FFCP PHASE1:Mm9::chr14:54768936..54768955,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=4|UniProt=Q5R1A2|association_with_transcript=13bp_to_uc007ttz.1_5end|description=CAGE_peak_1_at_uc007ttz.1_5end|id=chr14:54768936..54768955,-|ontology_enrichment_celltype=CL:0000893!3.78e-11!6;CL:0002489!3.78e-11!6;CL:0000898!3.78e-11!6;CL:0000809!3.78e-11!6;CL:0000810!3.78e-11!6;CL:0000895!3.78e-11!6;CL:0000808!3.78e-11!6;CL:0000894!3.78e-11!6;CL:0000806!3.78e-11!6;CL:0000807!3.78e-11!6;CL:0000805!3.78e-11!6;CL:0002425!3.78e-11!6;CL:0002436!3.78e-11!6;CL:0002427!3.78e-11!6;CL:0002428!3.78e-11!6;CL:0002429!3.78e-11!6;CL:0002433!3.78e-11!6;CL:0002431!3.78e-11!6;CL:0002432!3.78e-11!6;CL:0000624!8.08e-11!8;CL:0000084!6.75e-10!11;CL:0000827!6.75e-10!11;CL:0000791!1.68e-09!9;CL:0000789!1.68e-09!9;CL:0002420!1.68e-09!9;CL:0002419!1.68e-09!9;CL:0000790!1.68e-09!9;CL:0000838!5.85e-09!12;CL:0000542!3.63e-08!13;CL:0000051!3.63e-08!13|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!3.35e-28!29;UBERON:0002370!4.07e-27!23;UBERON:0000974!4.07e-27!23;UBERON:0004807!4.07e-27!23;UBERON:0005058!4.07e-27!23;UBERON:0003351!4.07e-27!23;UBERON:0009113!4.07e-27!23;UBERON:0003295!4.07e-27!23;UBERON:0009722!4.07e-27!23;UBERON:0005562!4.07e-27!23;UBERON:0007690!4.07e-27!23;UBERON:0006562!8.81e-26!24;UBERON:0003408!8.81e-26!24;UBERON:0001557!8.81e-26!24;UBERON:0001042!8.81e-26!24;UBERON:0008814!8.81e-26!24;UBERON:0009145!8.81e-26!24;UBERON:0000072!2.27e-22!27;UBERON:0000065!2.55e-20!41;UBERON:0002193!5.45e-20!48;UBERON:0001004!1.07e-19!42;UBERON:0000063!3.03e-18!35;UBERON:0002390!8.21e-18!45;UBERON:0003061!8.21e-18!45;UBERON:0005057!3.30e-15!51;UBERON:0002405!4.91e-13!70;UBERON:0005911!6.38e-11!69;UBERON:0003929!8.71e-10!55;UBERON:0001007!1.87e-09!128;UBERON:0001555!1.87e-09!128;UBERON:0007026!1.87e-09!128;UBERON:0001041!2.35e-09!92;UBERON:0004119!3.45e-09!130;UBERON:0000925!3.45e-09!130;UBERON:0006595!3.45e-09!130;UBERON:0000064!4.10e-09!99;UBERON:0004921!7.15e-09!126;UBERON:0004185!7.15e-09!126;UBERON:0002368!1.42e-08!60;UBERON:0000077!1.51e-08!97;UBERON:0003081!4.74e-08!88;UBERON:0002530!1.47e-07!65;UBERON:0000490!2.25e-07!66|ontology_enrichment_uberon_v019_2=UBERON:0002370,4.32e-36,23;UBERON:0000974,4.32e-36,23;UBERON:0004807,4.32e-36,23;UBERON:0005058,4.32e-36,23;UBERON:0003351,4.32e-36,23;UBERON:0009113,4.32e-36,23;UBERON:0003295,4.32e-36,23;UBERON:0009722,4.32e-36,23;UBERON:0005562,4.32e-36,23;UBERON:0007690,4.32e-36,23;UBERON:0006562,1.55e-34,24;UBERON:0003408,1.55e-34,24;UBERON:0001557,1.55e-34,24;UBERON:0001042,1.55e-34,24;UBERON:0008814,1.55e-34,24;UBERON:0009145,1.55e-34,24;UBERON:0000072,1.48e-30,27;UBERON:0004177,2.32e-28,29;UBERON:0005057,2.32e-28,29;UBERON:0000077,2.85e-23,35;UBERON:0007811,1.38e-22,36;UBERON:0000065,1.15e-19,41;UBERON:0002193,1.62e-19,48;UBERON:0002405,1.62e-19,48;UBERON:0001004,3.64e-19,42;UBERON:0000153,1.09e-18,43;UBERON:0002390,8.55e-18,45;UBERON:0003061,8.55e-18,45;UBERON:0003929,2.68e-14,55;UBERON:0002368,5.53e-13,60;UBERON:0002530,7.18e-12,65;UBERON:0000490,1.15e-11,66;UBERON:0005911,4.29e-11,69;UBERON:0000949,1.44e-10,72;UBERON:0001041,2.34e-09,80;UBERON:0004921,1.32e-08,114;UBERON:0003081,1.78e-08,87;UBERON:0001007,1.99e-08,116;UBERON:0001555,1.99e-08,116;UBERON:0007026,1.99e-08,116;UBERON:0004119,2.97e-08,118;UBERON:0000925,2.97e-08,118;UBERON:0006595,2.97e-08,118;UBERON:0000029,7.23e-07,1;UBERON:0001097,7.23e-07,1;UBERON:0003968,7.23e-07,1;UBERON:0001467,7.23e-07,1|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0.140788722151667,0.234064526321993,0.171217968225505,0.239316476986009,0.171200729931206,0.524522414513984,0,0,0,0.157731082679119,0,0,0.255129870453209,0.198581902401771,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,1.8125651855302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02182822083437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,1.98251269790279,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0.398282546508734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0.195133647857799,0,0,0,0.327726629431476,0.345369963731791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0.0603129249281559,0,0,0.291480836629851,0,0,0,0.185194527369712,0.188368457004691,0.27338845544205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,3.16011120628178,0,0,2.7283372825337,2.68540043501222,4.37098980518783,3.36547258655913,2.36303243479324,4.03865799792591,3.96275394605999,2.82313318383153,2.53390489923356,4.81059208201647,4.79195298944433,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0|short_description=p1@uc007ttz.1}} | ||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=4 | |||
|UniProt=Q5R1A2 | |||
|association_with_transcript=13bp_to_uc007ttz.1_5end | |||
|description=CAGE_peak_1_at_uc007ttz.1_5end | |||
|id=chr14:54768936..54768955,- | |||
|ontology_enrichment_celltype=CL:0000893!3.78e-11!6;CL:0002489!3.78e-11!6;CL:0000898!3.78e-11!6;CL:0000809!3.78e-11!6;CL:0000810!3.78e-11!6;CL:0000895!3.78e-11!6;CL:0000808!3.78e-11!6;CL:0000894!3.78e-11!6;CL:0000806!3.78e-11!6;CL:0000807!3.78e-11!6;CL:0000805!3.78e-11!6;CL:0002425!3.78e-11!6;CL:0002436!3.78e-11!6;CL:0002427!3.78e-11!6;CL:0002428!3.78e-11!6;CL:0002429!3.78e-11!6;CL:0002433!3.78e-11!6;CL:0002431!3.78e-11!6;CL:0002432!3.78e-11!6;CL:0000624!8.08e-11!8;CL:0000084!6.75e-10!11;CL:0000827!6.75e-10!11;CL:0000791!1.68e-09!9;CL:0000789!1.68e-09!9;CL:0002420!1.68e-09!9;CL:0002419!1.68e-09!9;CL:0000790!1.68e-09!9;CL:0000838!5.85e-09!12;CL:0000542!3.63e-08!13;CL:0000051!3.63e-08!13 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!3.35e-28!29;UBERON:0002370!4.07e-27!23;UBERON:0000974!4.07e-27!23;UBERON:0004807!4.07e-27!23;UBERON:0005058!4.07e-27!23;UBERON:0003351!4.07e-27!23;UBERON:0009113!4.07e-27!23;UBERON:0003295!4.07e-27!23;UBERON:0009722!4.07e-27!23;UBERON:0005562!4.07e-27!23;UBERON:0007690!4.07e-27!23;UBERON:0006562!8.81e-26!24;UBERON:0003408!8.81e-26!24;UBERON:0001557!8.81e-26!24;UBERON:0001042!8.81e-26!24;UBERON:0008814!8.81e-26!24;UBERON:0009145!8.81e-26!24;UBERON:0000072!2.27e-22!27;UBERON:0000065!2.55e-20!41;UBERON:0002193!5.45e-20!48;UBERON:0001004!1.07e-19!42;UBERON:0000063!3.03e-18!35;UBERON:0002390!8.21e-18!45;UBERON:0003061!8.21e-18!45;UBERON:0005057!3.30e-15!51;UBERON:0002405!4.91e-13!70;UBERON:0005911!6.38e-11!69;UBERON:0003929!8.71e-10!55;UBERON:0001007!1.87e-09!128;UBERON:0001555!1.87e-09!128;UBERON:0007026!1.87e-09!128;UBERON:0001041!2.35e-09!92;UBERON:0004119!3.45e-09!130;UBERON:0000925!3.45e-09!130;UBERON:0006595!3.45e-09!130;UBERON:0000064!4.10e-09!99;UBERON:0004921!7.15e-09!126;UBERON:0004185!7.15e-09!126;UBERON:0002368!1.42e-08!60;UBERON:0000077!1.51e-08!97;UBERON:0003081!4.74e-08!88;UBERON:0002530!1.47e-07!65;UBERON:0000490!2.25e-07!66 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,4.32e-36,23;UBERON:0000974,4.32e-36,23;UBERON:0004807,4.32e-36,23;UBERON:0005058,4.32e-36,23;UBERON:0003351,4.32e-36,23;UBERON:0009113,4.32e-36,23;UBERON:0003295,4.32e-36,23;UBERON:0009722,4.32e-36,23;UBERON:0005562,4.32e-36,23;UBERON:0007690,4.32e-36,23;UBERON:0006562,1.55e-34,24;UBERON:0003408,1.55e-34,24;UBERON:0001557,1.55e-34,24;UBERON:0001042,1.55e-34,24;UBERON:0008814,1.55e-34,24;UBERON:0009145,1.55e-34,24;UBERON:0000072,1.48e-30,27;UBERON:0004177,2.32e-28,29;UBERON:0005057,2.32e-28,29;UBERON:0000077,2.85e-23,35;UBERON:0007811,1.38e-22,36;UBERON:0000065,1.15e-19,41;UBERON:0002193,1.62e-19,48;UBERON:0002405,1.62e-19,48;UBERON:0001004,3.64e-19,42;UBERON:0000153,1.09e-18,43;UBERON:0002390,8.55e-18,45;UBERON:0003061,8.55e-18,45;UBERON:0003929,2.68e-14,55;UBERON:0002368,5.53e-13,60;UBERON:0002530,7.18e-12,65;UBERON:0000490,1.15e-11,66;UBERON:0005911,4.29e-11,69;UBERON:0000949,1.44e-10,72;UBERON:0001041,2.34e-09,80;UBERON:0004921,1.32e-08,114;UBERON:0003081,1.78e-08,87;UBERON:0001007,1.99e-08,116;UBERON:0001555,1.99e-08,116;UBERON:0007026,1.99e-08,116;UBERON:0004119,2.97e-08,118;UBERON:0000925,2.97e-08,118;UBERON:0006595,2.97e-08,118;UBERON:0000029,7.23e-07,1;UBERON:0001097,7.23e-07,1;UBERON:0003968,7.23e-07,1;UBERON:0001467,7.23e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0.140788722151667,0.234064526321993,0.171217968225505,0.239316476986009,0.171200729931206,0.524522414513984,0,0,0,0.157731082679119,0,0,0.255129870453209,0.198581902401771,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,1.8125651855302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02182822083437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,1.98251269790279,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0.398282546508734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0.195133647857799,0,0,0,0.327726629431476,0.345369963731791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0.0603129249281559,0,0,0.291480836629851,0,0,0,0.185194527369712,0.188368457004691,0.27338845544205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,3.16011120628178,0,0,2.7283372825337,2.68540043501222,4.37098980518783,3.36547258655913,2.36303243479324,4.03865799792591,3.96275394605999,2.82313318383153,2.53390489923356,4.81059208201647,4.79195298944433,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0 | |||
|short_description=p1@uc007ttz.1 | |||
}} |
Revision as of 02:21, 13 September 2013
Short description: | p1@uc007ttz.1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_uc007ttz.1_5end |
Coexpression cluster: | MCL_coexpression_mm9:4 |
Association with transcript: | 13bp_to_uc007ttz.1_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.