FFCP PHASE1:Mm9::chr13:73910344..73910364,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=2084|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:73910344..73910364,+|id=chr13:73910344..73910364,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000791,3.22e-15,9;CL:0000789,3.22e-15,9;CL:0002420,3.22e-15,9;CL:0002419,3.22e-15,9;CL:0000790,3.22e-15,9;CL:0000084,1.98e-12,11;CL:0000827,1.98e-12,11;CL:0000624,2.09e-11,8;CL:0000838,2.20e-11,12;CL:0000542,1.70e-10,13;CL:0000051,1.70e-10,13;CL:0000738,5.51e-08,17;CL:0002087,5.51e-08,17;CL:0002031,2.19e-07,25;CL:0000815,7.38e-07,1;CL:0000792,7.38e-07,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000065!2.09e-12!41;UBERON:0001004!7.10e-12!42;UBERON:0004177!1.53e-11!29;UBERON:0002370!3.96e-11!23;UBERON:0000974!3.96e-11!23;UBERON:0004807!3.96e-11!23;UBERON:0005058!3.96e-11!23;UBERON:0003351!3.96e-11!23;UBERON:0009113!3.96e-11!23;UBERON:0003295!3.96e-11!23;UBERON:0009722!3.96e-11!23;UBERON:0005562!3.96e-11!23;UBERON:0007690!3.96e-11!23;UBERON:0006562!2.15e-10!24;UBERON:0003408!2.15e-10!24;UBERON:0001557!2.15e-10!24;UBERON:0001042!2.15e-10!24;UBERON:0008814!2.15e-10!24;UBERON:0009145!2.15e-10!24;UBERON:0000072!1.32e-09!27;UBERON:0002390!2.68e-08!45;UBERON:0003061!2.68e-08!45;UBERON:0002193!3.52e-08!48;UBERON:0000063!1.97e-07!35|ontology_enrichment_uberon_v019_2=UBERON:0002370,3.22e-31,23;UBERON:0000974,3.22e-31,23;UBERON:0004807,3.22e-31,23;UBERON:0005058,3.22e-31,23;UBERON:0003351,3.22e-31,23;UBERON:0009113,3.22e-31,23;UBERON:0003295,3.22e-31,23;UBERON:0009722,3.22e-31,23;UBERON:0005562,3.22e-31,23;UBERON:0007690,3.22e-31,23;UBERON:0006562,7.46e-30,24;UBERON:0003408,7.46e-30,24;UBERON:0001557,7.46e-30,24;UBERON:0001042,7.46e-30,24;UBERON:0008814,7.46e-30,24;UBERON:0009145,7.46e-30,24;UBERON:0000072,2.30e-26,27;UBERON:0004177,1.94e-24,29;UBERON:0005057,1.94e-24,29;UBERON:0000077,5.63e-20,35;UBERON:0007811,2.24e-19,36;UBERON:0002390,7.20e-18,45;UBERON:0003061,7.20e-18,45;UBERON:0000065,8.17e-17,41;UBERON:0002193,1.22e-16,48;UBERON:0002405,1.22e-16,48;UBERON:0001004,2.25e-16,42;UBERON:0000153,5.90e-16,43;UBERON:0003929,4.17e-12,55;UBERON:0002530,8.61e-12,65;UBERON:0002368,5.91e-11,60;UBERON:0000490,8.43e-10,66;UBERON:0005911,2.68e-09,69;UBERON:0000949,7.74e-09,72;UBERON:0003081,2.41e-08,87;UBERON:0001041,8.91e-08,80|phase1_expression=0,0,0,0,0,0,0,4.00282302668886,0.422366166455,0,0,0,9.24483941628511,5.76974655965383,0.333109761815663,0,0,0.630924330716475,1.23402990245165,0.84877930359606,0.17008658030214,0.0992909512008853,0,0,0,0,0,0,0.380046838912748,0.252030129759931,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.62681071005672,2.01656279485478,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0.253359865475099,0,0.22836775943812,0.776813650941515,0,0.346970653532272,0,0,0,0,0,0,0.289198713839823,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0.162241263067758,0,0.373220911830279,0,0,0.130120442962704,0,0.180062129805349,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0.116765342367169,0.16455984991348,0.32833492815819,0.162137619091711,0.584799949701329,0,0.536825675041487,0,0,0.660837565967596,0.528901133327089,0,0,0,0,0.22237804384487,0,0,0.164698954724011,0.251335208800269,0.198956472041151,0,0,0,0.199141273254367,0,0,0,0,0.193952487167626,0,0.0632365371242573,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0.554259570499814,0,0,0.169745085775188,0,0.335012514883631,0.476087281772027,0.390267295715598,0,0.8858587585951,0.318909537314974,0,0.863424909329478,0.723245292907558,0,0,0.491764273019036,1.10374698521893,0.160550589987792,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0.632073515871632,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0,0,0.180938774784468,0.238744688006273,0.328281799490123,0,0,0,0.206386867963223,0,0.188368457004691,0.27338845544205,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0,0,0.777689839750757,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0.632022241256357,0.405450430580328,2.15693010046137,2.7283372825337,2.32734704367726,0.79472541912506,2.16351809135944,1.62458479892035,1.11063094942962,1.447929326445,1.61321896218945,0.877120926657772,1.25075394132428,2.22066114144981,0,0,0,0,0.772758376128762,0.187682475451182,0.183151624267265,0.214368379079066,0,0,0,0,0,0,0,0,0.45032120322422,0,0,0,0,0.170733605754134,0.243106717068294,0,0,0,0.206035057238894,0,0.252697211763798,0,0.377252682772152,0,0.0640251524048693,0.17230640686684,0.476293691283074,0,0,0,0.147198920134397,0,0.177475806159338,0,0,0.0941093804153306,0.0846146078916765,0.182927972872773,0.263069711437843,0.135804113845862,0.561142271657738,0.118635018124174,0,0,0,0.192906610981141,0,0.233931608445408,0,0,0.220591419119515,0|short_description=p@chr13:73910344..73910364,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=2084 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr13:73910344..73910364,+ | |||
|id=chr13:73910344..73910364,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,3.22e-15,9;CL:0000789,3.22e-15,9;CL:0002420,3.22e-15,9;CL:0002419,3.22e-15,9;CL:0000790,3.22e-15,9;CL:0000084,1.98e-12,11;CL:0000827,1.98e-12,11;CL:0000624,2.09e-11,8;CL:0000838,2.20e-11,12;CL:0000542,1.70e-10,13;CL:0000051,1.70e-10,13;CL:0000738,5.51e-08,17;CL:0002087,5.51e-08,17;CL:0002031,2.19e-07,25;CL:0000815,7.38e-07,1;CL:0000792,7.38e-07,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000065!2.09e-12!41;UBERON:0001004!7.10e-12!42;UBERON:0004177!1.53e-11!29;UBERON:0002370!3.96e-11!23;UBERON:0000974!3.96e-11!23;UBERON:0004807!3.96e-11!23;UBERON:0005058!3.96e-11!23;UBERON:0003351!3.96e-11!23;UBERON:0009113!3.96e-11!23;UBERON:0003295!3.96e-11!23;UBERON:0009722!3.96e-11!23;UBERON:0005562!3.96e-11!23;UBERON:0007690!3.96e-11!23;UBERON:0006562!2.15e-10!24;UBERON:0003408!2.15e-10!24;UBERON:0001557!2.15e-10!24;UBERON:0001042!2.15e-10!24;UBERON:0008814!2.15e-10!24;UBERON:0009145!2.15e-10!24;UBERON:0000072!1.32e-09!27;UBERON:0002390!2.68e-08!45;UBERON:0003061!2.68e-08!45;UBERON:0002193!3.52e-08!48;UBERON:0000063!1.97e-07!35 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,3.22e-31,23;UBERON:0000974,3.22e-31,23;UBERON:0004807,3.22e-31,23;UBERON:0005058,3.22e-31,23;UBERON:0003351,3.22e-31,23;UBERON:0009113,3.22e-31,23;UBERON:0003295,3.22e-31,23;UBERON:0009722,3.22e-31,23;UBERON:0005562,3.22e-31,23;UBERON:0007690,3.22e-31,23;UBERON:0006562,7.46e-30,24;UBERON:0003408,7.46e-30,24;UBERON:0001557,7.46e-30,24;UBERON:0001042,7.46e-30,24;UBERON:0008814,7.46e-30,24;UBERON:0009145,7.46e-30,24;UBERON:0000072,2.30e-26,27;UBERON:0004177,1.94e-24,29;UBERON:0005057,1.94e-24,29;UBERON:0000077,5.63e-20,35;UBERON:0007811,2.24e-19,36;UBERON:0002390,7.20e-18,45;UBERON:0003061,7.20e-18,45;UBERON:0000065,8.17e-17,41;UBERON:0002193,1.22e-16,48;UBERON:0002405,1.22e-16,48;UBERON:0001004,2.25e-16,42;UBERON:0000153,5.90e-16,43;UBERON:0003929,4.17e-12,55;UBERON:0002530,8.61e-12,65;UBERON:0002368,5.91e-11,60;UBERON:0000490,8.43e-10,66;UBERON:0005911,2.68e-09,69;UBERON:0000949,7.74e-09,72;UBERON:0003081,2.41e-08,87;UBERON:0001041,8.91e-08,80 | |||
|phase1_expression=0,0,0,0,0,0,0,4.00282302668886,0.422366166455,0,0,0,9.24483941628511,5.76974655965383,0.333109761815663,0,0,0.630924330716475,1.23402990245165,0.84877930359606,0.17008658030214,0.0992909512008853,0,0,0,0,0,0,0.380046838912748,0.252030129759931,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.62681071005672,2.01656279485478,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0.253359865475099,0,0.22836775943812,0.776813650941515,0,0.346970653532272,0,0,0,0,0,0,0.289198713839823,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0.162241263067758,0,0.373220911830279,0,0,0.130120442962704,0,0.180062129805349,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0.116765342367169,0.16455984991348,0.32833492815819,0.162137619091711,0.584799949701329,0,0.536825675041487,0,0,0.660837565967596,0.528901133327089,0,0,0,0,0.22237804384487,0,0,0.164698954724011,0.251335208800269,0.198956472041151,0,0,0,0.199141273254367,0,0,0,0,0.193952487167626,0,0.0632365371242573,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0.554259570499814,0,0,0.169745085775188,0,0.335012514883631,0.476087281772027,0.390267295715598,0,0.8858587585951,0.318909537314974,0,0.863424909329478,0.723245292907558,0,0,0.491764273019036,1.10374698521893,0.160550589987792,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0.632073515871632,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0,0,0.180938774784468,0.238744688006273,0.328281799490123,0,0,0,0.206386867963223,0,0.188368457004691,0.27338845544205,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0,0,0.777689839750757,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0.632022241256357,0.405450430580328,2.15693010046137,2.7283372825337,2.32734704367726,0.79472541912506,2.16351809135944,1.62458479892035,1.11063094942962,1.447929326445,1.61321896218945,0.877120926657772,1.25075394132428,2.22066114144981,0,0,0,0,0.772758376128762,0.187682475451182,0.183151624267265,0.214368379079066,0,0,0,0,0,0,0,0,0.45032120322422,0,0,0,0,0.170733605754134,0.243106717068294,0,0,0,0.206035057238894,0,0.252697211763798,0,0.377252682772152,0,0.0640251524048693,0.17230640686684,0.476293691283074,0,0,0,0.147198920134397,0,0.177475806159338,0,0,0.0941093804153306,0.0846146078916765,0.182927972872773,0.263069711437843,0.135804113845862,0.561142271657738,0.118635018124174,0,0,0,0.192906610981141,0,0.233931608445408,0,0,0.220591419119515,0 | |||
|short_description=p@chr13:73910344..73910364,+ | |||
}} |
Revision as of 01:05, 13 September 2013
Short description: | p@chr13:73910344..73910364, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:73910344..73910364, + |
Coexpression cluster: | MCL_coexpression_mm9:2084 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 3.22e-15 | 9 |
alpha-beta T cell | 3.22e-15 | 9 |
immature T cell | 3.22e-15 | 9 |
mature T cell | 3.22e-15 | 9 |
immature alpha-beta T cell | 3.22e-15 | 9 |
T cell | 1.98e-12 | 11 |
pro-T cell | 1.98e-12 | 11 |
CD4-positive, alpha-beta T cell | 2.09e-11 | 8 |
lymphoid lineage restricted progenitor cell | 2.20e-11 | 12 |
lymphocyte | 1.70e-10 | 13 |
common lymphoid progenitor | 1.70e-10 | 13 |
leukocyte | 5.51e-08 | 17 |
nongranular leukocyte | 5.51e-08 | 17 |
hematopoietic lineage restricted progenitor cell | 2.19e-07 | 25 |
regulatory T cell | 7.38e-07 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 7.38e-07 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.