FFCP PHASE1:Hg19::chr7:81319816..81319864,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000055!1.11e-12!180;CL:0000393!3.52e-09!60;CL:0000211!3.52e-09!60;CL:0002540!5.69e-09!6;CL:0000183!1.32e-08!59;CL:0000680!2.16e-08!57;CL:0000056!2.16e-08!57;CL:0000355!2.16e-08!57;CL:0000187!3.49e-08!54;CL:0000188!2.99e-07!9 | |ontology_enrichment_celltype=CL:0000055!1.11e-12!180;CL:0000393!3.52e-09!60;CL:0000211!3.52e-09!60;CL:0002540!5.69e-09!6;CL:0000183!1.32e-08!59;CL:0000680!2.16e-08!57;CL:0000056!2.16e-08!57;CL:0000355!2.16e-08!57;CL:0000187!3.49e-08!54;CL:0000188!2.99e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000188;6.78e-12;9!CL:0000594;2.91e-10;3!CL:0002564;6.50e-10;3!CL:0002622;4.15e-09;3!CL:0002504;4.98e-09;3!CL:1000279;4.98e-09;3!CL:1000280;4.98e-09;3!CL:0000187;1.85e-07;55!CL:0002602;2.42e-07;2!CL:0000680;4.47e-07;7 | |ontology_enrichment_celltype_v019=CL:0000188;6.78e-12;9!CL:0000594;2.91e-10;3!CL:0002564;6.50e-10;3!CL:0002622;4.15e-09;3!CL:0002504;4.98e-09;3!CL:1000279;4.98e-09;3!CL:1000280;4.98e-09;3!CL:0000187;1.85e-07;55!CL:0002602;2.42e-07;2!CL:0000680;4.47e-07;7 | ||
|ontology_enrichment_celltype_v019_2=CL:0000188,6.12e-12,9;CL:0000594,2.92e-10,3;CL:0002564,6.51e-10,3;CL:0002622,4.46e-09,3;CL:0002504,5.27e-09,3;CL:1000279,5.27e-09,3;CL:1000280,5.27e-09,3;CL:0000680,6.88e-09,58;CL:0000056,6.88e-09,58;CL:0000355,6.88e-09,58;CL:0000187,2.43e-08,55;CL:0002602,2.46e-07,2;CL:0000393,3.49e-07,61;CL:0000211,3.49e-07,61 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3307;4.15e-07;2 | |ontology_enrichment_disease_v019=DOID:3307;4.15e-07;2 | ||
|ontology_enrichment_disease_v019_2=DOID:3307,3.86e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0000914!1.24e-09!83;UBERON:0002329!1.24e-09!83;UBERON:0003077!1.24e-09!83;UBERON:0003059!1.24e-09!83;UBERON:0007282!1.24e-09!83;UBERON:0009618!1.24e-09!83;UBERON:0007285!1.24e-09!83;UBERON:0001134!1.84e-07!61;UBERON:0002036!1.84e-07!61;UBERON:0003082!1.84e-07!61;UBERON:0004290!3.61e-07!70;UBERON:0002385!4.78e-07!63;UBERON:0001015!4.78e-07!63;UBERON:0000383!4.78e-07!63 | |ontology_enrichment_uberon=UBERON:0000914!1.24e-09!83;UBERON:0002329!1.24e-09!83;UBERON:0003077!1.24e-09!83;UBERON:0003059!1.24e-09!83;UBERON:0007282!1.24e-09!83;UBERON:0009618!1.24e-09!83;UBERON:0007285!1.24e-09!83;UBERON:0001134!1.84e-07!61;UBERON:0002036!1.84e-07!61;UBERON:0003082!1.84e-07!61;UBERON:0004290!3.61e-07!70;UBERON:0002385!4.78e-07!63;UBERON:0001015!4.78e-07!63;UBERON:0000383!4.78e-07!63 | ||
|ontology_enrichment_uberon_v019=UBERON:0011135;1.45e-15;5!UBERON:0002216;1.45e-15;5!UBERON:0011134;1.45e-15;5!UBERON:0002209;1.45e-15;5!UBERON:0002213;1.45e-15;5!UBERON:0007844;1.45e-15;5!UBERON:0011138;1.45e-15;5!UBERON:0001130;1.45e-15;5!UBERON:0001066;1.45e-15;5!UBERON:0001468;1.45e-15;5!UBERON:0002242;6.50e-10;3!UBERON:0004905;1.48e-09;8!UBERON:0000982;1.48e-09;8!UBERON:0004770;1.48e-09;8!UBERON:0000075;1.62e-08;16!UBERON:0001134;2.81e-08;16!UBERON:0002036;2.81e-08;16!UBERON:0006444;2.42e-07;2!UBERON:0001995;2.42e-07;2!UBERON:0004715;2.42e-07;2!UBERON:0002385;2.43e-07;31!UBERON:0001015;2.43e-07;31!UBERON:0000383;2.43e-07;31!UBERON:0002204;7.39e-07;70 | |ontology_enrichment_uberon_v019=UBERON:0011135;1.45e-15;5!UBERON:0002216;1.45e-15;5!UBERON:0011134;1.45e-15;5!UBERON:0002209;1.45e-15;5!UBERON:0002213;1.45e-15;5!UBERON:0007844;1.45e-15;5!UBERON:0011138;1.45e-15;5!UBERON:0001130;1.45e-15;5!UBERON:0001066;1.45e-15;5!UBERON:0001468;1.45e-15;5!UBERON:0002242;6.50e-10;3!UBERON:0004905;1.48e-09;8!UBERON:0000982;1.48e-09;8!UBERON:0004770;1.48e-09;8!UBERON:0000075;1.62e-08;16!UBERON:0001134;2.81e-08;16!UBERON:0002036;2.81e-08;16!UBERON:0006444;2.42e-07;2!UBERON:0001995;2.42e-07;2!UBERON:0004715;2.42e-07;2!UBERON:0002385;2.43e-07;31!UBERON:0001015;2.43e-07;31!UBERON:0000383;2.43e-07;31!UBERON:0002204;7.39e-07;70 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0011135,1.48e-15,5;UBERON:0002216,1.48e-15,5;UBERON:0011134,1.48e-15,5;UBERON:0002209,1.48e-15,5;UBERON:0002213,1.48e-15,5;UBERON:0005856,1.48e-15,5;UBERON:0005866,1.48e-15,5;UBERON:0005863,1.48e-15,5;UBERON:0007844,1.48e-15,5;UBERON:0011138,1.48e-15,5;UBERON:0001130,1.48e-15,5;UBERON:0001066,1.48e-15,5;UBERON:0001468,1.48e-15,5;UBERON:0002242,6.51e-10,3;UBERON:0003068,6.51e-10,3;UBERON:0002328,6.51e-10,3;UBERON:0004880,6.51e-10,3;UBERON:0004905,1.49e-09,8;UBERON:0000982,1.49e-09,8;UBERON:0004770,1.49e-09,8;UBERON:0000075,1.65e-08,16;UBERON:0001134,4.49e-08,62;UBERON:0002036,4.49e-08,62;UBERON:0003082,4.49e-08,62;UBERON:0002385,1.05e-07,64;UBERON:0001015,1.05e-07,64;UBERON:0000383,1.05e-07,64;UBERON:0006444,2.46e-07,2;UBERON:0001995,2.46e-07,2;UBERON:0004715,2.46e-07,2;UBERON:0003104,6.98e-07,160;UBERON:0009142,6.98e-07,160 | |||
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| ||
|short_description=p@chr7:81319816..81319864,+ | |short_description=p@chr7:81319816..81319864,+ | ||
}} | }} |
Revision as of 06:47, 18 November 2012
Short description: | p@chr7:81319816..81319864, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:81319816..81319864, + |
Coexpression cluster: | C2903_Skeletal_mesenchymal_glioma_Nucleus_large_sacrococcigeal_Smooth |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell of skeletal muscle | 6.12e-12 | 9 |
skeletal muscle satellite cell | 2.92e-10 | 3 |
nucleus pulposus cell of intervertebral disc | 6.51e-10 | 3 |
prostate stromal cell | 4.46e-09 | 3 |
enteric smooth muscle cell | 5.27e-09 | 3 |
smooth muscle cell of large intestine | 5.27e-09 | 3 |
smooth muscle cell of colon | 5.27e-09 | 3 |
muscle precursor cell | 6.88e-09 | 58 |
myoblast | 6.88e-09 | 58 |
multi-potent skeletal muscle stem cell | 6.88e-09 | 58 |
muscle cell | 2.43e-08 | 55 |
annulus pulposus cell | 2.46e-07 | 2 |
electrically responsive cell | 3.49e-07 | 61 |
electrically active cell | 3.49e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
intervertebral cartilage | 1.48e-15 | 5 |
symphysis | 1.48e-15 | 5 |
nonsynovial joint | 1.48e-15 | 5 |
fibrous joint | 1.48e-15 | 5 |
cartilaginous joint | 1.48e-15 | 5 |
developing mesenchymal condensation | 1.48e-15 | 5 |
pre-cartilage condensation | 1.48e-15 | 5 |
cartilaginous condensation | 1.48e-15 | 5 |
cartilage element | 1.48e-15 | 5 |
post-cranial axial skeletal system | 1.48e-15 | 5 |
vertebral column | 1.48e-15 | 5 |
intervertebral disk | 1.48e-15 | 5 |
intervertebral joint | 1.48e-15 | 5 |
nucleus pulposus | 6.51e-10 | 3 |
axial mesoderm | 6.51e-10 | 3 |
notochord | 6.51e-10 | 3 |
chordamesoderm | 6.51e-10 | 3 |
articulation | 1.49e-09 | 8 |
skeletal joint | 1.49e-09 | 8 |
articular system | 1.49e-09 | 8 |
subdivision of skeletal system | 1.65e-08 | 16 |
skeletal muscle tissue | 4.49e-08 | 62 |
striated muscle tissue | 4.49e-08 | 62 |
myotome | 4.49e-08 | 62 |
muscle tissue | 1.05e-07 | 64 |
musculature | 1.05e-07 | 64 |
musculature of body | 1.05e-07 | 64 |
annulus fibrosus | 2.46e-07 | 2 |
fibrocartilage | 2.46e-07 | 2 |
annulus fibrosus disci intervertebralis | 2.46e-07 | 2 |
mesenchyme | 6.98e-07 | 160 |
entire embryonic mesenchyme | 6.98e-07 | 160 |
Ontology term | p-value | n |
---|---|---|
teratoma | 3.86e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.