FFCP PHASE1:Hg19::chr10:123923205..123923292,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10579|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11523|TSSclassifier=S|UniProt=D6RAA5|association_with_transcript=0bp_to_ENST00000369004_5end|coexpression_cluster_id=C3|description=CAGE_peak_3_at_TACC2_5end|id=chr10:123923205..123923292,+|ontology_enrichment_celltype=CL:0000047!4.98e-09!8;CL:0000133!2.20e-07!59;CL:0002319!2.32e-07!25;CL:0000540!3.78e-07!6;CL:0000031!3.78e-07!6;CL:0000404!3.78e-07!6|ontology_enrichment_celltype_v019=CL:0000540;3.52e-11;6!CL:0000404;3.52e-11;6!CL:0002322;1.95e-09;5!CL:0002321;8.86e-09;15|ontology_enrichment_celltype_v019_2=CL:0000047,2.08e-14,8;CL:0000540,3.50e-11,6;CL:0000031,3.50e-11,6;CL:0000404,3.50e-11,6;CL:0002322,2.53e-09,5|ontology_enrichment_development_v019=UBERON:0006601;9.51e-19;82!CL:0000031;3.52e-11;6!UBERON:0006215;6.03e-08;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3095;6.72e-08;22!DOID:2994;6.72e-08;22|ontology_enrichment_disease_v019_2=DOID:3095,6.51e-08,22;DOID:2994,6.51e-08,22|ontology_enrichment_uberon=UBERON:0000073!1.17e-59!94;UBERON:0001016!1.17e-59!94;UBERON:0001017!5.04e-59!82;UBERON:0005743!6.65e-57!86;UBERON:0001049!4.12e-55!57;UBERON:0005068!4.12e-55!57;UBERON:0006241!4.12e-55!57;UBERON:0007135!4.12e-55!57;UBERON:0002616!1.39e-49!59;UBERON:0003075!2.87e-46!86;UBERON:0007284!2.87e-46!86;UBERON:0000955!3.98e-46!69;UBERON:0006238!3.98e-46!69;UBERON:0002346!9.24e-45!90;UBERON:0002780!3.22e-43!41;UBERON:0001890!3.22e-43!41;UBERON:0006240!3.22e-43!41;UBERON:0003080!8.37e-42!42;UBERON:0004121!7.50e-38!169;UBERON:0000924!2.18e-37!173;UBERON:0006601!2.18e-37!173;UBERON:0001893!3.23e-36!34;UBERON:0002020!3.30e-36!34;UBERON:0003528!3.30e-36!34;UBERON:0003056!1.47e-35!61;UBERON:0002791!5.23e-35!33;UBERON:0001869!1.53e-34!32;UBERON:0000153!8.71e-33!129;UBERON:0007811!8.71e-33!129;UBERON:0007023!1.07e-32!115;UBERON:0000033!1.13e-31!123;UBERON:0000956!6.96e-27!25;UBERON:0000203!6.96e-27!25;UBERON:0002619!5.03e-25!22;UBERON:0001950!6.59e-23!20;UBERON:0003076!6.04e-14!15;UBERON:0003057!6.04e-14!15;UBERON:0000025!2.77e-12!194;UBERON:0000119!5.04e-12!312;UBERON:0004732!6.30e-12!13;UBERON:0000064!1.62e-11!219;UBERON:0004733!3.79e-11!12;UBERON:0002028!3.79e-11!12;UBERON:0007277!3.79e-11!12;UBERON:0000483!5.34e-11!309;UBERON:0002420!7.67e-11!9;UBERON:0007245!7.67e-11!9;UBERON:0010009!7.67e-11!9;UBERON:0010011!7.67e-11!9;UBERON:0000454!7.67e-11!9;UBERON:0002308!1.15e-10!9;UBERON:0000125!1.15e-10!9;UBERON:0000922!1.42e-10!612;UBERON:0000477!1.48e-10!286;UBERON:0000475!1.09e-09!365;UBERON:0004111!1.74e-09!241;UBERON:0009663!1.16e-08!7;UBERON:0000200!1.86e-08!6;UBERON:0000481!2.15e-08!347;UBERON:0002680!2.61e-08!9;UBERON:0001895!2.61e-08!9;UBERON:0010092!2.61e-08!9;UBERON:0001894!2.75e-08!7;UBERON:0006222!2.75e-08!7;UBERON:0001871!4.42e-08!7;UBERON:0002050!6.48e-08!605;UBERON:0005423!6.48e-08!605;UBERON:0000923!1.35e-07!604;UBERON:0005291!1.35e-07!604;UBERON:0006598!1.35e-07!604;UBERON:0002532!1.35e-07!604;UBERON:0002021!2.18e-07!5;UBERON:0001872!2.37e-07!5;UBERON:0000468!2.73e-07!659;UBERON:0000349!4.63e-07!5;UBERON:0002298!5.07e-07!8|ontology_enrichment_uberon_v019=UBERON:0002780;6.30e-48;41!UBERON:0001890;6.30e-48;41!UBERON:0001893;1.58e-47;34!UBERON:0001869;2.19e-47;32!UBERON:0003528;3.11e-47;34!UBERON:0002020;3.11e-47;34!UBERON:0002791;7.27e-47;32!UBERON:0000073;2.89e-45;53!UBERON:0002616;2.89e-45;53!UBERON:0002619;1.88e-42;22!UBERON:0000956;8.20e-40;25!UBERON:0000203;8.20e-40;25!UBERON:0001950;8.54e-39;20!UBERON:0001017;2.76e-31;75!UBERON:0000955;8.25e-31;68!UBERON:0001016;2.49e-28;83!UBERON:0002420;1.58e-17;9!UBERON:0007245;1.58e-17;9!UBERON:0010009;1.58e-17;9!UBERON:0010011;1.58e-17;9!UBERON:0000454;1.58e-17;9!UBERON:0000125;3.13e-17;9!UBERON:0002308;3.13e-17;9!UBERON:0004732;2.74e-14;13!UBERON:0009663;8.83e-14;7!UBERON:0000200;1.94e-13;6!UBERON:0001894;3.25e-13;7!UBERON:0004733;5.37e-13;12!UBERON:0002028;5.37e-13;12!UBERON:0002298;8.11e-12;6!UBERON:0007023;8.38e-12;114!UBERON:0002021;1.43e-11;5!UBERON:0001872;1.57e-11;5!UBERON:0001871;2.63e-11;6!UBERON:0011216;3.65e-11;132!UBERON:0000349;4.98e-11;5!UBERON:0000369;2.59e-09;4!UBERON:0002435;2.59e-09;4!UBERON:0000204;2.59e-09;4!UBERON:0002680;1.96e-08;9!UBERON:0001895;1.96e-08;9!UBERON:0003296;3.90e-08;4!UBERON:0010133;3.90e-08;4!UBERON:0002784;9.25e-08;4!UBERON:0000922;1.92e-07;49!UBERON:0001870;1.92e-07;3!UBERON:0005383;2.74e-07;3!UBERON:0005382;2.74e-07;3!UBERON:0000988;6.95e-07;3!UBERON:0010314;9.49e-07;132|ontology_enrichment_uberon_v019_2=UBERON:0001016,9.53e-90,89;UBERON:0001017,3.04e-86,81;UBERON:0001049,4.15e-85,56;UBERON:0005068,4.15e-85,56;UBERON:0006241,4.15e-85,56;UBERON:0007135,4.15e-85,56;UBERON:0000073,7.31e-80,53;UBERON:0002616,7.31e-80,53;UBERON:0002780,5.10e-68,41;UBERON:0001890,5.10e-68,41;UBERON:0003080,5.10e-68,41;UBERON:0006240,5.10e-68,41;UBERON:0000955,4.18e-67,68;UBERON:0006238,4.18e-67,68;UBERON:0003075,1.83e-62,82;UBERON:0007284,1.83e-62,82;UBERON:0002346,3.51e-61,86;UBERON:0001893,6.21e-56,34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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10579 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11523 | |||
|TSSclassifier=S | |||
|UniProt=D6RAA5 | |||
|association_with_transcript=0bp_to_ENST00000369004_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_3_at_TACC2_5end | |||
|id=chr10:123923205..123923292,+ | |||
|ontology_enrichment_celltype=CL:0000047!4.98e-09!8;CL:0000133!2.20e-07!59;CL:0002319!2.32e-07!25;CL:0000540!3.78e-07!6;CL:0000031!3.78e-07!6;CL:0000404!3.78e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000540;3.52e-11;6!CL:0000404;3.52e-11;6!CL:0002322;1.95e-09;5!CL:0002321;8.86e-09;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,2.08e-14,8;CL:0000540,3.50e-11,6;CL:0000031,3.50e-11,6;CL:0000404,3.50e-11,6;CL:0002322,2.53e-09,5 | |||
|ontology_enrichment_development_v019=UBERON:0006601;9.51e-19;82!CL:0000031;3.52e-11;6!UBERON:0006215;6.03e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3095;6.72e-08;22!DOID:2994;6.72e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,6.51e-08,22;DOID:2994,6.51e-08,22 | |||
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| |||
|short_description=p3@TACC2 | |||
}} |
Revision as of 12:07, 10 September 2013
Short description: | p3@TACC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_TACC2_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000369004_5end |
EntrezGene: | TACC2 |
HGNC: | 11523 |
UniProt: | D6RAA5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 2.08e-14 | 8 |
neuron | 3.50e-11 | 6 |
neuroblast | 3.50e-11 | 6 |
electrically signaling cell | 3.50e-11 | 6 |
embryonic stem cell | 2.53e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 6.51e-08 | 22 |
germ cell cancer | 6.51e-08 | 22 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.