FFCP PHASE1:Mm9::chr1:12982731..12982747,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=185|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:12982731..12982747,-|id=chr1:12982731..12982747,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000120,7.35e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000020!5.17e-09!12;UBERON:0001032!5.17e-09!12;UBERON:0004456!5.17e-09!12;UBERON:0000970!5.30e-07!9;UBERON:0000019!5.30e-07!9;UBERON:0000047!5.30e-07!9;UBERON:0004088!5.30e-07!9;UBERON:0002104!5.30e-07!9;UBERON:0001456!5.30e-07!9;UBERON:0003072!5.30e-07!9;UBERON:0003071!5.30e-07!9;UBERON:0004128!5.30e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0000020,4.24e-17,12;UBERON:0001032,4.24e-17,12;UBERON:0004456,4.24e-17,12;UBERON:0000033,1.25e-15,13;UBERON:0001444,5.03e-15,11;UBERON:0000970,2.21e-14,9;UBERON:0000019,2.21e-14,9;UBERON:0000047,2.21e-14,9;UBERON:0010312,2.21e-14,9;UBERON:0004088,2.21e-14,9;UBERON:0002104,2.21e-14,9;UBERON:0001456,2.21e-14,9;UBERON:0003072,2.21e-14,9;UBERON:0004128,2.21e-14,9;UBERON:0003071,2.21e-14,9;UBERON:0005418,1.99e-12,5;UBERON:0002472,1.99e-12,5;UBERON:0008784,1.99e-12,5;UBERON:0006058,1.99e-12,5;UBERON:0004709,1.99e-12,5;UBERON:0002529,1.99e-12,5;UBERON:0010538,1.99e-12,5;UBERON:0005420,1.99e-12,5;UBERON:0010758,1.99e-12,5;UBERON:0000978,1.99e-12,5;UBERON:0002103,1.99e-12,5;UBERON:0000376,1.99e-12,5;UBERON:0000154,1.99e-12,5;UBERON:0010709,1.99e-12,5;UBERON:0005730,1.99e-12,5;UBERON:0005085,2.61e-12,13;UBERON:0005795,3.43e-10,4;UBERON:0000995,3.43e-10,4;UBERON:0000075,4.50e-10,6;UBERON:0005856,4.50e-10,6;UBERON:0005866,4.50e-10,6;UBERON:0005863,4.50e-10,6;UBERON:0000981,5.26e-10,4;UBERON:0003608,5.26e-10,4;UBERON:0003826,5.26e-10,4;UBERON:0008202,5.26e-10,4;UBERON:0004381,5.26e-10,4;UBERON:0007273,5.26e-10,4;UBERON:0010912,5.26e-10,4;UBERON:0002513,5.26e-10,4;UBERON:0004375,5.26e-10,4;UBERON:0010740,5.26e-10,4;UBERON:0010363,5.26e-10,4;UBERON:0003860,5.26e-10,4;UBERON:0002428,5.26e-10,4;UBERON:0010742,5.26e-10,4;UBERON:0002495,5.26e-10,4;UBERON:0003464,5.26e-10,4;UBERON:0003606,5.26e-10,4;UBERON:0005893,5.26e-10,4;UBERON:0009749,5.26e-10,4;UBERON:0010712,5.26e-10,4;UBERON:0010886,5.26e-10,4;UBERON:0005254,5.26e-10,4;UBERON:0010885,5.26e-10,4;UBERON:0010881,5.26e-10,4;UBERON:0010882,5.26e-10,4;UBERON:0007844,5.26e-10,4;UBERON:0001441,5.26e-10,4;UBERON:0011249,5.26e-10,4;UBERON:0002091,5.26e-10,4;UBERON:0003285,5.26e-10,4;UBERON:0004288,5.26e-10,4;UBERON:0010129,5.26e-10,4;UBERON:0006234,5.26e-10,4;UBERON:0003975,3.87e-08,5;UBERON:0003102,2.58e-07,22|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0.157731082679119,0.137114433605739,0.42438965179803,0.17008658030214,0,0,0,0,0.57423196411502,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41621522601718,2.64495489636016,2.53532561402472,0,0,0,0,0,0,0.384218305321555,0.622137673850866,0.540023753326763,0.630974884054146,0,0,1.22490799214954,0.575072826109418,0.919218786610021,0,0,0,1.45074916503213,1.09785172322892,0.52091337055676,0,0,0,1.17851434189467,0.284743361598206,0.745597783301202,0.832988126665025,0.0755715601067855,0,0,0,0,0,0,1.12355536105401,0,0,0,2.39433813620357,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0.148442139064825,0,0.304465478312141,0.230615497256059,0.150722640552623,0.352766121407114,0.125666591329675,0.247194967734374,0.144599356919912,1.76922110389975,1.13236794963186,4.85851340612866,4.84875253135222,0,0,0,0,0,0,0,0.449371918214468,0.457500602818626,0.628271760564322,0.173824320192276,0,0.20778804455956,0,0.101839363850316,0.622034853050465,0,1.26265113531884,1.04096354370163,1.83921683546778,1.62055916824814,0.90422890701429,1.02054748726992,1.92170580427275,1.12442069471675,1.81092359517311,0,0.567318240503458,0,0.219195732427575,0,0.348252166522167,0,0,0,0,0,0.207125772535502,0,0.36012412292203,0,0,0,0,0.268273401399619,0.116765342367169,0,0.492502392237286,1.21603214318784,1.90059983652932,0.878200461164203,2.54992195644706,0,0.102904612379284,0,0,0.426576501070468,0.696710015581316,0,0,0,0.190225626112559,0.474529061544512,0,0,0,0,0,0.216138049874694,0,0.569003702859245,0.114248512609729,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0.179397413521912,0,0.554259570499814,0,0,0.169745085775188,0,0.167506257441816,0.238043640886014,0.390267295715598,0.788175720530955,0.44292937929755,0.159454768657487,1.63863314715738,0.518054945597687,0.289298117163023,0,0,0,0,0,0.234423373184406,0,18.1779067587149,0.631016438832513,0,0.215423397732799,0.477937595905104,0,0,0,0.584511715822624,0,4.4984984299053,0.567760340833074,0.534196811001766,0.162886959353576,1.48473110675282,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0.720244376125241,0.258717367565509,0,0.354680467284547,0.535106452806212,0.164549020602121,0,3.05073220482823,1.48282449604674,0,1.81374878235628,0.161464426695906,0.542816324353403,1.07435109602823,1.64140899745061,0.291480836629851,0.556275906031529,0.170870880797853,0,0,0.188368457004691,0.27338845544205,0.457556346413045,0.339956859987711,0.139951452323658,0,0,0,0.406638934253697,0,0.418176592028937,0.436725127492355,0.269728692769641,0.330613822901344,0.785267825952089,0,0,0,0,0,0,0,0,0,0,0,0,1.15212002503146,0,0.202725215290164,0.308132871494482,0.77952493786677,0.358053391334963,0.596044064343795,0,0.295379054349154,0.201932899896295,0.304827226619999,0,0.38983152295901,0.192423683280659,0,15.8711268530648,0,0,0,0,3.75364950902364,2.01466786693992,0.857473516316263,0,0,0,0,0,0,0,0,0,0,0,0.518936737920883,0.798049746802062,0.341467211508268,0.972426868273176,0.419226325255965,0,0.666740183404846,0,0,0.505394423527595,0.760437899670719,0.377252682772152,0.280924522409647,0.384150914429216,0.516919220600519,0.476293691283074,0.463537303779422,0.578727661391115,1.23625770240992,0.735994600671987,0.342869252385415,0.354951612318675,0.715308569841963,0.145346416632329,0.188218760830661,0.507687647350059,0.182927972872773,0,0.135804113845862,0.561142271657738,0.355905054372522,0.591026894253381,0.409231043169689,0.464810523557898,0.192906610981141,0,0.467863216890817,0.644613162144895,0.956441660344217,1.76473135295612,3.70988536992674|short_description=p@chr1:12982731..12982747,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=185 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:12982731..12982747,- | |||
|id=chr1:12982731..12982747,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000120,7.35e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000020!5.17e-09!12;UBERON:0001032!5.17e-09!12;UBERON:0004456!5.17e-09!12;UBERON:0000970!5.30e-07!9;UBERON:0000019!5.30e-07!9;UBERON:0000047!5.30e-07!9;UBERON:0004088!5.30e-07!9;UBERON:0002104!5.30e-07!9;UBERON:0001456!5.30e-07!9;UBERON:0003072!5.30e-07!9;UBERON:0003071!5.30e-07!9;UBERON:0004128!5.30e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000020,4.24e-17,12;UBERON:0001032,4.24e-17,12;UBERON:0004456,4.24e-17,12;UBERON:0000033,1.25e-15,13;UBERON:0001444,5.03e-15,11;UBERON:0000970,2.21e-14,9;UBERON:0000019,2.21e-14,9;UBERON:0000047,2.21e-14,9;UBERON:0010312,2.21e-14,9;UBERON:0004088,2.21e-14,9;UBERON:0002104,2.21e-14,9;UBERON:0001456,2.21e-14,9;UBERON:0003072,2.21e-14,9;UBERON:0004128,2.21e-14,9;UBERON:0003071,2.21e-14,9;UBERON:0005418,1.99e-12,5;UBERON:0002472,1.99e-12,5;UBERON:0008784,1.99e-12,5;UBERON:0006058,1.99e-12,5;UBERON:0004709,1.99e-12,5;UBERON:0002529,1.99e-12,5;UBERON:0010538,1.99e-12,5;UBERON:0005420,1.99e-12,5;UBERON:0010758,1.99e-12,5;UBERON:0000978,1.99e-12,5;UBERON:0002103,1.99e-12,5;UBERON:0000376,1.99e-12,5;UBERON:0000154,1.99e-12,5;UBERON:0010709,1.99e-12,5;UBERON:0005730,1.99e-12,5;UBERON:0005085,2.61e-12,13;UBERON:0005795,3.43e-10,4;UBERON:0000995,3.43e-10,4;UBERON:0000075,4.50e-10,6;UBERON:0005856,4.50e-10,6;UBERON:0005866,4.50e-10,6;UBERON:0005863,4.50e-10,6;UBERON:0000981,5.26e-10,4;UBERON:0003608,5.26e-10,4;UBERON:0003826,5.26e-10,4;UBERON:0008202,5.26e-10,4;UBERON:0004381,5.26e-10,4;UBERON:0007273,5.26e-10,4;UBERON:0010912,5.26e-10,4;UBERON:0002513,5.26e-10,4;UBERON:0004375,5.26e-10,4;UBERON:0010740,5.26e-10,4;UBERON:0010363,5.26e-10,4;UBERON:0003860,5.26e-10,4;UBERON:0002428,5.26e-10,4;UBERON:0010742,5.26e-10,4;UBERON:0002495,5.26e-10,4;UBERON:0003464,5.26e-10,4;UBERON:0003606,5.26e-10,4;UBERON:0005893,5.26e-10,4;UBERON:0009749,5.26e-10,4;UBERON:0010712,5.26e-10,4;UBERON:0010886,5.26e-10,4;UBERON:0005254,5.26e-10,4;UBERON:0010885,5.26e-10,4;UBERON:0010881,5.26e-10,4;UBERON:0010882,5.26e-10,4;UBERON:0007844,5.26e-10,4;UBERON:0001441,5.26e-10,4;UBERON:0011249,5.26e-10,4;UBERON:0002091,5.26e-10,4;UBERON:0003285,5.26e-10,4;UBERON:0004288,5.26e-10,4;UBERON:0010129,5.26e-10,4;UBERON:0006234,5.26e-10,4;UBERON:0003975,3.87e-08,5;UBERON:0003102,2.58e-07,22 | |||
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0.157731082679119,0.137114433605739,0.42438965179803,0.17008658030214,0,0,0,0,0.57423196411502,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41621522601718,2.64495489636016,2.53532561402472,0,0,0,0,0,0,0.384218305321555,0.622137673850866,0.540023753326763,0.630974884054146,0,0,1.22490799214954,0.575072826109418,0.919218786610021,0,0,0,1.45074916503213,1.09785172322892,0.52091337055676,0,0,0,1.17851434189467,0.284743361598206,0.745597783301202,0.832988126665025,0.0755715601067855,0,0,0,0,0,0,1.12355536105401,0,0,0,2.39433813620357,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0.148442139064825,0,0.304465478312141,0.230615497256059,0.150722640552623,0.352766121407114,0.125666591329675,0.247194967734374,0.144599356919912,1.76922110389975,1.13236794963186,4.85851340612866,4.84875253135222,0,0,0,0,0,0,0,0.449371918214468,0.457500602818626,0.628271760564322,0.173824320192276,0,0.20778804455956,0,0.101839363850316,0.622034853050465,0,1.26265113531884,1.04096354370163,1.83921683546778,1.62055916824814,0.90422890701429,1.02054748726992,1.92170580427275,1.12442069471675,1.81092359517311,0,0.567318240503458,0,0.219195732427575,0,0.348252166522167,0,0,0,0,0,0.207125772535502,0,0.36012412292203,0,0,0,0,0.268273401399619,0.116765342367169,0,0.492502392237286,1.21603214318784,1.90059983652932,0.878200461164203,2.54992195644706,0,0.102904612379284,0,0,0.426576501070468,0.696710015581316,0,0,0,0.190225626112559,0.474529061544512,0,0,0,0,0,0.216138049874694,0,0.569003702859245,0.114248512609729,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0.179397413521912,0,0.554259570499814,0,0,0.169745085775188,0,0.167506257441816,0.238043640886014,0.390267295715598,0.788175720530955,0.44292937929755,0.159454768657487,1.63863314715738,0.518054945597687,0.289298117163023,0,0,0,0,0,0.234423373184406,0,18.1779067587149,0.631016438832513,0,0.215423397732799,0.477937595905104,0,0,0,0.584511715822624,0,4.4984984299053,0.567760340833074,0.534196811001766,0.162886959353576,1.48473110675282,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0.720244376125241,0.258717367565509,0,0.354680467284547,0.535106452806212,0.164549020602121,0,3.05073220482823,1.48282449604674,0,1.81374878235628,0.161464426695906,0.542816324353403,1.07435109602823,1.64140899745061,0.291480836629851,0.556275906031529,0.170870880797853,0,0,0.188368457004691,0.27338845544205,0.457556346413045,0.339956859987711,0.139951452323658,0,0,0,0.406638934253697,0,0.418176592028937,0.436725127492355,0.269728692769641,0.330613822901344,0.785267825952089,0,0,0,0,0,0,0,0,0,0,0,0,1.15212002503146,0,0.202725215290164,0.308132871494482,0.77952493786677,0.358053391334963,0.596044064343795,0,0.295379054349154,0.201932899896295,0.304827226619999,0,0.38983152295901,0.192423683280659,0,15.8711268530648,0,0,0,0,3.75364950902364,2.01466786693992,0.857473516316263,0,0,0,0,0,0,0,0,0,0,0,0.518936737920883,0.798049746802062,0.341467211508268,0.972426868273176,0.419226325255965,0,0.666740183404846,0,0,0.505394423527595,0.760437899670719,0.377252682772152,0.280924522409647,0.384150914429216,0.516919220600519,0.476293691283074,0.463537303779422,0.578727661391115,1.23625770240992,0.735994600671987,0.342869252385415,0.354951612318675,0.715308569841963,0.145346416632329,0.188218760830661,0.507687647350059,0.182927972872773,0,0.135804113845862,0.561142271657738,0.355905054372522,0.591026894253381,0.409231043169689,0.464810523557898,0.192906610981141,0,0.467863216890817,0.644613162144895,0.956441660344217,1.76473135295612,3.70988536992674 | |||
|short_description=p@chr1:12982731..12982747,- | |||
}} |
Revision as of 18:42, 13 September 2013
Short description: | p@chr1:12982731..12982747, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:12982731..12982747, - |
Coexpression cluster: | MCL_coexpression_mm9:185 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granule cell | 7.35e-08 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.