497627,0,0.560677600142307,0,0,0,0,0,0,0,0,0.312160076830321,0,0.149448680551801,0,0,0,0,0.245668634623536,0.103325781175765,0,0,0,0,0.168336113954066,0,0,0.438977620880838,0,0.150238058906597,0.113432183160021,1.25572744982203,0,0,1.20036438433761,0,0.772921620136887,0.18611685633159,0.506328996723799,0,1.26216887122057,0.0920498986422993,0,1.06502877754984,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,1.38134921352481,0,0,0,0,0,0.330881918197182,0,0,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.25648404392702,2.73827911492227,2.39860623510122,0,0,0,1.71072446022705,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0.394061520403854,2.37190332345469,0.128343036279748,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0.215714200818617,0.426910231213777,0,0,0.30239029332968,0,0,0,0,0,0.160853921143607,0,0.154209693802656,0,0,0,0.116210378459959,0,0.40101294060657,0.184161977871793,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0.270946437543853,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0.154048617114644,0,0,0.107420244868274,0,0,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0.211107635297664,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.293016358543788,0,0,0,0.23874448473769,0.296964680832639,0.307160702099232,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0.260427761085233,0.0874599999961957,0,0,0.508507300585533,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.0769502585037971,0,0,0.0897576444097721,0,0.31900115973192,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0.293977192243133,0,0,0.343972064943233,0,0,0,0.0969890164884194,0,0,0,0.19871461170299,0,0,0.0801588202515337,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0.288950589901519,0,0.136905378891993,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,0,0,0,0.211200673038813,0.179287339332845,0,0,0,0,0,0.864221491201268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0.327872630709804,0,0,0.122026264901963,0.1251909307065,0,0,0.0620964029413835,0.138348634936231,0,0,0,0,0,0,0,0,1.10961172300523,0.378806010550178,0,0,0,0.151230923763239,0.310874401165561,0,0,0,0,0.414706207840855,0,0,0,0,0,0.363697318405119,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.132864840313363,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0.215649622793364,0,0.109209638192014,0,0.212574920101683,0.247871528518004,0,0,0,0,1.41070377476274,0,0,0,0,0,0,0,0,0,0.196295437002051,0,0.550285795565037,0,0,0,0,0,0,0,0,0.327543835020193,0.147856086217045,0,0,0,0,0,0,0.992422356778588,0.175871244359621,0.127762427639595,0,0,0,0,0,0,0.342976018874837,0,0,0,0,0.156986185701028,0,0,0,0,0.9555033757741,0.0714765441766563,0,0,0,0,0.414432328326074,0,0,0,0,0,0,0.68732060563215,0,0,0,0,0.121917924982269,1.29485767437579,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0,0.0644578879735772,0,0.178553938605658,0,0.0802413666891683,0,0,0,0,0,0,0,0.371995018166751,0,0.865253124247578,0,0.109265571963696,0,0.101988829741982,0.26721740526556,0,0,0,0,0,0,0.426467963801962,0,0,0,0,0,0.202117188958219,0.435433495793923,0.342233301085281,0,0,0,0,0.320182037633146,0,0,0,0,0,0.665756774185513,0.201273793591026,0 | |||
|short_description=p36@LMNA | |||
}} |
Revision as of 21:23, 10 January 2014
Short description: | p36@LMNA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_36_at_LMNA_5end |
Coexpression cluster: | C12_Mast_Basophils_immature_chorionic_mature_CD14_Eosinophils |
Association with transcript: | -428bp_to_uc010phb.1_5end |
EntrezGene: | LMNA |
HGNC: | 6636 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 2.68e-22 | 5 |
basophil mast progenitor cell | 2.68e-22 | 5 |
endocrine cell | 1.15e-12 | 9 |
CD4-positive, alpha-beta T cell | 1.13e-08 | 6 |
skin fibroblast | 2.97e-08 | 23 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 3.59e-10 | 5 |
myotonic disease | 3.59e-10 | 5 |
muscle tissue disease | 3.59e-10 | 5 |
myopathy | 3.59e-10 | 5 |
muscular disease | 3.59e-10 | 5 |
myotonic dystrophy | 3.59e-10 | 5 |