FFCP PHASE1:Mm9::chr5:66252500..66252557,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=74734|HGNC=|MCL_coexpression_id=51|UniProt=Q504M6|association_with_transcript=41bp_to_uc008xoc.1_5end|description=CAGE_peak_2_at_Rhoh_5end|id=chr5:66252500..66252557,+|ontology_enrichment_celltype=CL:0000791!2.85e-10!9;CL:0000789!2.85e-10!9;CL:0002420!2.85e-10!9;CL:0002419!2.85e-10!9;CL:0000790!2.85e-10!9;CL:0000624!4.13e-09!8;CL:0000838!4.66e-09!12;CL:0000542!3.74e-08!13;CL:0000051!3.74e-08!13;CL:0000084!5.59e-08!11;CL:0000827!5.59e-08!11;CL:0002031!1.18e-07!25;CL:0000893!6.85e-07!6;CL:0002489!6.85e-07!6;CL:0000898!6.85e-07!6;CL:0000809!6.85e-07!6;CL:0000810!6.85e-07!6;CL:0000895!6.85e-07!6;CL:0000808!6.85e-07!6;CL:0000894!6.85e-07!6;CL:0000806!6.85e-07!6;CL:0000807!6.85e-07!6;CL:0000805!6.85e-07!6;CL:0002425!6.85e-07!6;CL:0002436!6.85e-07!6;CL:0002427!6.85e-07!6;CL:0002428!6.85e-07!6;CL:0002429!6.85e-07!6;CL:0002433!6.85e-07!6;CL:0002431!6.85e-07!6;CL:0002432!6.85e-07!6|ontology_enrichment_celltype_v019_2=CL:0000838,8.94e-14,12;CL:0000791,1.01e-13,9;CL:0000789,1.01e-13,9;CL:0002420,1.01e-13,9;CL:0002419,1.01e-13,9;CL:0000790,1.01e-13,9;CL:0000542,1.17e-12,13;CL:0000051,1.17e-12,13;CL:0000084,3.84e-11,11;CL:0000827,3.84e-11,11;CL:0000624,7.58e-11,8;CL:0000738,1.70e-09,17;CL:0002087,1.70e-09,17|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002370!1.95e-20!23;UBERON:0000974!1.95e-20!23;UBERON:0004807!1.95e-20!23;UBERON:0005058!1.95e-20!23;UBERON:0003351!1.95e-20!23;UBERON:0009113!1.95e-20!23;UBERON:0003295!1.95e-20!23;UBERON:0009722!1.95e-20!23;UBERON:0005562!1.95e-20!23;UBERON:0007690!1.95e-20!23;UBERON:0006562!2.76e-19!24;UBERON:0003408!2.76e-19!24;UBERON:0001557!2.76e-19!24;UBERON:0001042!2.76e-19!24;UBERON:0008814!2.76e-19!24;UBERON:0009145!2.76e-19!24;UBERON:0004177!4.99e-18!29;UBERON:0000072!2.36e-16!27;UBERON:0002390!9.72e-15!45;UBERON:0003061!9.72e-15!45;UBERON:0002193!1.31e-14!48;UBERON:0003081!6.83e-13!88;UBERON:0000063!2.82e-12!35;UBERON:0000065!1.52e-11!41;UBERON:0001004!4.29e-11!42;UBERON:0005057!4.58e-09!51;UBERON:0002405!5.78e-09!70;UBERON:0002368!7.40e-08!60|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.17e-45,23;UBERON:0000974,2.17e-45,23;UBERON:0004807,2.17e-45,23;UBERON:0005058,2.17e-45,23;UBERON:0003351,2.17e-45,23;UBERON:0009113,2.17e-45,23;UBERON:0003295,2.17e-45,23;UBERON:0009722,2.17e-45,23;UBERON:0005562,2.17e-45,23;UBERON:0007690,2.17e-45,23;UBERON:0006562,2.25e-43,24;UBERON:0003408,2.25e-43,24;UBERON:0001557,2.25e-43,24;UBERON:0001042,2.25e-43,24;UBERON:0008814,2.25e-43,24;UBERON:0009145,2.25e-43,24;UBERON:0000072,3.22e-38,27;UBERON:0004177,2.25e-35,29;UBERON:0005057,2.25e-35,29;UBERON:0000077,8.74e-29,35;UBERON:0007811,6.71e-28,36;UBERON:0000065,4.05e-24,41;UBERON:0001004,1.80e-23,42;UBERON:0000153,7.48e-23,43;UBERON:0002193,1.16e-22,48;UBERON:0002405,1.16e-22,48;UBERON:0002390,1.07e-21,45;UBERON:0003061,1.07e-21,45;UBERON:0003929,3.51e-17,55;UBERON:0002368,1.74e-15,60;UBERON:0002530,4.75e-14,65;UBERON:0000490,8.67e-14,66;UBERON:0005911,4.74e-13,69;UBERON:0003081,1.92e-12,87;UBERON:0000949,2.26e-12,72;UBERON:0001041,8.15e-11,80;UBERON:0000926,4.73e-08,120;UBERON:0004120,4.73e-08,120;UBERON:0006603,4.73e-08,120;UBERON:0001048,7.75e-07,134|phase1_expression=0,0,0,0,0,0,0,1.80772652818207,1.97104211012333,1.40438715793196,0.513653904676515,0.0797721589953364,1.19840510951844,0.524522414513984,0.333109761815663,0.202475267389826,0,0.473193248037357,0.685572168028694,0.84877930359606,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.69791296961662,2.17608642603403,8.73843877770406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.22836775943812,1.29468941823586,0,0.173485326766136,0,0,0,0,0.125666591329675,0,0.144599356919912,1.76922110389975,0.161766849947409,1.10420759230197,0.969750506270444,0,0,0,0.255457055208591,0,0,0.127070227073065,0,0,0,0,0,0,0,0.101839363850316,0.622034853050465,0,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0.700592054203017,0,0.164167464079095,0,0.146199987425332,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.810676133875177,0.823684239564244,0,0,0,0,0,0,0,0,0,0,0,0.502518772325447,0,0.195133647857799,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376736914009382,0,0.457556346413045,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,11.3764003426144,3.44632865993279,11.6063381596255,21.566856614314,27.7491378284596,30.7956099910961,20.3130309688747,18.3135013696476,20.496189339474,23.77652367636,17.039625288126,12.8644402576473,16.5484367621367,27.3491951104871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0.252697211763798,0.25347929989024,0.188626341386076,0.0936415074698824,0.256100609619477,0.34461281373368,0.952587382566147,0.115884325944855,0,0,0.147198920134397,0,0,0,0.145346416632329,0.564656282491984,0.169229215783353,0.548783918618318,0.526139422875686,0.135804113845862,0,0,0.197008964751127,0.409231043169689,0.154936841185966,0.578719832943424,0,0.467863216890817,0.644613162144895,0,0,0|short_description=p2@Rhoh}} | ||
|EntrezGene=74734 | |||
|HGNC= | |||
|MCL_coexpression_id=51 | |||
|UniProt=Q504M6 | |||
|association_with_transcript=41bp_to_uc008xoc.1_5end | |||
|description=CAGE_peak_2_at_Rhoh_5end | |||
|id=chr5:66252500..66252557,+ | |||
|ontology_enrichment_celltype=CL:0000791!2.85e-10!9;CL:0000789!2.85e-10!9;CL:0002420!2.85e-10!9;CL:0002419!2.85e-10!9;CL:0000790!2.85e-10!9;CL:0000624!4.13e-09!8;CL:0000838!4.66e-09!12;CL:0000542!3.74e-08!13;CL:0000051!3.74e-08!13;CL:0000084!5.59e-08!11;CL:0000827!5.59e-08!11;CL:0002031!1.18e-07!25;CL:0000893!6.85e-07!6;CL:0002489!6.85e-07!6;CL:0000898!6.85e-07!6;CL:0000809!6.85e-07!6;CL:0000810!6.85e-07!6;CL:0000895!6.85e-07!6;CL:0000808!6.85e-07!6;CL:0000894!6.85e-07!6;CL:0000806!6.85e-07!6;CL:0000807!6.85e-07!6;CL:0000805!6.85e-07!6;CL:0002425!6.85e-07!6;CL:0002436!6.85e-07!6;CL:0002427!6.85e-07!6;CL:0002428!6.85e-07!6;CL:0002429!6.85e-07!6;CL:0002433!6.85e-07!6;CL:0002431!6.85e-07!6;CL:0002432!6.85e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,8.94e-14,12;CL:0000791,1.01e-13,9;CL:0000789,1.01e-13,9;CL:0002420,1.01e-13,9;CL:0002419,1.01e-13,9;CL:0000790,1.01e-13,9;CL:0000542,1.17e-12,13;CL:0000051,1.17e-12,13;CL:0000084,3.84e-11,11;CL:0000827,3.84e-11,11;CL:0000624,7.58e-11,8;CL:0000738,1.70e-09,17;CL:0002087,1.70e-09,17 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!1.95e-20!23;UBERON:0000974!1.95e-20!23;UBERON:0004807!1.95e-20!23;UBERON:0005058!1.95e-20!23;UBERON:0003351!1.95e-20!23;UBERON:0009113!1.95e-20!23;UBERON:0003295!1.95e-20!23;UBERON:0009722!1.95e-20!23;UBERON:0005562!1.95e-20!23;UBERON:0007690!1.95e-20!23;UBERON:0006562!2.76e-19!24;UBERON:0003408!2.76e-19!24;UBERON:0001557!2.76e-19!24;UBERON:0001042!2.76e-19!24;UBERON:0008814!2.76e-19!24;UBERON:0009145!2.76e-19!24;UBERON:0004177!4.99e-18!29;UBERON:0000072!2.36e-16!27;UBERON:0002390!9.72e-15!45;UBERON:0003061!9.72e-15!45;UBERON:0002193!1.31e-14!48;UBERON:0003081!6.83e-13!88;UBERON:0000063!2.82e-12!35;UBERON:0000065!1.52e-11!41;UBERON:0001004!4.29e-11!42;UBERON:0005057!4.58e-09!51;UBERON:0002405!5.78e-09!70;UBERON:0002368!7.40e-08!60 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.17e-45,23;UBERON:0000974,2.17e-45,23;UBERON:0004807,2.17e-45,23;UBERON:0005058,2.17e-45,23;UBERON:0003351,2.17e-45,23;UBERON:0009113,2.17e-45,23;UBERON:0003295,2.17e-45,23;UBERON:0009722,2.17e-45,23;UBERON:0005562,2.17e-45,23;UBERON:0007690,2.17e-45,23;UBERON:0006562,2.25e-43,24;UBERON:0003408,2.25e-43,24;UBERON:0001557,2.25e-43,24;UBERON:0001042,2.25e-43,24;UBERON:0008814,2.25e-43,24;UBERON:0009145,2.25e-43,24;UBERON:0000072,3.22e-38,27;UBERON:0004177,2.25e-35,29;UBERON:0005057,2.25e-35,29;UBERON:0000077,8.74e-29,35;UBERON:0007811,6.71e-28,36;UBERON:0000065,4.05e-24,41;UBERON:0001004,1.80e-23,42;UBERON:0000153,7.48e-23,43;UBERON:0002193,1.16e-22,48;UBERON:0002405,1.16e-22,48;UBERON:0002390,1.07e-21,45;UBERON:0003061,1.07e-21,45;UBERON:0003929,3.51e-17,55;UBERON:0002368,1.74e-15,60;UBERON:0002530,4.75e-14,65;UBERON:0000490,8.67e-14,66;UBERON:0005911,4.74e-13,69;UBERON:0003081,1.92e-12,87;UBERON:0000949,2.26e-12,72;UBERON:0001041,8.15e-11,80;UBERON:0000926,4.73e-08,120;UBERON:0004120,4.73e-08,120;UBERON:0006603,4.73e-08,120;UBERON:0001048,7.75e-07,134 | |||
|phase1_expression=0,0,0,0,0,0,0,1.80772652818207,1.97104211012333,1.40438715793196,0.513653904676515,0.0797721589953364,1.19840510951844,0.524522414513984,0.333109761815663,0.202475267389826,0,0.473193248037357,0.685572168028694,0.84877930359606,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.69791296961662,2.17608642603403,8.73843877770406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.22836775943812,1.29468941823586,0,0.173485326766136,0,0,0,0,0.125666591329675,0,0.144599356919912,1.76922110389975,0.161766849947409,1.10420759230197,0.969750506270444,0,0,0,0.255457055208591,0,0,0.127070227073065,0,0,0,0,0,0,0,0.101839363850316,0.622034853050465,0,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0.700592054203017,0,0.164167464079095,0,0.146199987425332,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.810676133875177,0.823684239564244,0,0,0,0,0,0,0,0,0,0,0,0.502518772325447,0,0.195133647857799,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376736914009382,0,0.457556346413045,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,11.3764003426144,3.44632865993279,11.6063381596255,21.566856614314,27.7491378284596,30.7956099910961,20.3130309688747,18.3135013696476,20.496189339474,23.77652367636,17.039625288126,12.8644402576473,16.5484367621367,27.3491951104871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0.252697211763798,0.25347929989024,0.188626341386076,0.0936415074698824,0.256100609619477,0.34461281373368,0.952587382566147,0.115884325944855,0,0,0.147198920134397,0,0,0,0.145346416632329,0.564656282491984,0.169229215783353,0.548783918618318,0.526139422875686,0.135804113845862,0,0,0.197008964751127,0.409231043169689,0.154936841185966,0.578719832943424,0,0.467863216890817,0.644613162144895,0,0,0 | |||
|short_description=p2@Rhoh | |||
}} |
Revision as of 07:52, 14 September 2013
Short description: | p2@Rhoh |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Rhoh_5end |
Coexpression cluster: | MCL_coexpression_mm9:51 |
Association with transcript: | 41bp_to_uc008xoc.1_5end |
EntrezGene: | Rhoh |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 8.94e-14 | 12 |
mature alpha-beta T cell | 1.01e-13 | 9 |
alpha-beta T cell | 1.01e-13 | 9 |
immature T cell | 1.01e-13 | 9 |
mature T cell | 1.01e-13 | 9 |
immature alpha-beta T cell | 1.01e-13 | 9 |
lymphocyte | 1.17e-12 | 13 |
common lymphoid progenitor | 1.17e-12 | 13 |
T cell | 3.84e-11 | 11 |
pro-T cell | 3.84e-11 | 11 |
CD4-positive, alpha-beta T cell | 7.58e-11 | 8 |
leukocyte | 1.70e-09 | 17 |
nongranular leukocyte | 1.70e-09 | 17 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.