FFCP PHASE1:Hg19::chr11:125774362..125774414,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=29118|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=18698|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000530414_5end|coexpression_cluster_id=C529|description=CAGE_peak_1_at_DDX25_5end|id=chr11:125774362..125774414,+|ontology_enrichment_celltype=CL:0000047!8.68e-09!8;CL:0000133!3.18e-08!59;CL:0000148!1.52e-07!10;CL:0000541!1.52e-07!10;CL:0000147!2.70e-07!14;CL:0000540!5.44e-07!6;CL:0000031!5.44e-07!6;CL:0000404!5.44e-07!6;CL:0002322!5.76e-07!5|ontology_enrichment_celltype_v019=CL:0000540;1.11e-10;6!CL:0000404;1.11e-10;6!CL:0002322;1.41e-10;5!CL:0002321;7.41e-09;15|ontology_enrichment_celltype_v019_2=CL:0000047,1.25e-13,8;CL:0000540,1.22e-10,6;CL:0000031,1.22e-10,6;CL:0000404,1.22e-10,6;CL:0002322,1.35e-10,5;CL:0000133,8.73e-07,59|ontology_enrichment_development_v019=UBERON:0006601;6.36e-20;82!CL:0000031;1.11e-10;6!UBERON:0006215;3.15e-07;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005743!5.53e-57!86;UBERON:0000073!5.02e-56!94;UBERON:0001016!5.02e-56!94;UBERON:0001017!2.44e-55!82;UBERON:0001049!1.06e-52!57;UBERON:0005068!1.06e-52!57;UBERON:0006241!1.06e-52!57;UBERON:0007135!1.06e-52!57;UBERON:0002616!2.16e-45!59;UBERON:0002346!1.49e-44!90;UBERON:0003075!5.77e-43!86;UBERON:0007284!5.77e-43!86;UBERON:0000955!9.98e-43!69;UBERON:0006238!9.98e-43!69;UBERON:0002780!1.11e-41!41;UBERON:0001890!1.11e-41!41;UBERON:0006240!1.11e-41!41;UBERON:0003080!2.57e-40!42;UBERON:0007023!3.02e-37!115;UBERON:0000924!1.17e-34!173;UBERON:0006601!1.17e-34!173;UBERON:0002020!1.18e-34!34;UBERON:0003528!1.18e-34!34;UBERON:0001893!1.26e-34!34;UBERON:0002791!1.69e-33!33;UBERON:0004121!4.63e-33!169;UBERON:0001869!6.72e-33!32;UBERON:0003056!1.05e-32!61;UBERON:0000153!7.00e-28!129;UBERON:0007811!7.00e-28!129;UBERON:0000033!2.13e-26!123;UBERON:0002619!3.79e-25!22;UBERON:0000956!5.71e-25!25;UBERON:0000203!5.71e-25!25;UBERON:0001950!7.99e-23!20;UBERON:0003076!4.26e-13!15;UBERON:0003057!4.26e-13!15;UBERON:0002420!1.63e-11!9;UBERON:0007245!1.63e-11!9;UBERON:0010009!1.63e-11!9;UBERON:0010011!1.63e-11!9;UBERON:0000454!1.63e-11!9;UBERON:0002308!4.43e-11!9;UBERON:0000125!4.43e-11!9;UBERON:0004733!2.39e-10!12;UBERON:0002028!2.39e-10!12;UBERON:0007277!2.39e-10!12;UBERON:0004732!2.68e-09!13;UBERON:0009663!4.00e-09!7;UBERON:0001894!2.38e-08!7;UBERON:0006222!2.38e-08!7;UBERON:0000200!2.53e-08!6;UBERON:0001871!3.57e-08!7;UBERON:0000064!6.56e-08!219;UBERON:0000025!7.40e-08!194;UBERON:0002680!1.54e-07!9;UBERON:0001895!1.54e-07!9;UBERON:0010092!1.54e-07!9;UBERON:0000349!1.84e-07!5;UBERON:0001872!2.33e-07!5;UBERON:0002021!4.01e-07!5;UBERON:0002298!5.54e-07!8|ontology_enrichment_uberon_v019=UBERON:0002780;2.04e-45;41!UBERON:0001890;2.04e-45;41!UBERON:0001893;3.75e-44;34!UBERON:0003528;7.83e-44;34!UBERON:0002020;7.83e-44;34!UBERON:0001869;1.01e-43;32!UBERON:0002791;2.52e-43;32!UBERON:0000073;2.19e-42;53!UBERON:0002616;2.19e-42;53!UBERON:0002619;1.79e-41;22!UBERON:0001950;1.49e-37;20!UBERON:0000956;7.78e-36;25!UBERON:0000203;7.78e-36;25!UBERON:0001017;2.83e-31;75!UBERON:0000955;3.72e-30;68!UBERON:0001016;2.86e-28;83!UBERON:0002420;3.48e-18;9!UBERON:0007245;3.48e-18;9!UBERON:0010009;3.48e-18;9!UBERON:0010011;3.48e-18;9!UBERON:0000454;3.48e-18;9!UBERON:0000125;1.90e-17;9!UBERON:0002308;1.90e-17;9!UBERON:0009663;3.32e-14;7!UBERON:0007023;5.25e-13;114!UBERON:0000200;6.65e-13;6!UBERON:0001894;6.87e-13;7!UBERON:0004733;3.99e-12;12!UBERON:0002028;3.99e-12;12!UBERON:0000349;1.91e-11;5!UBERON:0002298;2.66e-11;6!UBERON:0001872;2.93e-11;5!UBERON:0001871;3.38e-11;6!UBERON:0004732;4.85e-11;13!UBERON:0002021;7.35e-11;5!UBERON:0011216;2.69e-10;132!UBERON:0000369;1.58e-09;4!UBERON:0002435;1.58e-09;4!UBERON:0000204;1.58e-09;4!UBERON:0003296;2.70e-08;4!UBERON:0010133;2.70e-08;4!UBERON:0002784;7.08e-08;4!UBERON:0002680;9.27e-08;9!UBERON:0001895;9.27e-08;9!UBERON:0005383;1.32e-07;3!UBERON:0005382;1.32e-07;3!UBERON:0001870;2.93e-07;3!UBERON:0010314;5.15e-07;132|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.38e-86,89;UBERON:0001017,3.61e-86,81;UBERON:0001049,1.50e-79,56;UBERON:0005068,1.50e-79,56;UBERON:0006241,1.50e-79,56;UBERON:0007135,1.50e-79,56;UBERON:0000073,1.54e-74,53;UBERON:0002616,1.54e-74,53;UBERON:0000955,2.94e-65,68;UBERON:0006238,2.94e-65,68;UBERON:0002780,1.22e-63,41;UBERON:0001890,1.22e-63,41;UBERON:0003080,1.22e-63,41;UBERON:0006240,1.22e-63,41;UBERON:0002346,4.86e-55,86;UBERON:0003075,6.84e-54,82;UBERON:0007284,6.84e-54,82;UBERON:0003528,6.75e-52,34;UBERON:0002020,6.75e-52,34;UBERON:0001893,7.52e-52,34;UBERON:0001869,6.03e-49,32;UBERON:0002791,1.68e-48,32;UBERON:0004121,3.29e-46,171;UBERON:0000924,3.29e-46,171;UBERON:0006601,3.29e-46,171;UBERON:0010371,1.54e-44,104;UBERON:0003056,2.18e-43,61;UBERON:0002619,1.89e-41,22;UBERON:0007023,1.31e-38,114;UBERON:0001950,1.52e-37,20;UBERON:0000956,8.13e-36,25;UBERON:0000203,8.13e-36,25;UBERON:0010314,4.60e-33,132;UBERON:0011216,1.18e-26,223;UBER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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=29118 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18698 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000530414_5end | |||
|coexpression_cluster_id=C529 | |||
|description=CAGE_peak_1_at_DDX25_5end | |||
|id=chr11:125774362..125774414,+ | |||
|ontology_enrichment_celltype=CL:0000047!8.68e-09!8;CL:0000133!3.18e-08!59;CL:0000148!1.52e-07!10;CL:0000541!1.52e-07!10;CL:0000147!2.70e-07!14;CL:0000540!5.44e-07!6;CL:0000031!5.44e-07!6;CL:0000404!5.44e-07!6;CL:0002322!5.76e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000540;1.11e-10;6!CL:0000404;1.11e-10;6!CL:0002322;1.41e-10;5!CL:0002321;7.41e-09;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.25e-13,8;CL:0000540,1.22e-10,6;CL:0000031,1.22e-10,6;CL:0000404,1.22e-10,6;CL:0002322,1.35e-10,5;CL:0000133,8.73e-07,59 | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.36e-20;82!CL:0000031;1.11e-10;6!UBERON:0006215;3.15e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p1@DDX25 | |||
}} |
Revision as of 16:30, 10 September 2013
Short description: | p1@DDX25 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_DDX25_5end |
Coexpression cluster: | C529_testis_temporal_amygdala_occipital_insula_brain_putamen |
Association with transcript: | 0bp_to_ENST00000530414_5end |
EntrezGene: | DDX25 |
HGNC: | 18698 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.25e-13 | 8 |
neuron | 1.22e-10 | 6 |
neuroblast | 1.22e-10 | 6 |
electrically signaling cell | 1.22e-10 | 6 |
embryonic stem cell | 1.35e-10 | 5 |
neurectodermal cell | 8.73e-07 | 59 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.