FFCP PHASE1:Mm9::chr7:147129712..147129774,+: Difference between revisions
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|id=chr7:147129712..147129774,+ | |id=chr7:147129712..147129774,+ | ||
|ontology_enrichment_celltype=CL:0000791!7.18e-07!9;CL:0000789!7.18e-07!9;CL:0002420!7.18e-07!9;CL:0002419!7.18e-07!9;CL:0000790!7.18e-07!9 | |ontology_enrichment_celltype=CL:0000791!7.18e-07!9;CL:0000789!7.18e-07!9;CL:0002420!7.18e-07!9;CL:0002419!7.18e-07!9;CL:0000790!7.18e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000791,3.24e-11,9;CL:0000789,3.24e-11,9;CL:0002420,3.24e-11,9;CL:0002419,3.24e-11,9;CL:0000790,3.24e-11,9;CL:0000624,1.00e-09,8;CL:0000542,2.21e-09,13;CL:0000051,2.21e-09,13;CL:0000084,5.67e-09,11;CL:0000827,5.67e-09,11;CL:0000349,2.15e-08,3;CL:0000351,2.15e-08,3;CL:0000838,3.92e-08,12;CL:0000738,7.55e-07,17;CL:0002087,7.55e-07,17 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003408!6.58e-14!24;UBERON:0004177!3.48e-13!29;UBERON:0002370!4.94e-13!23;UBERON:0000974!4.94e-13!23;UBERON:0004807!4.94e-13!23;UBERON:0005058!4.94e-13!23;UBERON:0003351!4.94e-13!23;UBERON:0009113!4.94e-13!23;UBERON:0003295!4.94e-13!23;UBERON:0009722!4.94e-13!23;UBERON:0005562!4.94e-13!23;UBERON:0007690!4.94e-13!23;UBERON:0000072!1.98e-12!27;UBERON:0003133!2.48e-12!24;UBERON:0006562!3.40e-12!24;UBERON:0001557!3.40e-12!24;UBERON:0001042!3.40e-12!24;UBERON:0008814!3.40e-12!24;UBERON:0009145!3.40e-12!24;UBERON:0005156!7.57e-11!26;UBERON:0000990!7.57e-11!26;UBERON:0002193!2.26e-10!48;UBERON:0000991!3.96e-09!18;UBERON:0005564!3.96e-09!18;UBERON:0002390!6.00e-09!45;UBERON:0003061!6.00e-09!45;UBERON:0001004!1.95e-08!42;UBERON:0004176!2.91e-08!17;UBERON:0009196!2.91e-08!17;UBERON:0009117!2.91e-08!17;UBERON:0000063!6.13e-08!35;UBERON:0000473!7.03e-08!14;UBERON:0000065!8.45e-08!41;UBERON:0003135!4.10e-07!15 | |ontology_enrichment_uberon=UBERON:0003408!6.58e-14!24;UBERON:0004177!3.48e-13!29;UBERON:0002370!4.94e-13!23;UBERON:0000974!4.94e-13!23;UBERON:0004807!4.94e-13!23;UBERON:0005058!4.94e-13!23;UBERON:0003351!4.94e-13!23;UBERON:0009113!4.94e-13!23;UBERON:0003295!4.94e-13!23;UBERON:0009722!4.94e-13!23;UBERON:0005562!4.94e-13!23;UBERON:0007690!4.94e-13!23;UBERON:0000072!1.98e-12!27;UBERON:0003133!2.48e-12!24;UBERON:0006562!3.40e-12!24;UBERON:0001557!3.40e-12!24;UBERON:0001042!3.40e-12!24;UBERON:0008814!3.40e-12!24;UBERON:0009145!3.40e-12!24;UBERON:0005156!7.57e-11!26;UBERON:0000990!7.57e-11!26;UBERON:0002193!2.26e-10!48;UBERON:0000991!3.96e-09!18;UBERON:0005564!3.96e-09!18;UBERON:0002390!6.00e-09!45;UBERON:0003061!6.00e-09!45;UBERON:0001004!1.95e-08!42;UBERON:0004176!2.91e-08!17;UBERON:0009196!2.91e-08!17;UBERON:0009117!2.91e-08!17;UBERON:0000063!6.13e-08!35;UBERON:0000473!7.03e-08!14;UBERON:0000065!8.45e-08!41;UBERON:0003135!4.10e-07!15 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003408,1.13e-27,24;UBERON:0002370,7.99e-26,23;UBERON:0000974,7.99e-26,23;UBERON:0004807,7.99e-26,23;UBERON:0005058,7.99e-26,23;UBERON:0003351,7.99e-26,23;UBERON:0009113,7.99e-26,23;UBERON:0003295,7.99e-26,23;UBERON:0009722,7.99e-26,23;UBERON:0005562,7.99e-26,23;UBERON:0007690,7.99e-26,23;UBERON:0006562,1.47e-24,24;UBERON:0001557,1.47e-24,24;UBERON:0001042,1.47e-24,24;UBERON:0008814,1.47e-24,24;UBERON:0009145,1.47e-24,24;UBERON:0000072,2.48e-21,27;UBERON:0004177,1.49e-19,29;UBERON:0005057,1.49e-19,29;UBERON:0000077,1.50e-19,35;UBERON:0007811,7.21e-17,36;UBERON:0003133,2.23e-15,24;UBERON:0005156,6.23e-14,26;UBERON:0000990,6.23e-14,26;UBERON:0001004,8.54e-14,42;UBERON:0000153,2.29e-13,43;UBERON:0000065,1.51e-12,41;UBERON:0000473,1.20e-11,14;UBERON:0000926,2.01e-11,120;UBERON:0004120,2.01e-11,120;UBERON:0006603,2.01e-11,120;UBERON:0002193,2.37e-11,48;UBERON:0002405,2.37e-11,48;UBERON:0002390,4.74e-11,45;UBERON:0003061,4.74e-11,45;UBERON:0000991,8.51e-11,18;UBERON:0005564,8.51e-11,18;UBERON:0003135,9.48e-11,15;UBERON:0003101,5.79e-10,16;UBERON:0000079,5.79e-10,16;UBERON:0004176,2.86e-09,17;UBERON:0009196,2.86e-09,17;UBERON:0009117,2.86e-09,17;UBERON:0005795,4.41e-09,4;UBERON:0000995,4.41e-09,4;UBERON:0000358,2.15e-08,3;UBERON:0000307,2.15e-08,3;UBERON:0007010,2.15e-08,3;UBERON:0003929,2.78e-08,55;UBERON:0002530,2.42e-07,65;UBERON:0002368,2.95e-07,60;UBERON:0003975,2.97e-07,5;UBERON:0001048,5.76e-07,134 | |||
|phase1_expression=0,0,0,0,0,0,0,5.16493293766305,49.9799963638417,34.875614421977,71.2266747818101,62.3818283343531,0.171200729931206,0,0,0.404950534779652,0,0.630924330716475,0,0.84877930359606,0.255129870453209,0,0,0.159992422793407,0.91763712426868,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.671130424230945,1.45072428402269,1.68046899571232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0.216491041011214,0.506719730950197,0,0.34255163915718,1.29468941823586,0,0.173485326766136,0,0,0,0.587943535678524,0,0,0,0,0,0,0,0,0,0,0,0.239630249011841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646703978798527,0.189106080167819,0.175951124163949,0,0,0,0,37.8165106955137,0,0.257347907114715,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06644125267617,1.16118335930219,0,0,0,0,0,0,0,0,0,1.79763881730844,0,0,0,0.114248512609729,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0,0.169745085775188,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.99358059645788,0.35613120733451,0,0,0,0.242780636154981,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0.18006109403131,0.388076051348264,0,0.354680467284547,0,0.164549020602121,0,55.8518665191631,1.27099242518292,0,0,0,0,0,0,0,0,0.170870880797853,0,0,0.188368457004691,0.27338845544205,0.457556346413045,0.169978429993855,0.419854356970974,0.276399947608848,0,0.474503990371703,0,0,0,0,0,0.0826534557253359,0.26175594198403,0,5.59205381778233,0.56369293868419,92.5507420012229,105.727975402085,96.4477894186476,55.0220848015135,27.7088045804876,10.2100797621806,2.0832701575032,4.92838918800841,1.69108884578204,0.576060012515731,3.47612232690996,3.04087822935246,3.59488350076895,5.84643703400078,6.08690765269437,3.17890167650024,2.40390899039938,1.77227432609493,1.31256384932592,1.98137697303,1.71404514732629,2.24153125701431,2.30908419936791,2.10378423926824,0,269.26896144274,216.120680572227,175.271539484098,0,39.9763672711018,8.79127796482872,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0.170733605754134,0.486213434136588,0.209613162627982,0,0.222246727801615,0,0.64183841918363,0,0.25347929989024,0.188626341386076,0,0.128050304809739,0.114870937911227,0,0,0,0,0,0,0,0,0.145346416632329,0.0941093804153306,0.0846146078916765,0,0,0,0.561142271657738,0,0.197008964751127,0,0.309873682371932,0,0,0,0.214871054048298,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,5.16493293766305,49.9799963638417,34.875614421977,71.2266747818101,62.3818283343531,0.171200729931206,0,0,0.404950534779652,0,0.630924330716475,0,0.84877930359606,0.255129870453209,0,0,0.159992422793407,0.91763712426868,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.671130424230945,1.45072428402269,1.68046899571232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0.216491041011214,0.506719730950197,0,0.34255163915718,1.29468941823586,0,0.173485326766136,0,0,0,0.587943535678524,0,0,0,0,0,0,0,0,0,0,0,0.239630249011841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646703978798527,0.189106080167819,0.175951124163949,0,0,0,0,37.8165106955137,0,0.257347907114715,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06644125267617,1.16118335930219,0,0,0,0,0,0,0,0,0,1.79763881730844,0,0,0,0.114248512609729,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0,0.169745085775188,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.99358059645788,0.35613120733451,0,0,0,0.242780636154981,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0.18006109403131,0.388076051348264,0,0.354680467284547,0,0.164549020602121,0,55.8518665191631,1.27099242518292,0,0,0,0,0,0,0,0,0.170870880797853,0,0,0.188368457004691,0.27338845544205,0.457556346413045,0.169978429993855,0.419854356970974,0.276399947608848,0,0.474503990371703,0,0,0,0,0,0.0826534557253359,0.26175594198403,0,5.59205381778233,0.56369293868419,92.5507420012229,105.727975402085,96.4477894186476,55.0220848015135,27.7088045804876,10.2100797621806,2.0832701575032,4.92838918800841,1.69108884578204,0.576060012515731,3.47612232690996,3.04087822935246,3.59488350076895,5.84643703400078,6.08690765269437,3.17890167650024,2.40390899039938,1.77227432609493,1.31256384932592,1.98137697303,1.71404514732629,2.24153125701431,2.30908419936791,2.10378423926824,0,269.26896144274,216.120680572227,175.271539484098,0,39.9763672711018,8.79127796482872,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0.170733605754134,0.486213434136588,0.209613162627982,0,0.222246727801615,0,0.64183841918363,0,0.25347929989024,0.188626341386076,0,0.128050304809739,0.114870937911227,0,0,0,0,0,0,0,0,0.145346416632329,0.0941093804153306,0.0846146078916765,0,0,0,0.561142271657738,0,0.197008964751127,0,0.309873682371932,0,0,0,0.214871054048298,0,0,0 | ||
|short_description=p1@Utf1 | |short_description=p1@Utf1 | ||
}} | }} |
Revision as of 02:27, 14 November 2012
Short description: | p1@Utf1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Utf1_5end |
Coexpression cluster: | MCL_coexpression_mm9:3606 |
Association with transcript: | 0bp_to_ENSMUST00000054778, NM_009482, uc009kgf.1_5end |
EntrezGene: | Utf1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 3.24e-11 | 9 |
alpha-beta T cell | 3.24e-11 | 9 |
immature T cell | 3.24e-11 | 9 |
mature T cell | 3.24e-11 | 9 |
immature alpha-beta T cell | 3.24e-11 | 9 |
CD4-positive, alpha-beta T cell | 1.00e-09 | 8 |
lymphocyte | 2.21e-09 | 13 |
common lymphoid progenitor | 2.21e-09 | 13 |
T cell | 5.67e-09 | 11 |
pro-T cell | 5.67e-09 | 11 |
extraembryonic cell | 2.15e-08 | 3 |
trophoblast cell | 2.15e-08 | 3 |
lymphoid lineage restricted progenitor cell | 3.92e-08 | 12 |
leukocyte | 7.55e-07 | 17 |
nongranular leukocyte | 7.55e-07 | 17 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.