FFCP PHASE1:Hg19::chr5:173472676..173472732,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=51617|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=|TSSclassifier=S|UniProt=G3XAM5,E5RHS6,Q9Y328|association_with_transcript=0bp_to_ENST00000517587,ENST00000517902,ENST00000519867,NM_015980,uc003mcx.2_5end|coexpression_cluster_id=C10|description=CAGE_peak_1_at_HMP19_5end|id=chr5:173472676..173472732,+|ontology_enrichment_celltype=CL:0002319!3.63e-07!25|ontology_enrichment_celltype_v019=CL:0002319;8.39e-07;25|ontology_enrichment_celltype_v019_2=CL:0002319,8.53e-07,25|ontology_enrichment_development_v019=UBERON:0006601;3.27e-22;82!UBERON:0006238;2.03e-07;10|ontology_enrichment_disease=DOID:171!1.69e-07!10|ontology_enrichment_disease_v019=DOID:169;6.97e-08;6|ontology_enrichment_disease_v019_2=DOID:169,7.02e-08,6|ontology_enrichment_uberon=UBERON:0001017!8.74e-70!82;UBERON:0000073!1.04e-69!94;UBERON:0001016!1.04e-69!94;UBERON:0001049!1.17e-67!57;UBERON:0005068!1.17e-67!57;UBERON:0006241!1.17e-67!57;UBERON:0007135!1.17e-67!57;UBERON:0005743!1.18e-67!86;UBERON:0000955!1.49e-60!69;UBERON:0006238!1.49e-60!69;UBERON:0002616!5.51e-57!59;UBERON:0002346!2.60e-55!90;UBERON:0007023!9.56e-55!115;UBERON:0002780!5.87e-54!41;UBERON:0001890!5.87e-54!41;UBERON:0006240!5.87e-54!41;UBERON:0003075!1.81e-53!86;UBERON:0007284!1.81e-53!86;UBERON:0003080!2.53e-52!42;UBERON:0001893!7.70e-46!34;UBERON:0002020!9.13e-46!34;UBERON:0003528!9.13e-46!34;UBERON:0002791!1.89e-44!33;UBERON:0001869!1.38e-43!32;UBERON:0000924!3.28e-41!173;UBERON:0006601!3.28e-41!173;UBERON:0003056!7.21e-40!61;UBERON:0004121!2.49e-39!169;UBERON:0000153!5.12e-35!129;UBERON:0007811!5.12e-35!129;UBERON:0000033!2.33e-34!123;UBERON:0000956!9.46e-34!25;UBERON:0000203!9.46e-34!25;UBERON:0002619!7.42e-32!22;UBERON:0001950!3.33e-29!20;UBERON:0000025!8.99e-17!194;UBERON:0003076!8.16e-16!15;UBERON:0003057!8.16e-16!15;UBERON:0004111!6.79e-14!241;UBERON:0002420!1.23e-13!9;UBERON:0007245!1.23e-13!9;UBERON:0010009!1.23e-13!9;UBERON:0010011!1.23e-13!9;UBERON:0000454!1.23e-13!9;UBERON:0004732!1.67e-13!13;UBERON:0002308!2.90e-13!9;UBERON:0000125!2.90e-13!9;UBERON:0000064!3.40e-13!219;UBERON:0004733!1.73e-12!12;UBERON:0002028!1.73e-12!12;UBERON:0007277!1.73e-12!12;UBERON:0001871!6.21e-12!7;UBERON:0000477!1.32e-11!286;UBERON:0009663!6.63e-11!7;UBERON:0000922!4.38e-10!612;UBERON:0000483!9.15e-10!309;UBERON:0000481!1.05e-09!347;UBERON:0000062!1.14e-09!511;UBERON:0000119!1.82e-09!312;UBERON:0000475!2.08e-09!365;UBERON:0001894!2.42e-09!7;UBERON:0006222!2.42e-09!7;UBERON:0000200!2.60e-09!6;UBERON:0002680!3.75e-09!9;UBERON:0001895!3.75e-09!9;UBERON:0010092!3.75e-09!9;UBERON:0002050!9.57e-09!605;UBERON:0005423!9.57e-09!605;UBERON:0000349!2.00e-08!5;UBERON:0000923!2.25e-08!604;UBERON:0005291!2.25e-08!604;UBERON:0006598!2.25e-08!604;UBERON:0002532!2.25e-08!604;UBERON:0002298!2.70e-08!8;UBERON:0002021!3.09e-08!5;UBERON:0001872!3.73e-08!5;UBERON:0000468!5.70e-08!659;UBERON:0000369!1.80e-07!4;UBERON:0002435!1.80e-07!4;UBERON:0000204!1.80e-07!4;UBERON:0010082!1.80e-07!4|ontology_enrichment_uberon_v019=UBERON:0002780;3.55e-46;41!UBERON:0001890;3.55e-46;41!UBERON:0001869;4.21e-45;32!UBERON:0003528;4.54e-45;34!UBERON:0002020;4.54e-45;34!UBERON:0001893;4.93e-45;34!UBERON:0002791;7.38e-45;32!UBERON:0000073;7.80e-45;53!UBERON:0002616;7.80e-45;53!UBERON:0002619;6.58e-43;22!UBERON:0001950;2.78e-39;20!UBERON:0000956;4.67e-37;25!UBERON:0000203;4.67e-37;25!UBERON:0001016;8.19e-35;83!UBERON:0001017;1.42e-34;75!UBERON:0000955;2.96e-34;68!UBERON:0002420;5.07e-18;9!UBERON:0007245;5.07e-18;9!UBERON:0010009;5.07e-18;9!UBERON:0010011;5.07e-18;9!UBERON:0000454;5.07e-18;9!UBERON:0004732;5.25e-18;13!UBERON:0000125;1.63e-17;9!UBERON:0002308;1.63e-17;9!UBERON:0004733;1.29e-16;12!UBERON:0002028;1.29e-16;12!UBERON:0011216;2.05e-14;132!UBERON:0007023;2.05e-14;114!UBERON:0009663;2.69e-14;7!UBERON:0001871;4.55e-14;6!UBERON:0001894;3.77e-12;7!UBERON:0000200;4.14e-12;6!UBERON:0002680;4.57e-12;9!UBERON:0001895;4.57e-12;9!UBERON:0002298;3.18e-11;6!UBERON:0000349;6.49e-11;5!UBERON:0002021;1.17e-10;5!UBERON:0001872;1.52e-10;5!UBERON:0000369;1.27e-09;4!UBERON:0002435;1.27e-09;4!UBERON:0000204;1.27e-09;4!UBERON:0002784;1.14e-07;4!UBERON:0005383;1.18e-07;3!UBERON:0005382;1.18e-07;3!UBERON:0010314;1.43e-07;132!UBERON:0002037;2.74e-07;6!UBERON:0003296;5.49e-07;4!UBERON:0010133;5.49e-07;4!UBERON:0001870;6.10e-07;3!UBERON:0004121;9.88e-07;165|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.74e-94,89;UBERON:0001017,3.22e-91,81;UBERON:0001049,1.44e-85,56;UBERON:0005068,1.44e-85,56;UBERON:0006241,1.44e-85,56;UBERON:0007135,1.44e-85,56;UBERON:0000073,1.38e-80,53;UBERON:0002616,1.38e-80,53;UBERON:0000955,4.35e-78,68;UBERON:0006238,4.35e-78,68;UBERON:0003075,1.07e-64,82;UBERON:0007284,1.07e-64,82;UBERON:0002780,2.08e-64,41;UBERON:0001890,2.08e-64,41;UBERON:0003080,2.08e-64,41;UBERON:0006240,2.08e-64,41;UBERON:0002346,4.20e-63,86;UBERON:0001893,2.49e-53,34;UBERON:0003528,3.08e-53,34;UBERON:0002020,3.08e-53,34;UBERON:0001869,3.00e-50,32;UBERON:0002791,7.07e-50,32;UBERON:00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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=51617 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt=G3XAM5,E5RHS6,Q9Y328 | |||
|association_with_transcript=0bp_to_ENST00000517587,ENST00000517902,ENST00000519867,NM_015980,uc003mcx.2_5end | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_1_at_HMP19_5end | |||
|id=chr5:173472676..173472732,+ | |||
|ontology_enrichment_celltype=CL:0002319!3.63e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0002319;8.39e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,8.53e-07,25 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.27e-22;82!UBERON:0006238;2.03e-07;10 | |||
|ontology_enrichment_disease=DOID:171!1.69e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:169;6.97e-08;6 | |||
|ontology_enrichment_disease_v019_2=DOID:169,7.02e-08,6 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60057375499824,0,1.56727360739044,0.286235987131057,0.136874425072884,0.251085279189606,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,0,0.0945348171640679,0,0.087834785693126,42.6336890745055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,1.04574548582567,3.52447587052259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.54473944008842,0,0,0,0,0,0,0,0,0,0,1.62302566965108,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,6.84289784090821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.06551398755941,205.620969095042,166.257094747204,407.232041027802,174.157279201314,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,4.1389228517002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593929361665277,0,485.144052109953,235.761941904019,0,0,0,0.597743964753209,6.07824614168525,1.51159648712566,0,0,0,0,0,0,1.1837208676432,0,0,245.24118476209,220.97360982153,624.791187743738,0,0,0,0,0,0,0,11.6641845353302,47.9204986015887,599.646918195969,624.207166325112,103.755580695617,121.968923704141,140.385119002935,250.538123549837,0,0,0.230850775511391,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.96683351754953,4.15750553165694,20.1639947828096,0,0,0,48.3940134801261,0,428.469671231645,0,0,0,0,13.308978765353,815.989982506887,5.68679216656392,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0.171986032471617,0,0,0,1.74580229679155,0,44.7441866745454,0,0,293.508850051454,0,0,0.85381197895741,0,0,0,7.03539491234055,0,0,0,3.12579673969312,2.30126261887133,0,0,236.565593751657,47.6430718544136,0,0,0,1.95497680890578,0.229160424011684,0,0.199679000498991,0,0,0.940568614814168,0,0,0,0,0.0674035438541849,0,0,346.720144756856,150.777170565514,0,0,0,0,0,426.644136409307,0,0,0.472091293214983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,105.88274126011,126.017669460784,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,222.403113171713,215.742436346671,121.935966508131,39.5652345026149,50.4727184492678,110.096922415073,13.9732121285593,0,0,0,0,0,11.593682288866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,116.413603239757,0,0,0,0,0,0,0,0,0.344429959321631,0,0,0.139879507719444,0,58.5756220570725,209.395783732356,0,193.847107790825,0.509197589862076,3.18862380152524,0.495743057036009,6.70373901567893,0,0,325.832294552186,0,0,562.519553394793,185.622514986516,64.6517129181463,259.267084400314,701.515530585041,273.586090748446,241.729041510881,11.4215536207324,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,240.433801241485,173.399337892274,116.157979633665,227.218847924768,524.548841848473,0,0,0,0,8.0355275381743,11.0973628332212,5.46269043812968,4.55324382702595,0,0,0.171488009437418,198.947408423186,250.594267274455,0,0,1.0989032999072,819.514917001866,0,39.2658249819083,0,0,14.152355746978,5.05643557544725,0,0,0,0,0,0,0.860454717640555,0,0,1.69354820076372,0,0,0,0,0,0,0,0,0,0,34.8569800558537,52.3240538674398,0.118920090777569,0,240.220029088763,189.760294363309,4.01305622161312,10.7094184646939,201.766120139093,0,62.2186084348292,48.8808083116214,22.2784800245315,104.818620440683,0,0,0.322289439867886,0,0,0,0,5.11235471772562,0.458729283404541,15.3373353972053,0,360.286906521657,594.309640243594,18.515939418039,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0.535928260312357,153.396346299874,110.363006584642,0.426467963801962,0.23806443146374,0,0.0620747142958579,0,0.0636471582781649,0.404234377916439,0.435433495793923,0,0,0.430333232356058,0.665320713092027,0,0,0,0,0,0.611207220914332,3.25516942652591,0.665756774185513,1.40891655513718,0 | |||
|short_description=p1@HMP19 | |||
}} |
Revision as of 14:57, 13 September 2013
Short description: | p1@HMP19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_HMP19_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 0bp_to_ENST00000517587, ENST00000517902, ENST00000519867, NM_015980, uc003mcx.2_5end |
EntrezGene: | HMP19 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 8.53e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 7.02e-08 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.