FFCP PHASE1:Hg19::chr4:155533798..155533816,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2266|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=3694|TSSclassifier=N|UniProt=P02679|association_with_transcript=0bp_to_ENST00000336098,ENST00000464532,ENST00000465336,ENST00000492082_5end|coexpression_cluster_id=C5|description=CAGE_peak_1_at_FGG_5end|id=chr4:155533798..155533816,-|ontology_enrichment_celltype=CL:0000181!1.06e-13!12;CL:0000417!1.06e-13!12;CL:0000668!1.06e-13!12;CL:0000414!1.06e-13!12;CL:0000412!1.06e-13!12;CL:0000182!1.06e-13!12|ontology_enrichment_celltype_v019=CL:0000182;8.15e-18;12!CL:0002564;2.12e-10;3!CL:0002602;3.04e-07;2|ontology_enrichment_celltype_v019_2=CL:0000182,8.15e-18,12;CL:0002564,2.26e-10,3;CL:0002602,2.89e-07,2|ontology_enrichment_development_v019=UBERON:0001041;2.25e-16;30!UBERON:0003104;1.55e-15;31!UBERON:0004161;5.94e-15;11!UBERON:0009497;1.79e-12;13|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:114;2.71e-07;2|ontology_enrichment_disease_v019_2=DOID:114,2.63e-07,2|ontology_enrichment_uberon=UBERON:0005057!8.86e-20!26;UBERON:0002107!2.79e-18!19;UBERON:0006925!2.79e-18!19;UBERON:0008836!2.79e-18!19;UBERON:0009854!3.34e-18!23;UBERON:0008835!5.14e-17!22;UBERON:0003894!5.14e-17!22;UBERON:0002368!4.43e-16!35;UBERON:0009856!1.78e-15!26;UBERON:0007499!2.28e-14!25;UBERON:0009497!2.28e-14!25;UBERON:0000015!2.28e-14!25;UBERON:0002423!2.28e-14!25;UBERON:0006235!2.28e-14!25;UBERON:0004161!2.28e-14!25;UBERON:0007023!5.51e-13!115;UBERON:0004921!9.53e-13!129;UBERON:0004185!9.53e-13!129;UBERON:0003929!1.07e-12!54;UBERON:0000949!1.95e-12!45;UBERON:0005911!5.08e-12!82;UBERON:0005177!6.35e-12!107;UBERON:0005172!1.73e-11!55;UBERON:0005173!1.73e-11!55;UBERON:0000077!1.96e-10!130;UBERON:0000481!3.45e-10!347;UBERON:0000062!4.16e-10!511;UBERON:0001007!6.86e-10!155;UBERON:0001555!6.86e-10!155;UBERON:0007026!6.86e-10!155;UBERON:0002530!1.13e-09!59;UBERON:0002417!1.13e-09!61;UBERON:0000916!1.13e-09!61;UBERON:0002365!2.00e-09!31;UBERON:0002330!2.00e-09!31;UBERON:0004119!2.55e-09!169;UBERON:0000925!2.55e-09!169;UBERON:0006595!2.55e-09!169;UBERON:0001041!2.67e-09!98;UBERON:0000468!6.21e-08!659;UBERON:0000119!8.52e-08!312;UBERON:0009569!9.59e-08!113;UBERON:0000922!1.08e-07!612;UBERON:0001048!1.31e-07!168;UBERON:0000483!1.32e-07!309;UBERON:0000466!1.42e-07!126;UBERON:0003104!5.72e-07!238;UBERON:0009142!5.72e-07!238;UBERON:0000477!7.03e-07!286|ontology_enrichment_uberon_v019=UBERON:0002107;4.90e-24;19!UBERON:0006925;4.90e-24;19!UBERON:0002423;1.45e-17;25!UBERON:0011135;5.95e-16;5!UBERON:0002216;5.95e-16;5!UBERON:0011134;5.95e-16;5!UBERON:0002209;5.95e-16;5!UBERON:0002213;5.95e-16;5!UBERON:0007844;5.95e-16;5!UBERON:0011138;5.95e-16;5!UBERON:0001130;5.95e-16;5!UBERON:0001066;5.95e-16;5!UBERON:0001468;5.95e-16;5!UBERON:0002368;1.75e-15;33!UBERON:0002365;1.93e-13;31!UBERON:0002330;1.93e-13;31!UBERON:0000949;1.04e-10;43!UBERON:0002242;2.12e-10;3!UBERON:0004905;7.43e-10;8!UBERON:0000982;7.43e-10;8!UBERON:0004770;7.43e-10;8!UBERON:0005172;2.96e-09;52!UBERON:0005173;2.96e-09;52!UBERON:0006444;3.04e-07;2!UBERON:0001995;3.04e-07;2!UBERON:0004715;3.04e-07;2!UBERON:0001007;6.92e-07;81!UBERON:0000922;9.75e-07;49|ontology_enrichment_uberon_v019_2=UBERON:0002107,4.80e-24,19;UBERON:0006925,4.80e-24,19;UBERON:0008836,4.80e-24,19;UBERON:0008835,2.30e-20,22;UBERON:0003894,2.30e-20,22;UBERON:0009854,2.36e-19,23;UBERON:0007499,1.43e-17,25;UBERON:0009497,1.43e-17,25;UBERON:0000015,1.43e-17,25;UBERON:0002423,1.43e-17,25;UBERON:0006235,1.43e-17,25;UBERON:0004161,1.43e-17,25;UBERON:0009856,8.75e-17,26;UBERON:0005911,4.94e-16,82;UBERON:0002368,5.62e-16,35;UBERON:0011135,6.04e-16,5;UBERON:0002216,6.04e-16,5;UBERON:0011134,6.04e-16,5;UBERON:0002209,6.04e-16,5;UBERON:0002213,6.04e-16,5;UBERON:0005856,6.04e-16,5;UBERON:0005866,6.04e-16,5;UBERON:0005863,6.04e-16,5;UBERON:0007844,6.04e-16,5;UBERON:0011138,6.04e-16,5;UBERON:0001130,6.04e-16,5;UBERON:0001066,6.04e-16,5;UBERON:0001468,6.04e-16,5;UBERON:0004921,7.60e-15,118;UBERON:0003929,2.99e-14,54;UBERON:0005172,3.14e-14,54;UBERON:0005173,3.14e-14,54;UBERON:0002365,1.29e-13,31;UBERON:0002330,1.29e-13,31;UBERON:0000949,1.72e-13,45;UBERON:0011216,3.07e-13,223;UBERON:0005177,3.76e-13,101;UBERON:0001041,4.65e-13,87;UBERON:0002417,2.23e-12,60;UBERON:0000916,2.23e-12,60;UBERON:0001007,8.52e-12,145;UBERON:0001555,8.52e-12,145;UBERON:0007026,8.52e-12,145;UBERON:0004119,5.23e-11,160;UBERON:0000925,5.23e-11,160;UBERON:0006595,5.23e-11,160;UBERON:0002242,2.26e-10,3;UBERON:0003068,2.26e-10,3;UBERON:0002328,2.26e-10,3;UBERON:0004880,2.26e-10,3;UBERON:0009569,3.63e-10,112;UBERON:0004905,7.50e-10,8;UBERON:0000982,7.50e-10,8;UBERON:0004770,7.50e-10,8;UBERON:0002530,1.61e-09,59;UBERON:0003104,3.96e-09,160;UBERON:0009142,3.96e-09,160;UBERON:0001048,1.78e-07,160;UBERON:0006444,2.89e-07,2;UBERON:0001995,2.89e-07,2;UBERON:0004715,2.89e-07,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,6.68338305984252,4.63956326019082,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=2266 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3694 | |||
|TSSclassifier=N | |||
|UniProt=P02679 | |||
|association_with_transcript=0bp_to_ENST00000336098,ENST00000464532,ENST00000465336,ENST00000492082_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_1_at_FGG_5end | |||
|id=chr4:155533798..155533816,- | |||
|ontology_enrichment_celltype=CL:0000181!1.06e-13!12;CL:0000417!1.06e-13!12;CL:0000668!1.06e-13!12;CL:0000414!1.06e-13!12;CL:0000412!1.06e-13!12;CL:0000182!1.06e-13!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;8.15e-18;12!CL:0002564;2.12e-10;3!CL:0002602;3.04e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,8.15e-18,12;CL:0002564,2.26e-10,3;CL:0002602,2.89e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0001041;2.25e-16;30!UBERON:0003104;1.55e-15;31!UBERON:0004161;5.94e-15;11!UBERON:0009497;1.79e-12;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;2.71e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,2.63e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0005057!8.86e-20!26;UBERON:0002107!2.79e-18!19;UBERON:0006925!2.79e-18!19;UBERON:0008836!2.79e-18!19;UBERON:0009854!3.34e-18!23;UBERON:0008835!5.14e-17!22;UBERON:0003894!5.14e-17!22;UBERON:0002368!4.43e-16!35;UBERON:0009856!1.78e-15!26;UBERON:0007499!2.28e-14!25;UBERON:0009497!2.28e-14!25;UBERON:0000015!2.28e-14!25;UBERON:0002423!2.28e-14!25;UBERON:0006235!2.28e-14!25;UBERON:0004161!2.28e-14!25;UBERON:0007023!5.51e-13!115;UBERON:0004921!9.53e-13!129;UBERON:0004185!9.53e-13!129;UBERON:0003929!1.07e-12!54;UBERON:0000949!1.95e-12!45;UBERON:0005911!5.08e-12!82;UBERON:0005177!6.35e-12!107;UBERON:0005172!1.73e-11!55;UBERON:0005173!1.73e-11!55;UBERON:0000077!1.96e-10!130;UBERON:0000481!3.45e-10!347;UBERON:0000062!4.16e-10!511;UBERON:0001007!6.86e-10!155;UBERON:0001555!6.86e-10!155;UBERON:0007026!6.86e-10!155;UBERON:0002530!1.13e-09!59;UBERON:0002417!1.13e-09!61;UBERON:0000916!1.13e-09!61;UBERON:0002365!2.00e-09!31;UBERON:0002330!2.00e-09!31;UBERON:0004119!2.55e-09!169;UBERON:0000925!2.55e-09!169;UBERON:0006595!2.55e-09!169;UBERON:0001041!2.67e-09!98;UBERON:0000468!6.21e-08!659;UBERON:0000119!8.52e-08!312;UBERON:0009569!9.59e-08!113;UBERON:0000922!1.08e-07!612;UBERON:0001048!1.31e-07!168;UBERON:0000483!1.32e-07!309;UBERON:0000466!1.42e-07!126;UBERON:0003104!5.72e-07!238;UBERON:0009142!5.72e-07!238;UBERON:0000477!7.03e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;4.90e-24;19!UBERON:0006925;4.90e-24;19!UBERON:0002423;1.45e-17;25!UBERON:0011135;5.95e-16;5!UBERON:0002216;5.95e-16;5!UBERON:0011134;5.95e-16;5!UBERON:0002209;5.95e-16;5!UBERON:0002213;5.95e-16;5!UBERON:0007844;5.95e-16;5!UBERON:0011138;5.95e-16;5!UBERON:0001130;5.95e-16;5!UBERON:0001066;5.95e-16;5!UBERON:0001468;5.95e-16;5!UBERON:0002368;1.75e-15;33!UBERON:0002365;1.93e-13;31!UBERON:0002330;1.93e-13;31!UBERON:0000949;1.04e-10;43!UBERON:0002242;2.12e-10;3!UBERON:0004905;7.43e-10;8!UBERON:0000982;7.43e-10;8!UBERON:0004770;7.43e-10;8!UBERON:0005172;2.96e-09;52!UBERON:0005173;2.96e-09;52!UBERON:0006444;3.04e-07;2!UBERON:0001995;3.04e-07;2!UBERON:0004715;3.04e-07;2!UBERON:0001007;6.92e-07;81!UBERON:0000922;9.75e-07;49 | |||
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|short_description=p1@FGG | |||
}} |
Revision as of 02:56, 13 September 2013
Short description: | p1@FGG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_FGG_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000336098, ENST00000464532, ENST00000465336, ENST00000492082_5end |
EntrezGene: | FGG |
HGNC: | 3694 |
UniProt: | P02679 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 8.15e-18 | 12 |
nucleus pulposus cell of intervertebral disc | 2.26e-10 | 3 |
annulus pulposus cell | 2.89e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
heart disease | 2.63e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.