FFCP PHASE1:Mm9::chr19:57193346..57193358,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=226251|HGNC=|MCL_coexpression_id=18|UniProt=E9Q9Q7|association_with_transcript=44bp_to_ENSMUST00000111526_5end|description=CAGE_peak_6_at_Ablim1_5end|id=chr19:57193346..57193358,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000553,2.52e-07,6;CL:0000556,2.52e-07,6;CL:0002031,6.87e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!1.34e-09!29;UBERON:0002193!2.16e-08!48;UBERON:0003408!9.36e-08!24;UBERON:0006562!1.27e-07!24;UBERON:0001557!1.27e-07!24;UBERON:0001042!1.27e-07!24;UBERON:0008814!1.27e-07!24;UBERON:0009145!1.27e-07!24;UBERON:0002370!3.03e-07!23;UBERON:0000974!3.03e-07!23;UBERON:0004807!3.03e-07!23;UBERON:0005058!3.03e-07!23;UBERON:0003351!3.03e-07!23;UBERON:0009113!3.03e-07!23;UBERON:0003295!3.03e-07!23;UBERON:0009722!3.03e-07!23;UBERON:0005562!3.03e-07!23;UBERON:0007690!3.03e-07!23;UBERON:0001004!5.41e-07!42;UBERON:0002390!6.27e-07!45;UBERON:0003061!6.27e-07!45|ontology_enrichment_uberon_v019_2=UBERON:0002193,9.82e-15,48;UBERON:0002405,9.82e-15,48;UBERON:0004177,1.70e-13,29;UBERON:0005057,1.70e-13,29;UBERON:0002390,2.46e-12,45;UBERON:0003061,2.46e-12,45;UBERON:0000077,6.18e-11,35;UBERON:0003408,9.02e-11,24;UBERON:0006562,1.42e-10,24;UBERON:0001557,1.42e-10,24;UBERON:0001042,1.42e-10,24;UBERON:0008814,1.42e-10,24;UBERON:0009145,1.42e-10,24;UBERON:0002370,5.14e-10,23;UBERON:0000974,5.14e-10,23;UBERON:0004807,5.14e-10,23;UBERON:0005058,5.14e-10,23;UBERON:0003351,5.14e-10,23;UBERON:0009113,5.14e-10,23;UBERON:0003295,5.14e-10,23;UBERON:0009722,5.14e-10,23;UBERON:0005562,5.14e-10,23;UBERON:0007690,5.14e-10,23;UBERON:0001004,6.99e-10,42;UBERON:0000065,3.08e-09,41;UBERON:0001041,3.78e-09,80;UBERON:0000072,1.12e-08,27;UBERON:0003081,5.29e-08,87;UBERON:0007811,4.38e-07,36;UBERON:0000153,9.91e-07,43|phase1_expression=0.640595388419176,0,0,0,0,0.16787927191189,0.233612640595526,3.35720640948098,5.91312633037,7.72412936862578,0.34243593645101,0.8774937489487,4.28001824828014,2.71003247498892,15.6561588053361,21.8673288781012,3.49780939064073,132.967302698497,123.265875811559,109.068140512094,1.36069264241712,1.19149141441062,1.04479915655574,12.9593862462659,7.57050627521661,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0.523523743973798,0,0,0.485510353031154,0.629484089877886,0.811015449756117,1.10128051297009,0,0.218025156380447,0,0,0.139986421625363,0,122.145737210032,3.62681071005672,7.39406358113421,0,0,0,0.202316460859598,0,0.633831403506179,0,0,0.449949858640699,0,0,0,0,0.103689612308478,0.135005938331691,0.210324961351382,0,1.10434270475807,0.367472397644862,0.0958454710182364,0,4.40463523997555,2.42605942361857,1.53606533256243,0.131886287730194,0.182975287204819,0,1.11673199600552,0.56276261003168,1.5279824777681,0.294628585473668,0.284743361598206,0.186399445825301,0.075726193333184,0,0.579728977403356,0,0,0,0,0,3.7919993435573,1.1930122580464,0.519572009205738,1.41335829804136,0.563373679106722,1.28326477414318,0,0,0,0.253359865475099,0.505524445014783,4.11061966988616,104.35196710981,0.445326417194474,0,0.304465478312141,0.230615497256059,0,1.05829836422134,0.125666591329675,0.494389935468748,2.4581890676385,7.07688441559899,1.29413479957927,9.05450225687614,13.5765070877862,1.86391761218122,0,0.628340120440365,1.27728527604296,0,0,0,1.04853447583376,1.37250180845588,0.251308704225729,0.695297280769106,0.511430914660661,1.45451631191692,0.486723789203273,0.407357455401265,11.8186622079588,0,1.26265113531884,0,0,0.360124259610698,0.753524089178575,0.204109497453984,0.2562274405697,0.468508622798644,1.03481348295606,0,0,0.175951124163949,0,1.94633074457919,1.39300866608867,1.23469281844766,0.59710280045548,0,0.257347907114715,0,0.414251545071004,0.234526059981096,0.180062061461015,0.23674473558521,0.393528463494808,0.154267112887378,0.232533944750408,0.268273401399619,0.350296027101508,0.658239399653922,0.492502392237286,1.13496333364198,0.877199924551994,0.219550115291051,1.20785776884335,0.630869845692382,0.720332286654991,1.32167513193519,0,0,0.232236671860439,0.38660238396628,0,0.22237804384487,0.190225626112559,1.42358718463353,0.164698954724011,0,0.994782360205754,0.974820435595601,0.898819408654221,1.08069024937347,0.597423819763102,0,0.685491075658373,1.1270773567308,0.814605311381257,0.387904974335251,1.05203729835478,0.505892296994058,0.442830443938806,0.784993639206874,0,0.296452627087149,0,0,0,1.01430060694251,1.20588579876208,1.2731292589071,2.30156909960649,2.7562988551756,3.0201755450689,5.75072826109418,0.372140947668503,0.624075346229121,0,0.717589654087649,0,5.91210208533135,0,0,0.339490171550376,0.469380496577004,0.167506257441816,0,0.585400943573396,1.41871629695572,2.43611158613652,2.87018583583477,5.40748938561935,6.56202931090403,1.73578870297814,0,0,0.983528546038072,4.13905119457099,2.56880943980467,1.17211686592203,0.163934945376675,0.757412781613119,0,0,0,0,0,0,0.404810701674894,0.584511715822624,0.790575555893047,0.642642632843614,1.13552068166615,0.890328018336276,1.30309567482861,0.989820737835213,2.65490276679926,0.242780636154981,0,0.565815239267694,0.295301892880773,0,0.516856586336442,0,0.712994756769443,1.26414703174326,2.10837217149998,0,0.340439605753788,0.36012218806262,0.388076051348264,0,0,0,0.164549020602121,0.304464949114599,0.469343416127421,0,0,1.81374878235628,0.968786560175433,1.99032652262914,1.90995750405018,2.62625439592098,0.874442509889552,0.556275906031529,23.0675689077101,0.206386867963223,3.1483069652851,10.7370020492674,36.2239703460717,29.5123843436414,0.509935289981566,0.839708713941948,2.07299960706636,0,0.474503990371703,0.406638934253697,0.756037385752609,0,0,1.21377911746339,1.32245529160537,1.83229159388821,0.648074866458964,5.59205381778233,0,0,0,0.194451188344048,0.129159823477731,0.337912250981556,0.234714477291508,0.13020438484395,0,0,0,3.16011120628178,7.29810775044591,9.34669710199928,4.80707045017842,2.8644271306797,1.39076948346885,2.28371354087941,2.95379054349154,2.22126189885925,1.295515713135,1.81487133246313,2.82627854145282,2.11666051608725,1.98690733708667,2.26730383615211,0,0,0,0.965947970160952,0.375364950902364,1.28206136987086,4.07299920250225,1.00314420807073,0,0,0,0.515559547031063,0,0,0.675022500231806,0.45032120322422,0,0,0.103787347584177,0,0.170733605754134,0.243106717068294,0.419226325255965,0.551530525350042,0.666740183404846,1.44224540067226,0.320919209591815,0,0.50695859978048,0.377252682772152,0.749132059759059,0.384150914429216,0.574354689556133,0,0.811190281613988,0.964546102318525,0.412085900803307,0.294397840268795,0.342869252385415,0.532427418478012,0.238436189947321,0.290692833264657,0.470546902076653,0.507687647350059,1.64635175585495,0.789209134313529,0.679020569229309,0,0.118635018124174,0.788035859004508,0.818462086339379,0.929621047115796,0.385813221962283,0.749431733813838,0.233931608445408,1.28922632428979,0.382576664137687,1.54413993383661,2.31867835620421|short_description=p6@Ablim1}} | ||
|EntrezGene=226251 | |||
|HGNC= | |||
|MCL_coexpression_id=18 | |||
|UniProt=E9Q9Q7 | |||
|association_with_transcript=44bp_to_ENSMUST00000111526_5end | |||
|description=CAGE_peak_6_at_Ablim1_5end | |||
|id=chr19:57193346..57193358,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,2.52e-07,6;CL:0000556,2.52e-07,6;CL:0002031,6.87e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!1.34e-09!29;UBERON:0002193!2.16e-08!48;UBERON:0003408!9.36e-08!24;UBERON:0006562!1.27e-07!24;UBERON:0001557!1.27e-07!24;UBERON:0001042!1.27e-07!24;UBERON:0008814!1.27e-07!24;UBERON:0009145!1.27e-07!24;UBERON:0002370!3.03e-07!23;UBERON:0000974!3.03e-07!23;UBERON:0004807!3.03e-07!23;UBERON:0005058!3.03e-07!23;UBERON:0003351!3.03e-07!23;UBERON:0009113!3.03e-07!23;UBERON:0003295!3.03e-07!23;UBERON:0009722!3.03e-07!23;UBERON:0005562!3.03e-07!23;UBERON:0007690!3.03e-07!23;UBERON:0001004!5.41e-07!42;UBERON:0002390!6.27e-07!45;UBERON:0003061!6.27e-07!45 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,9.82e-15,48;UBERON:0002405,9.82e-15,48;UBERON:0004177,1.70e-13,29;UBERON:0005057,1.70e-13,29;UBERON:0002390,2.46e-12,45;UBERON:0003061,2.46e-12,45;UBERON:0000077,6.18e-11,35;UBERON:0003408,9.02e-11,24;UBERON:0006562,1.42e-10,24;UBERON:0001557,1.42e-10,24;UBERON:0001042,1.42e-10,24;UBERON:0008814,1.42e-10,24;UBERON:0009145,1.42e-10,24;UBERON:0002370,5.14e-10,23;UBERON:0000974,5.14e-10,23;UBERON:0004807,5.14e-10,23;UBERON:0005058,5.14e-10,23;UBERON:0003351,5.14e-10,23;UBERON:0009113,5.14e-10,23;UBERON:0003295,5.14e-10,23;UBERON:0009722,5.14e-10,23;UBERON:0005562,5.14e-10,23;UBERON:0007690,5.14e-10,23;UBERON:0001004,6.99e-10,42;UBERON:0000065,3.08e-09,41;UBERON:0001041,3.78e-09,80;UBERON:0000072,1.12e-08,27;UBERON:0003081,5.29e-08,87;UBERON:0007811,4.38e-07,36;UBERON:0000153,9.91e-07,43 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0.16787927191189,0.233612640595526,3.35720640948098,5.91312633037,7.72412936862578,0.34243593645101,0.8774937489487,4.28001824828014,2.71003247498892,15.6561588053361,21.8673288781012,3.49780939064073,132.967302698497,123.265875811559,109.068140512094,1.36069264241712,1.19149141441062,1.04479915655574,12.9593862462659,7.57050627521661,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0.523523743973798,0,0,0.485510353031154,0.629484089877886,0.811015449756117,1.10128051297009,0,0.218025156380447,0,0,0.139986421625363,0,122.145737210032,3.62681071005672,7.39406358113421,0,0,0,0.202316460859598,0,0.633831403506179,0,0,0.449949858640699,0,0,0,0,0.103689612308478,0.135005938331691,0.210324961351382,0,1.10434270475807,0.367472397644862,0.0958454710182364,0,4.40463523997555,2.42605942361857,1.53606533256243,0.131886287730194,0.182975287204819,0,1.11673199600552,0.56276261003168,1.5279824777681,0.294628585473668,0.284743361598206,0.186399445825301,0.075726193333184,0,0.579728977403356,0,0,0,0,0,3.7919993435573,1.1930122580464,0.519572009205738,1.41335829804136,0.563373679106722,1.28326477414318,0,0,0,0.253359865475099,0.505524445014783,4.11061966988616,104.35196710981,0.445326417194474,0,0.304465478312141,0.230615497256059,0,1.05829836422134,0.125666591329675,0.494389935468748,2.4581890676385,7.07688441559899,1.29413479957927,9.05450225687614,13.5765070877862,1.86391761218122,0,0.628340120440365,1.27728527604296,0,0,0,1.04853447583376,1.37250180845588,0.251308704225729,0.695297280769106,0.511430914660661,1.45451631191692,0.486723789203273,0.407357455401265,11.8186622079588,0,1.26265113531884,0,0,0.360124259610698,0.753524089178575,0.204109497453984,0.2562274405697,0.468508622798644,1.03481348295606,0,0,0.175951124163949,0,1.94633074457919,1.39300866608867,1.23469281844766,0.59710280045548,0,0.257347907114715,0,0.414251545071004,0.234526059981096,0.180062061461015,0.23674473558521,0.393528463494808,0.154267112887378,0.232533944750408,0.268273401399619,0.350296027101508,0.658239399653922,0.492502392237286,1.13496333364198,0.877199924551994,0.219550115291051,1.20785776884335,0.630869845692382,0.720332286654991,1.32167513193519,0,0,0.232236671860439,0.38660238396628,0,0.22237804384487,0.190225626112559,1.42358718463353,0.164698954724011,0,0.994782360205754,0.974820435595601,0.898819408654221,1.08069024937347,0.597423819763102,0,0.685491075658373,1.1270773567308,0.814605311381257,0.387904974335251,1.05203729835478,0.505892296994058,0.442830443938806,0.784993639206874,0,0.296452627087149,0,0,0,1.01430060694251,1.20588579876208,1.2731292589071,2.30156909960649,2.7562988551756,3.0201755450689,5.75072826109418,0.372140947668503,0.624075346229121,0,0.717589654087649,0,5.91210208533135,0,0,0.339490171550376,0.469380496577004,0.167506257441816,0,0.585400943573396,1.41871629695572,2.43611158613652,2.87018583583477,5.40748938561935,6.56202931090403,1.73578870297814,0,0,0.983528546038072,4.13905119457099,2.56880943980467,1.17211686592203,0.163934945376675,0.757412781613119,0,0,0,0,0,0,0.404810701674894,0.584511715822624,0.790575555893047,0.642642632843614,1.13552068166615,0.890328018336276,1.30309567482861,0.989820737835213,2.65490276679926,0.242780636154981,0,0.565815239267694,0.295301892880773,0,0.516856586336442,0,0.712994756769443,1.26414703174326,2.10837217149998,0,0.340439605753788,0.36012218806262,0.388076051348264,0,0,0,0.164549020602121,0.304464949114599,0.469343416127421,0,0,1.81374878235628,0.968786560175433,1.99032652262914,1.90995750405018,2.62625439592098,0.874442509889552,0.556275906031529,23.0675689077101,0.206386867963223,3.1483069652851,10.7370020492674,36.2239703460717,29.5123843436414,0.509935289981566,0.839708713941948,2.07299960706636,0,0.474503990371703,0.406638934253697,0.756037385752609,0,0,1.21377911746339,1.32245529160537,1.83229159388821,0.648074866458964,5.59205381778233,0,0,0,0.194451188344048,0.129159823477731,0.337912250981556,0.234714477291508,0.13020438484395,0,0,0,3.16011120628178,7.29810775044591,9.34669710199928,4.80707045017842,2.8644271306797,1.39076948346885,2.28371354087941,2.95379054349154,2.22126189885925,1.295515713135,1.81487133246313,2.82627854145282,2.11666051608725,1.98690733708667,2.26730383615211,0,0,0,0.965947970160952,0.375364950902364,1.28206136987086,4.07299920250225,1.00314420807073,0,0,0,0.515559547031063,0,0,0.675022500231806,0.45032120322422,0,0,0.103787347584177,0,0.170733605754134,0.243106717068294,0.419226325255965,0.551530525350042,0.666740183404846,1.44224540067226,0.320919209591815,0,0.50695859978048,0.377252682772152,0.749132059759059,0.384150914429216,0.574354689556133,0,0.811190281613988,0.964546102318525,0.412085900803307,0.294397840268795,0.342869252385415,0.532427418478012,0.238436189947321,0.290692833264657,0.470546902076653,0.507687647350059,1.64635175585495,0.789209134313529,0.679020569229309,0,0.118635018124174,0.788035859004508,0.818462086339379,0.929621047115796,0.385813221962283,0.749431733813838,0.233931608445408,1.28922632428979,0.382576664137687,1.54413993383661,2.31867835620421 | |||
|short_description=p6@Ablim1 | |||
}} | |||
Revision as of 18:10, 13 September 2013
| Short description: | p6@Ablim1 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_6_at_Ablim1_5end |
| Coexpression cluster: | MCL_coexpression_mm9:18 |
| Association with transcript: | 44bp_to_ENSMUST00000111526_5end |
| EntrezGene: | Ablim1 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| megakaryocyte progenitor cell | 2.52e-07 | 6 |
| megakaryocyte | 2.52e-07 | 6 |
| hematopoietic lineage restricted progenitor cell | 6.87e-07 | 25 |
| Ontology term | p-value | n |
|---|---|---|
| hemolymphoid system | 9.82e-15 | 48 |
| immune system | 9.82e-15 | 48 |
| hemopoietic organ | 1.70e-13 | 29 |
| immune organ | 1.70e-13 | 29 |
| hematopoietic system | 2.46e-12 | 45 |
| blood island | 2.46e-12 | 45 |
| mixed endoderm/mesoderm-derived structure | 6.18e-11 | 35 |
| gland of gut | 9.02e-11 | 24 |
| pharynx | 1.42e-10 | 24 |
| upper respiratory tract | 1.42e-10 | 24 |
| chordate pharynx | 1.42e-10 | 24 |
| pharyngeal arch system | 1.42e-10 | 24 |
| pharyngeal region of foregut | 1.42e-10 | 24 |
| thymus | 5.14e-10 | 23 |
| neck | 5.14e-10 | 23 |
| respiratory system epithelium | 5.14e-10 | 23 |
| hemolymphoid system gland | 5.14e-10 | 23 |
| pharyngeal epithelium | 5.14e-10 | 23 |
| thymic region | 5.14e-10 | 23 |
| pharyngeal gland | 5.14e-10 | 23 |
| entire pharyngeal arch endoderm | 5.14e-10 | 23 |
| thymus primordium | 5.14e-10 | 23 |
| early pharyngeal endoderm | 5.14e-10 | 23 |
| respiratory system | 6.99e-10 | 42 |
| respiratory tract | 3.08e-09 | 41 |
| foregut | 3.78e-09 | 80 |
| segment of respiratory tract | 1.12e-08 | 27 |
| lateral plate mesoderm | 5.29e-08 | 87 |
| craniocervical region | 4.38e-07 | 36 |
| anterior region of body | 9.91e-07 | 43 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
