FFCP PHASE1:Hg19::chr5:125706998..125707018,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000066!6.92e-15!254;CL:1000497!1.26e-12!18;CL:0002518!1.26e-12!18;CL:0000223!1.67e-12!59;CL:1000449!7.75e-10!16;CL:1000507!1.63e-09!12;CL:1000494!1.63e-09!12;CL:0000181!2.03e-08!12;CL:0000417!2.03e-08!12;CL:0000668!2.03e-08!12;CL:0000414!2.03e-08!12;CL:0000412!2.03e-08!12;CL:0000182!2.03e-08!12;CL:0002681!3.20e-08!13;CL:0002584!3.20e-08!13;CL:0000244!8.66e-07!4;CL:0000731!8.66e-07!4 | |ontology_enrichment_celltype=CL:0000066!6.92e-15!254;CL:1000497!1.26e-12!18;CL:0002518!1.26e-12!18;CL:0000223!1.67e-12!59;CL:1000449!7.75e-10!16;CL:1000507!1.63e-09!12;CL:1000494!1.63e-09!12;CL:0000181!2.03e-08!12;CL:0000417!2.03e-08!12;CL:0000668!2.03e-08!12;CL:0000414!2.03e-08!12;CL:0000412!2.03e-08!12;CL:0000182!2.03e-08!12;CL:0002681!3.20e-08!13;CL:0002584!3.20e-08!13;CL:0000244!8.66e-07!4;CL:0000731!8.66e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:1000497;1.51e-12;17!CL:0002518;1.51e-12;17!CL:1000507;7.43e-12;10!CL:1000494;7.43e-12;10!CL:0000182;1.61e-10;12!CL:1000449;3.04e-09;15!CL:0000244;3.08e-08;4!CL:0000731;3.08e-08;4!CL:0002681;3.39e-07;12!CL:0002584;3.39e-07;12 | |ontology_enrichment_celltype_v019=CL:1000497;1.51e-12;17!CL:0002518;1.51e-12;17!CL:1000507;7.43e-12;10!CL:1000494;7.43e-12;10!CL:0000182;1.61e-10;12!CL:1000449;3.04e-09;15!CL:0000244;3.08e-08;4!CL:0000731;3.08e-08;4!CL:0002681;3.39e-07;12!CL:0002584;3.39e-07;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.90e-17,253;CL:1000497,1.39e-12,17;CL:0002518,1.39e-12,17;CL:0000223,1.51e-12,58;CL:1000507,6.88e-12,10;CL:1000494,6.88e-12,10;CL:0000182,1.38e-10,12;CL:1000449,2.80e-09,15;CL:0000244,3.61e-08,4;CL:0000731,3.61e-08,4;CL:0002681,3.32e-07,12;CL:0002584,3.32e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0009497;6.54e-15;13!UBERON:0004161;2.73e-11;11!UBERON:0003104;1.03e-10;31!UBERON:0006595;6.69e-10;86!UBERON:0008947;1.15e-09;29!UBERON:0001041;6.84e-09;30!CL:0000223;4.92e-08;58!UBERON:0009847;4.11e-07;3!UBERON:0003353;4.11e-07;3 | |ontology_enrichment_development_v019=UBERON:0009497;6.54e-15;13!UBERON:0004161;2.73e-11;11!UBERON:0003104;1.03e-10;31!UBERON:0006595;6.69e-10;86!UBERON:0008947;1.15e-09;29!UBERON:0001041;6.84e-09;30!CL:0000223;4.92e-08;58!UBERON:0009847;4.11e-07;3!UBERON:0003353;4.11e-07;3 | ||
|ontology_enrichment_disease=DOID:305!7.42e-18!106;DOID:0050687!6.81e-13!143;DOID:299!1.29e-11!25 | |ontology_enrichment_disease=DOID:305!7.42e-18!106;DOID:0050687!6.81e-13!143;DOID:299!1.29e-11!25 | ||
|ontology_enrichment_disease_v019=DOID:299;1.28e-11;25 | |ontology_enrichment_disease_v019=DOID:299;1.28e-11;25 | ||
|ontology_enrichment_disease_v019_2=DOID:305,1.56e-20,106;DOID:0050687,4.89e-15,143;DOID:299,1.42e-11,25 | |||
|ontology_enrichment_uberon=UBERON:0004119!6.73e-28!169;UBERON:0000925!6.73e-28!169;UBERON:0006595!6.73e-28!169;UBERON:0004921!1.77e-26!129;UBERON:0004185!1.77e-26!129;UBERON:0001008!4.95e-23!45;UBERON:0005172!1.44e-22!55;UBERON:0005173!1.44e-22!55;UBERON:0001007!3.16e-22!155;UBERON:0001555!3.16e-22!155;UBERON:0007026!3.16e-22!155;UBERON:0006554!5.02e-22!44;UBERON:0000077!6.92e-22!130;UBERON:0002417!1.29e-20!61;UBERON:0000916!1.29e-20!61;UBERON:0005177!5.74e-19!107;UBERON:0000466!1.35e-16!126;UBERON:0003104!2.15e-16!238;UBERON:0009142!2.15e-16!238;UBERON:0000058!2.62e-16!26;UBERON:0009497!3.32e-16!25;UBERON:0000015!3.32e-16!25;UBERON:0002423!3.32e-16!25;UBERON:0006235!3.32e-16!25;UBERON:0004161!3.32e-16!25;UBERON:0005911!1.05e-15!82;UBERON:0009856!2.38e-15!26;UBERON:0007499!3.85e-14!25;UBERON:0009569!4.61e-14!113;UBERON:0001041!5.61e-14!98;UBERON:0000489!5.97e-14!32;UBERON:0002113!6.22e-14!27;UBERON:0003918!6.22e-14!27;UBERON:0005095!6.22e-14!27;UBERON:0007687!6.22e-14!27;UBERON:0009854!6.37e-14!23;UBERON:0003064!1.08e-13!37;UBERON:0001737!3.83e-13!9;UBERON:0003929!8.17e-13!54;UBERON:0008835!1.03e-12!22;UBERON:0003894!1.03e-12!22;UBERON:0000080!2.06e-12!18;UBERON:0002120!2.06e-12!18;UBERON:0004875!2.06e-12!18;UBERON:0005721!2.06e-12!18;UBERON:0005754!2.06e-12!18;UBERON:0007297!2.06e-12!18;UBERON:0005409!2.06e-12!35;UBERON:0003887!1.08e-11!21;UBERON:0006555!4.36e-11!17;UBERON:0005103!4.36e-11!17;UBERON:0000083!4.36e-11!17;UBERON:0009201!4.36e-11!17;UBERON:0004819!4.36e-11!17;UBERON:0006553!4.36e-11!17;UBERON:0003074!4.36e-11!17;UBERON:0003060!4.36e-11!17;UBERON:0004876!7.97e-11!20;UBERON:0000160!1.27e-10!27;UBERON:0000481!2.33e-10!347;UBERON:0002100!3.44e-10!216;UBERON:0004211!7.75e-10!16;UBERON:0001285!7.75e-10!16;UBERON:0007684!7.75e-10!16;UBERON:0003220!7.75e-10!16;UBERON:0004208!7.75e-10!16;UBERON:0003886!9.24e-10!63;UBERON:0001046!1.30e-09!19;UBERON:0009773!1.63e-09!12;UBERON:0001231!1.63e-09!12;UBERON:0004810!1.63e-09!12;UBERON:0002107!5.92e-09!19;UBERON:0006925!5.92e-09!19;UBERON:0008836!5.92e-09!19;UBERON:0002294!9.65e-09!7;UBERON:0001173!9.65e-09!7;UBERON:0004912!9.65e-09!7;UBERON:0000464!2.07e-08!104;UBERON:0008947!2.29e-08!38;UBERON:0003258!2.29e-08!38;UBERON:0001225!3.20e-08!13;UBERON:0008987!3.20e-08!13;UBERON:0002553!4.10e-08!70;UBERON:0000065!5.92e-08!53;UBERON:0001048!7.65e-08!168;UBERON:0000062!7.67e-08!511;UBERON:0005256!2.81e-07!143;UBERON:0005156!3.47e-07!59;UBERON:0000990!3.47e-07!59;UBERON:0000059!7.44e-07!11;UBERON:0005057!7.92e-07!26 | |ontology_enrichment_uberon=UBERON:0004119!6.73e-28!169;UBERON:0000925!6.73e-28!169;UBERON:0006595!6.73e-28!169;UBERON:0004921!1.77e-26!129;UBERON:0004185!1.77e-26!129;UBERON:0001008!4.95e-23!45;UBERON:0005172!1.44e-22!55;UBERON:0005173!1.44e-22!55;UBERON:0001007!3.16e-22!155;UBERON:0001555!3.16e-22!155;UBERON:0007026!3.16e-22!155;UBERON:0006554!5.02e-22!44;UBERON:0000077!6.92e-22!130;UBERON:0002417!1.29e-20!61;UBERON:0000916!1.29e-20!61;UBERON:0005177!5.74e-19!107;UBERON:0000466!1.35e-16!126;UBERON:0003104!2.15e-16!238;UBERON:0009142!2.15e-16!238;UBERON:0000058!2.62e-16!26;UBERON:0009497!3.32e-16!25;UBERON:0000015!3.32e-16!25;UBERON:0002423!3.32e-16!25;UBERON:0006235!3.32e-16!25;UBERON:0004161!3.32e-16!25;UBERON:0005911!1.05e-15!82;UBERON:0009856!2.38e-15!26;UBERON:0007499!3.85e-14!25;UBERON:0009569!4.61e-14!113;UBERON:0001041!5.61e-14!98;UBERON:0000489!5.97e-14!32;UBERON:0002113!6.22e-14!27;UBERON:0003918!6.22e-14!27;UBERON:0005095!6.22e-14!27;UBERON:0007687!6.22e-14!27;UBERON:0009854!6.37e-14!23;UBERON:0003064!1.08e-13!37;UBERON:0001737!3.83e-13!9;UBERON:0003929!8.17e-13!54;UBERON:0008835!1.03e-12!22;UBERON:0003894!1.03e-12!22;UBERON:0000080!2.06e-12!18;UBERON:0002120!2.06e-12!18;UBERON:0004875!2.06e-12!18;UBERON:0005721!2.06e-12!18;UBERON:0005754!2.06e-12!18;UBERON:0007297!2.06e-12!18;UBERON:0005409!2.06e-12!35;UBERON:0003887!1.08e-11!21;UBERON:0006555!4.36e-11!17;UBERON:0005103!4.36e-11!17;UBERON:0000083!4.36e-11!17;UBERON:0009201!4.36e-11!17;UBERON:0004819!4.36e-11!17;UBERON:0006553!4.36e-11!17;UBERON:0003074!4.36e-11!17;UBERON:0003060!4.36e-11!17;UBERON:0004876!7.97e-11!20;UBERON:0000160!1.27e-10!27;UBERON:0000481!2.33e-10!347;UBERON:0002100!3.44e-10!216;UBERON:0004211!7.75e-10!16;UBERON:0001285!7.75e-10!16;UBERON:0007684!7.75e-10!16;UBERON:0003220!7.75e-10!16;UBERON:0004208!7.75e-10!16;UBERON:0003886!9.24e-10!63;UBERON:0001046!1.30e-09!19;UBERON:0009773!1.63e-09!12;UBERON:0001231!1.63e-09!12;UBERON:0004810!1.63e-09!12;UBERON:0002107!5.92e-09!19;UBERON:0006925!5.92e-09!19;UBERON:0008836!5.92e-09!19;UBERON:0002294!9.65e-09!7;UBERON:0001173!9.65e-09!7;UBERON:0004912!9.65e-09!7;UBERON:0000464!2.07e-08!104;UBERON:0008947!2.29e-08!38;UBERON:0003258!2.29e-08!38;UBERON:0001225!3.20e-08!13;UBERON:0008987!3.20e-08!13;UBERON:0002553!4.10e-08!70;UBERON:0000065!5.92e-08!53;UBERON:0001048!7.65e-08!168;UBERON:0000062!7.67e-08!511;UBERON:0005256!2.81e-07!143;UBERON:0005156!3.47e-07!59;UBERON:0000990!3.47e-07!59;UBERON:0000059!7.44e-07!11;UBERON:0005057!7.92e-07!26 | ||
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|short_description=p4@GRAMD3 | |short_description=p4@GRAMD3 | ||
}} | }} |
Revision as of 08:18, 20 November 2012
Short description: | p4@GRAMD3 |
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Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_GRAMD3_5end |
Coexpression cluster: | C4458_small_renal_kidney_Hepatocyte_clear_colon_argyrophil |
Association with transcript: | 0bp_to_ENST00000506445_5end |
EntrezGene: | GRAMD3 |
HGNC: | 24911 |
UniProt: | D6REP5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.90e-17 | 253 |
kidney cell | 1.39e-12 | 17 |
kidney epithelial cell | 1.39e-12 | 17 |
endodermal cell | 1.51e-12 | 58 |
kidney tubule cell | 6.88e-12 | 10 |
nephron tubule epithelial cell | 6.88e-12 | 10 |
hepatocyte | 1.38e-10 | 12 |
epithelial cell of nephron | 2.80e-09 | 15 |
transitional epithelial cell | 3.61e-08 | 4 |
urothelial cell | 3.61e-08 | 4 |
kidney cortical cell | 3.32e-07 | 12 |
renal cortical epithelial cell | 3.32e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.56e-20 | 106 |
cell type cancer | 4.89e-15 | 143 |
adenocarcinoma | 1.42e-11 | 25 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.