FF:11316-117D2: Difference between revisions

Revision as of 14:54, 29 June 2012

Name:	Astrocyte - cerebral cortex, donor2
Species:	Human (Homo sapiens)
Library ID:	{{{library_id}}}
Sample type:	{{{sample_category}}}
Genomic View:	UCSC
CAGEd-oPOSSUM:	link

Additional information

Sample information

strain	NA
tissue	cerebral cortex
dev stage	fetus
sex	unknown
age	fetal
cell type	astrocyte
cell line	NA
company	Sciencell/3H
collaboration	FANTOM5 OSC CORE (contact: Al Forrest)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	1091
catalog number	SC1805
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0

Download raw sequence, BAM & CTSS

Hg19

BAM	CTSS
[{{{hg19bam}}} download]	[{{{hg19ctss}}} donwload]

Hg38

BAM	CTSS
[{{{hg38bam}}} download]	[{{{hg38ctss}}} donwload]

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	0.051
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	0.62
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0.0138
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0.105
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0.0125
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	-0.0444
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	0.0123
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0.0403
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0.105
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	0.169
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0.0557
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	0.242
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0.0557
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	0.659
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	-0.0101
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0.149
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	0.627
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0.475
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0.0557
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0.349
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0.26
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0.105
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0.0557
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data no result for this sample

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11960

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.00144
MA0003.1	MA0003.1	0.0553
MA0004.1	MA0004.1	0.138
MA0006.1	MA0006.1	0.617
MA0007.1	MA0007.1	0.323
MA0009.1	MA0009.1	0.175
MA0014.1	MA0014.1	0.691
MA0017.1	MA0017.1	0.00203
MA0018.2	MA0018.2	0.899
MA0019.1	MA0019.1	0.95
MA0024.1	MA0024.1	1.1598e-5
MA0025.1	MA0025.1	0.26
MA0027.1	MA0027.1	0.152
MA0028.1	MA0028.1	0.547
MA0029.1	MA0029.1	0.298
MA0030.1	MA0030.1	0.0432
MA0031.1	MA0031.1	0.00163
MA0035.2	MA0035.2	0.0415
MA0038.1	MA0038.1	2.09924e-4
MA0039.2	MA0039.2	0.69
MA0040.1	MA0040.1	0.0545
MA0041.1	MA0041.1	0.185
MA0042.1	MA0042.1	0.134
MA0043.1	MA0043.1	0.188
MA0046.1	MA0046.1	0.655
MA0047.2	MA0047.2	2.49518e-6
MA0048.1	MA0048.1	0.13
MA0050.1	MA0050.1	0.00248
MA0051.1	MA0051.1	0.0269
MA0052.1	MA0052.1	0.00329
MA0055.1	MA0055.1	0.364
MA0057.1	MA0057.1	0.41
MA0058.1	MA0058.1	0.0622
MA0059.1	MA0059.1	0.0713
MA0060.1	MA0060.1	2.22923e-12
MA0061.1	MA0061.1	0.00373
MA0062.2	MA0062.2	0.307
MA0065.2	MA0065.2	0.00203
MA0066.1	MA0066.1	0.101
MA0067.1	MA0067.1	0.274
MA0068.1	MA0068.1	3.44487e-4
MA0069.1	MA0069.1	0.888
MA0070.1	MA0070.1	0.0362
MA0071.1	MA0071.1	0.179
MA0072.1	MA0072.1	0.195
MA0073.1	MA0073.1	0.962
MA0074.1	MA0074.1	0.556
MA0076.1	MA0076.1	0.538
MA0077.1	MA0077.1	0.0521
MA0078.1	MA0078.1	0.899
MA0079.2	MA0079.2	0.646
MA0080.2	MA0080.2	3.73574e-15
MA0081.1	MA0081.1	0.0394
MA0083.1	MA0083.1	0.665
MA0084.1	MA0084.1	0.938
MA0087.1	MA0087.1	0.478
MA0088.1	MA0088.1	0.389
MA0090.1	MA0090.1	0.54
MA0091.1	MA0091.1	0.00781
MA0092.1	MA0092.1	0.329
MA0093.1	MA0093.1	0.141
MA0099.2	MA0099.2	2.16226e-5
MA0100.1	MA0100.1	0.432
MA0101.1	MA0101.1	0.0293
MA0102.2	MA0102.2	0.00552
MA0103.1	MA0103.1	0.038
MA0104.2	MA0104.2	0.134
MA0105.1	MA0105.1	1.04805e-4
MA0106.1	MA0106.1	0.121
MA0107.1	MA0107.1	0.00631
MA0108.2	MA0108.2	0.774
MA0111.1	MA0111.1	0.617
MA0112.2	MA0112.2	3.71629e-5
MA0113.1	MA0113.1	0.136
MA0114.1	MA0114.1	0.0381
MA0115.1	MA0115.1	0.875
MA0116.1	MA0116.1	6.7773e-4
MA0117.1	MA0117.1	0.663
MA0119.1	MA0119.1	0.373
MA0122.1	MA0122.1	0.679
MA0124.1	MA0124.1	0.742
MA0125.1	MA0125.1	0.0249
MA0131.1	MA0131.1	0.552
MA0135.1	MA0135.1	0.532
MA0136.1	MA0136.1	1.17798e-14
MA0137.2	MA0137.2	0.167
MA0138.2	MA0138.2	0.18
MA0139.1	MA0139.1	0.0876
MA0140.1	MA0140.1	0.024
MA0141.1	MA0141.1	0.0654
MA0142.1	MA0142.1	0.00376
MA0143.1	MA0143.1	0.0654
MA0144.1	MA0144.1	0.0404
MA0145.1	MA0145.1	0.198
MA0146.1	MA0146.1	0.147
MA0147.1	MA0147.1	0.125
MA0148.1	MA0148.1	2.04088e-4
MA0149.1	MA0149.1	0.0318
MA0150.1	MA0150.1	0.00145
MA0152.1	MA0152.1	0.203
MA0153.1	MA0153.1	0.765
MA0154.1	MA0154.1	0.00258
MA0155.1	MA0155.1	0.392
MA0156.1	MA0156.1	1.77455e-6
MA0157.1	MA0157.1	0.00402
MA0159.1	MA0159.1	0.00632
MA0160.1	MA0160.1	0.0233
MA0162.1	MA0162.1	0.556
MA0163.1	MA0163.1	1.84847e-6
MA0164.1	MA0164.1	0.88
MA0258.1	MA0258.1	0.00725
MA0259.1	MA0259.1	0.51

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11960

Novel motif	Logo	P-value
1	1	0.0953
10	10	0.15
100	100	0.938
101	101	0.726
102	102	0.763
103	103	0.106
104	104	0.501
105	105	0.504
106	106	0.0327
107	107	0.756
108	108	0.479
109	109	0.0212
11	11	0.0774
110	110	0.278
111	111	0.0569
112	112	0.0178
113	113	0.209
114	114	0.00601
115	115	0.504
116	116	0.928
117	117	0.207
118	118	0.336
119	119	0.213
12	12	0.536
120	120	0.863
121	121	0.804
122	122	0.25
123	123	0.543
124	124	0.283
125	125	0.89
126	126	0.14
127	127	0.112
128	128	0.308
129	129	0.124
13	13	0.321
130	130	0.154
131	131	0.8
132	132	0.842
133	133	0.701
134	134	0.868
135	135	0.0192
136	136	0.847
137	137	0.155
138	138	0.0614
139	139	0.00269
14	14	0.757
140	140	0.313
141	141	0.209
142	142	0.811
143	143	0.00401
144	144	0.906
145	145	0.699
146	146	0.609
147	147	0.872
148	148	0.0987
149	149	0.0953
15	15	0.101
150	150	0.532
151	151	0.262
152	152	0.0865
153	153	0.304
154	154	0.736
155	155	0.178
156	156	0.523
157	157	0.154
158	158	0.086
159	159	0.608
16	16	0.266
160	160	0.251
161	161	0.811
162	162	0.585
163	163	0.514
164	164	0.0652
165	165	0.369
166	166	0.407
167	167	0.854
168	168	0.473
169	169	0.00796
17	17	0.0921
18	18	0.0939
19	19	0.368
2	2	0.424
20	20	0.829
21	21	0.797
22	22	0.202
23	23	0.0542
24	24	0.527
25	25	0.451
26	26	0.531
27	27	0.152
28	28	0.868
29	29	0.253
3	3	0.0994
30	30	0.793
31	31	0.638
32	32	0.0837
33	33	0.533
34	34	0.553
35	35	0.313
36	36	0.0904
37	37	0.0438
38	38	0.186
39	39	0.851
4	4	0.605
40	40	0.165
41	41	0.186
42	42	0.279
43	43	0.102
44	44	0.471
45	45	0.406
46	46	0.1
47	47	0.215
48	48	0.26
49	49	0.0964
5	5	0.108
50	50	0.654
51	51	0.26
52	52	0.505
53	53	0.48
54	54	0.237
55	55	0.211
56	56	0.507
57	57	0.534
58	58	0.101
59	59	0.0866
6	6	0.944
60	60	0.0761
61	61	0.215
62	62	0.0642
63	63	0.216
64	64	0.433
65	65	0.0598
66	66	0.522
67	67	0.721
68	68	0.229
69	69	0.996
7	7	0.34
70	70	0.0147
71	71	0.0705
72	72	0.186
73	73	0.0622
74	74	0.679
75	75	0.0486
76	76	0.419
77	77	0.152
78	78	0.33
79	79	0.249
8	8	0.268
80	80	0.187
81	81	0.464
82	82	0.0181
83	83	0.934
84	84	0.437
85	85	0.0201
86	86	0.218
87	87	0.924
88	88	0.858
89	89	0.142
9	9	0.21
90	90	0.305
91	91	0.879
92	92	0.0254
93	93	0.014
94	94	0.0519
95	95	0.0637
96	96	0.172
97	97	0.519
98	98	0.243
99	99	0.708

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs11960

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0000194 human astrocyte of the cerebral cortex sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000333 (migratory neural crest cell)
0000055 (non-terminally differentiated cell)
0000548 (animal cell)
0002321 (embryonic cell)
0002371 (somatic cell)
0002319 (neural cell)
0000221 (ectodermal cell)
0000095 (neuron associated cell)
0000243 (glial cell (sensu Vertebrata))
0000128 (oligodendrocyte)
0000126 (macroglial cell)
0000219 (motile cell)
0000123 (neuron associated cell (sensu Vertebrata))
0000125 (glial cell)
0000030 (glioblast)
0000255 (eukaryotic cell)
0000127 (astrocyte)
0002453 (oligodendrocyte precursor cell)
0002605 (astrocyte of the cerebral cortex)
0000133 (neurectodermal cell)
0000339 (glioblast (sensu Vertebrata))

UBERON: Anatomy
0000468 (multi-cellular organism)
0000922 (embryo)
0000955 (brain)
0000483 (epithelium)
0000956 (cerebral cortex)
0000033 (head)
0000479 (tissue)
0002346 (neurectoderm)
0000064 (organ part)
0000073 (regional part of nervous system)
0004121 (ectoderm-derived structure)
0000062 (organ)
0004111 (anatomical conduit)
0000475 (organism subdivision)
0000025 (tube)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000480 (anatomical group)
0000923 (germ layer)
0002050 (embryonic structure)
0005423 (developing anatomical structure)
0000477 (anatomical cluster)
0002020 (gray matter)
0002791 (regional part of telencephalon)
0003528 (brain grey matter)
0000481 (multi-tissue structure)
0000467 (anatomical system)
0002616 (regional part of brain)
0001062 (anatomical entity)
0000119 (cell layer)
0005291 (embryonic tissue)
0002780 (regional part of forebrain)
0006598 (presumptive structure)
0002532 (epiblast (generic))
0001017 (central nervous system)
0001016 (nervous system)
0000153 (anterior region of body)
0007811 (craniocervical region)
0000924 (ectoderm)
0001869 (cerebral hemisphere)
0001893 (telencephalon)
0001890 (forebrain)
0000203 (pallium)
0003075 (neural plate)
0003056 (pre-chordal neural plate)
0001049 (neural tube)
0006238 (future brain)
0006601 (presumptive ectoderm)
0005068 (neural rod)
0006241 (future spinal cord)
0003080 (anterior neural tube)
0006240 (future forebrain)
0007284 (presumptive neural plate)
0007135 (neural keel)

FF: FANTOM5
NA

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
NA

@@ Line 6: / Line 6: @@
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 |creation_date=
+|datafreeze_phase=1
 |def=
 |expression_enrichment_score=chr3:181429704..181429722,+!p1@SOX2!2.13!134.68!SOX2;;chr14:29235961..29236008,+!p1@FOXG1!1.98!94.31!FOXG1;;chrX:25034067..25034088,-!p1@ARX!1.95!89.11!ARX;;chr14:33403881..33403924,+!p1@NPAS3!1.95!88.97!NPAS3;;chr2:105470562..105470582,+!p@chr2:105470562..105470582,+!1.92!81.99!POU3F3;;chr4:57547454..57547469,-!p1@HOPX!1.83!66.66!HOPX;;chr9:126774018..126774055,+!p1@LHX2!1.79!60.22!LHX2;;chr14:29236269..29236285,+!p3@FOXG1!1.72!51.33!FOXG1;;chr14:29234581..29234601,+!p2@FOXG1!1.70!48.86!FOXG1;;chr6:45296048..45296082,+!p1@RUNX2!1.67!52.29!RUNX2;;chr3:181429741..181429767,+!p2@SOX2!1.62!40.24!SOX2;;chr1:23696348..23696363,-!p4@ZNF436!1.58!41.06!ZNF436;;chr2:5832508..5832524,+!p1@SOX11!1.50!30.80!SOX11;;chr16:51185172..51185197,-!p1@SALL1!1.50!30.52!SALL1;;chr13:72441315..72441454,-!p1@DACH1!1.48!57.90!DACH1;;chr19:13134772..13134822,+!p2@NFIX!1.48!42.84!NFIX;;chr9:126773880..126773895,+!p2@LHX2!1.43!26.01!LHX2;;chr13:95364784..95364806,-!p1@SOX21!1.42!25.05!SOX21;;chr11:31832658..31832681,-!p1@PAX6!1.41!24.77!PAX6;;chr1:42384532..42384603,-!p2@HIVEP3!1.36!22.04!HIVEP3;;chrX:139587228..139587234,-!p1@SOX3!1.35!21.49!SOX3;;chr9:126774058..126774081,+!p3@LHX2!1.32!19.85!LHX2;;chr2:105470536..105470556,+!p@chr2:105470536..105470556,+!1.32!19.71!POU3F3;;chr11:31832862..31832884,-!p2@PAX6!1.32!19.71!PAX6;;chr14:73360799..73360817,-!p1@DPF3!1.31!66.79!DPF3;;chr2:63277948..63277974,+!p1@OTX1!1.30!18.89!OTX1;;chr20:55204351..55204377,+!p1@TFAP2C!1.26!21.90!TFAP2C;;chr1:2985760..2985774,+!p1@PRDM16!1.26!17.11!PRDM16;;chr11:31839488..31839515,-!p3@PAX6!1.20!14.78!PAX6;;chr9:4300050..4300118,-!p1@GLIS3!1.18!91.71!GLIS3;;chr7:42276787..42276815,-!p1@GLI3!1.15!35.18!GLI3;;chr13:72441074..72441172,-!p2@DACH1!1.15!13.14!DACH1;;chr10:119302232..119302265,+!p1@EMX2!1.14!12.73!EMX2;;chr15:37392724..37392757,-!p1@MEIS2!1.13!56.94!MEIS2;;chr1:50889103..50889145,-!p1@DMRTA2!1.13!12.59!DMRTA2;;chr11:31832807..31832823,-!p4@PAX6!1.13!12.46!PAX6;;chr8:80679993..80680011,-!p1@HEY1!1.12!17.52!HEY1;;chrX:82763292..82763317,+!p1@POU3F4!1.12!12.18!POU3F4;;chr1:23696308..23696339,-!p2@ZNF436!1.10!24.77!ZNF436;;chr14:33403648..33403710,+!p3@NPAS3!1.10!11.50!NPAS3;;chr6:99282438..99282457,+!p2@POU3F2!1.09!11.36!POU3F2;;chr6:108487289..108487302,+!p1@NR2E1!1.09!11.22!NR2E1;;chr5:176738887..176738934,-!p1@MXD3!1.08!73.91!MXD3;;chr6:99282475..99282501,+!p1@POU3F2!1.08!10.95!POU3F2;;chr18:53068911..53068935,-!p4@TCF4!1.06!11.77!TCF4;;chr1:170633348..170633399,+!p2@PRRX1!1.05!13.96!PRRX1;;chr15:80696703..80696754,+!p1@ARNT2!1.05!13.55!ARNT2;;chr6:99282592..99282616,+!p3@POU3F2!1.05!10.13!POU3F2;;chr14:33403779..33403793,+!p6@NPAS3!1.04!9.99!NPAS3;;chr17:70117153..70117174,+!p1@SOX9!1.01!96.22!SOX9;;chr16:51185318..51185348,-!p2@SALL1!1.01!9.17!SALL1;;chr12:24102576..24102623,-!p2@SOX5!1.01!9.17!SOX5;;chr15:37392094..37392116,-!p6@MEIS2!1.00!11.22!MEIS2;;chr14:29236301..29236317,+!p5@FOXG1!1.00!8.90!FOXG1;;chr15:57511609..57511651,+!p2@TCF12!0.98!14.65!TCF12;;chr2:5832493..5832507,+!p2@SOX11!0.98!8.62!SOX11;;chr2:63277978..63277995,+!p2@OTX1!0.98!8.49!OTX1;;chr1:151032922..151032951,+!p2@MLLT11!0.97!14.10!MLLT11;;chr13:100623375..100623425,-!p1@ZIC5!0.97!8.35!ZIC5;;chr2:239148671..239148686,-!p1@HES6!0.96!30.52!HES6;;chr19:38720294..38720348,-!p1@DPF1!0.96!10.27!DPF1;;chr13:95364761..95364780,-!p2@SOX21!0.96!8.21!SOX21;;chr4:57522598..57522664,-!p3@HOPX!0.96!8.08!HOPX;;chr6:34204921..34204939,+!p3@HMGA1!0.93!234.60!HMGA1;;chr6:19837592..19837621,+!p1@ID4!0.93!48.18!ID4;;chr14:33403860..33403874,+!p5@NPAS3!0.92!7.39!NPAS3;;chr2:223163706..223163730,-!p1@PAX3!0.92!7.25!PAX3;;chr17:46622205..46622218,-!p3@HOXB2!0.91!8.35!HOXB2;;chr16:52581025..52581072,-!p1@TOX3!0.91!7.12!TOX3;;chr9:14314131..14314147,-!p2@NFIB!0.90!40.65!NFIB;;chr7:42276822..42276895,-!p2@GLI3!0.90!21.63!GLI3;;chr5:92918919..92918942,+!p1@NR2F1!0.89!31.48!NR2F1;;chr20:55205825..55205847,+!p2@TFAP2C!0.89!6.84!TFAP2C;;chr3:114343768..114343822,-!p1@ZBTB20!0.88!30.52!ZBTB20;;chr8:60031619..60031676,-!p1@TOX!0.88!14.78!TOX;;chr15:37392576..37392589,-!p12@MEIS2!0.88!8.08!MEIS2;;chr14:29236169..29236216,+!p6@FOXG1!0.88!6.57!FOXG1;;chr8:60031682..60031710,-!p2@TOX!0.87!10.68!TOX;;chr4:57522166..57522260,-!p2@HOPX!0.87!7.39!HOPX;;chr3:21792682..21792720,-!p1@ZNF385D!0.87!6.43!ZNF385D;;chr7:100065686..100065701,-!p2@TSC22D4!0.86!6.30!TSC22D4;;chr16:30406423..30406447,+!p4@ZNF48!0.86!6.30!ZNF48;;chr1:170632285..170632309,+!p1@PRRX1!0.84!6.84!PRRX1;;chr1:170632477..170632506,+!p6@PRRX1!0.84!5.89!PRRX1;;chr10:119303078..119303169,+!p2@EMX2!0.84!5.89!EMX2;;chr3:181429641..181429650,+!p3@SOX2!0.84!5.89!SOX2;;chr12:2986206..2986258,-!p2@FOXM1!0.83!37.50!FOXM1;;chr12:24715376..24715432,-!p1@SOX5!0.83!7.39!SOX5;;chr14:57277178..57277203,-!p1@OTX2!0.83!5.75!OTX2;;chr3:147127142..147127168,+!p1@ZIC1!0.83!5.75!ZIC1;;chr19:13135582..13135600,+!p3@NFIX!0.83!5.75!NFIX;;chr6:108487220..108487236,+!p2@NR2E1!0.83!5.75!NR2E1;;chr1:8926441..8926473,-!p10@ENO1!0.82!8.76!ENO1;;chr2:25475120..25475176,-!p2@DNMT3A!0.82!7.66!DNMT3A;;chr2:105470614..105470625,+!p@chr2:105470614..105470625,+!0.82!5.61!POU3F3;;chr2:114036488..114036504,-!p1@PAX8!0.82!5.61!PAX8;;chr1:2985726..2985752,+!p2@PRDM16!0.82!5.61!PRDM16;;chr20:55205791..55205817,+!p3@TFAP2C!0.82!5.61!TFAP2C;;chr11:31832610..31832639,-!p5@PAX6!0.82!5.61!PAX6;;chr9:14314566..14314618,-!p1@NFIB!0.81!71.31!NFIB;;chr8:77593474..77593612,+!p1@ZFHX4!0.81!24.64!ZFHX4;;chr20:42295713..42295738,+!p2@MYBL2!0.80!34.22!MYBL2;;chr20:30433396..30433414,-!p1@FOXS1!0.80!5.34!FOXS1;;chr1:42384486..42384501,-!p6@HIVEP3!0.79!5.20!HIVEP3;;chr14:29237009..29237049,+!p4@FOXG1!0.79!5.20!FOXG1;;chr15:37392703..37392717,-!p8@MEIS2!0.78!7.39!MEIS2;;chr18:42260920..42260951,+!p4@SETBP1!0.78!5.06!SETBP1;;chr3:114173654..114173696,-!p12@ZBTB20!0.78!5.06!ZBTB20;;chr10:119302645..119302712,+!p3@EMX2!0.78!5.06!EMX2;;chr13:100634031..100634045,+!p1@ZIC2!0.78!5.06!ZIC2;;chr7:19157248..19157268,-!p1@TWIST1!0.77!14.65!TWIST1;;chr14:33408072..33408114,+!p2@NPAS3!0.77!5.89!NPAS3;;chr6:99283040..99283063,+!p5@POU3F2!0.77!4.93!POU3F2;;chr15:80696666..80696700,+!p4@ARNT2!0.77!4.93!ARNT2;;chr1:151032860..151032918,+!p1@MLLT11!0.76!63.10!MLLT11;;chr15:37390850..37390909,-!p3@MEIS2!0.76!9.99!MEIS2;;chr11:31827535..31827565,-!p11@PAX6!0.76!4.79!PAX6;;chr3:25469815..25469866,+!p3@RARB!0.76!4.79!RARB;;chr4:299227..299272,-!p1@ZNF732!0.76!4.79!ZNF732;;chr14:33403930..33403943,+!p7@NPAS3!0.75!4.65!NPAS3;;chr3:147111231..147111281,+!p3@ZIC1!0.74!4.52!ZIC1;;chr9:14083467..14083483,-!p4@NFIB!0.73!11.63!NFIB;;chr3:21792585..21792625,-!p2@ZNF385D!0.73!4.93!ZNF385D;;chr10:119302268..119302282,+!p4@EMX2!0.73!4.38!EMX2;;chr6:34204672..34204692,+!p1@HMGA1!0.72!534.91!HMGA1;;chr7:20826504..20826526,-!p1@SP8!0.72!4.24!SP8;;chr11:31832581..31832601,-!p7@PAX6!0.72!4.24!PAX6;;chr9:16705069..16705086,-!p3@BNC2!0.72!4.24!BNC2;;chr19:58545454..58545498,+!p1@ZSCAN1!0.72!4.24!ZSCAN1;;chr14:21994337..21994442,-!p1@SALL2!0.71!12.59!SALL2;;chr19:23299814..23299844,+!p1@ZNF730!0.71!5.20!ZNF730;;chr18:56532100..56532130,+!p1@ZNF532!0.70!7.94!ZNF532;;chr9:4299979..4299996,-!p3@GLIS3!0.70!6.98!GLIS3;;chr19:13136130..13136165,+!p6@NFIX!0.70!5.47!NFIX;;chrY:21906594..21906622,-!p1@KDM5D!0.70!3.97!KDM5D;;chr9:126774091..126774098,+!p4@LHX2!0.70!3.97!LHX2;;chr3:25470156..25470227,+!p2@RARB!0.70!3.97!RARB;;chr9:14082760..14082775,-!p6@NFIB!0.69!6.84!NFIB;;chrX:84499081..84499115,+!p2@ZNF711!0.69!6.02!ZNF711;;chr17:17726907..17726958,-!p2@SREBF1!0.68!26.69!SREBF1;;chr9:14314522..14314556,-!p3@NFIB!0.68!9.72!NFIB;;chr8:86089417..86089440,+!p2@E2F5!0.68!8.21!E2F5;;chr19:13134457..13134462,+!p5@NFIX!0.68!7.25!NFIX;;chr9:4300016..4300039,-!p2@GLIS3!0.68!6.98!GLIS3;;chr8:80680024..80680046,-!p2@HEY1!0.68!4.38!HEY1;;chr5:92918956..92918969,+!p4@NR2F1!0.68!4.24!NR2F1;;chr18:42260840..42260860,+!p2@SETBP1!0.68!3.83!SETBP1;;chr19:13106214..13106382,+!p1@NFIX!0.67!99.10!NFIX;;chr12:2986275..2986363,-!p1@FOXM1!0.67!42.43!FOXM1;;chr20:32274179..32274213,-!p1@E2F1!0.67!27.79!E2F1;;chr19:23433144..23433204,-!p1@ZNF724P!0.67!18.61!ZNF724P;;chr9:4299959..4299974,-!p4@GLIS3!0.67!6.16!GLIS3;;chr9:14313893..14313908,-!p7@NFIB!0.67!5.61!NFIB;;chr11:31832687..31832704,-!p6@PAX6!0.67!3.70!PAX6;;chr2:105470599..105470610,+!p@chr2:105470599..105470610,+!0.67!3.70!POU3F3;;chr3:147127177..147127194,+!p2@ZIC1!0.67!3.70!ZIC1;;chr1:164528616..164528660,+!p5@PBX1!0.66!7.94!PBX1;;chr5:178368186..178368238,+!p1@ZNF454!0.66!6.98!ZNF454;;chr9:14314106..14314119,-!p5@NFIB!0.66!6.98!NFIB;;chr3:52001396..52001425,-!p4@PCBP4!0.66!6.84!PCBP4;;chr19:22817119..22817145,+!p1@ZNF492!0.66!6.43!ZNF492;;chr1:247171316..247171336,-!p3@ZNF695!0.66!5.61!ZNF695;;chr15:37390482..37390572,-!p7@MEIS2!0.66!5.20!MEIS2;;chr19:58341656..58341694,+!p5@ZNF587!0.66!4.52!ZNF587;;chr1:164528687..164528711,+!p6@PBX1!0.66!4.24!PBX1;;chr9:77112244..77112262,+!p1@RORB!0.66!4.11!RORB;;chr1:170632439..170632465,+!p11@PRRX1!0.66!3.56!PRRX1;;chr6:99282570..99282591,+!p4@POU3F2!0.66!3.56!POU3F2;;chr19:13135731..13135787,+!p10@NFIX!0.66!3.56!NFIX;;chr2:121493425..121493474,+!p1@GLI2!0.65!8.35!GLI2;;chr16:29818199..29818216,+!p11@MAZ!0.65!6.16!MAZ;;chr7:6655225..6655279,+!p1@ENST00000457543!0.65!5.61!ZNF853;;chr19:13136241..13136258,+!p7@NFIX!0.65!4.93!NFIX;;chr8:60031809..60031835,-!p4@TOX!0.65!4.65!TOX;;chr11:62369806..62369837,-!p8@MTA2!0.65!4.65!MTA2;;chr11:31839453..31839462,-!p9@PAX6!0.65!3.42!PAX6;;chrX:82763265..82763283,+!p2@POU3F4!0.65!3.42!POU3F4;;chr1:151032957..151032968,+!p7@MLLT11!0.65!3.42!MLLT11;;chr4:57547751..57547764,-!p6@HOPX!0.65!3.42!HOPX;;chr20:42295745..42295765,+!p1@MYBL2!0.64!65.29!MYBL2;;chr19:45260775..45260838,+!p5@BCL3!0.64!4.65!BCL3;;chr17:41277372..41277418,-!p1@BRCA1!0.63!13.69!BRCA1;;chr12:106976774..106976788,+!p1@RFX4!0.63!3.28!RFX4;;chr13:112721457..112721482,+!p1@SOX1!0.63!3.28!SOX1;;chr8:30890810..30890880,-!p1@PURG!0.63!3.28!PURG;;chr1:47779762..47779827,-!p1@STIL,p1@TAL1!0.62!16.84!TAL1;;chr9:3525867..3525902,-!p3@RFX3!0.62!12.59!RFX3;;chr15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.9609262,-!p2@ZNF560!0.23!0.68!ZNF560;;chr1:164528942..164528964,+!p11@PBX1!0.23!0.68!PBX1;;chr1:170632137..170632172,+!p10@PRRX1!0.23!0.68!PRRX1;;chr1:170632325..170632339,+!p24@PRRX1!0.23!0.68!PRRX1;;chr1:170632647..170632659,+!p17@PRRX1!0.23!0.68!PRRX1;;chr1:170633194..170633205,+!p18@PRRX1!0.23!0.68!PRRX1;;chr1:44513995..44514031,+!p1@KLF17!0.23!0.68!KLF17;;chr1:52991933..52991947,-!p3@ZCCHC11!0.23!0.68!ZCCHC11;;chr1:61330997..61331017,+!p17@NFIA!0.23!0.68!NFIA;;chr20:45087928..45087965,-!p1@ENST00000400371,p1@uc002xry.2!0.23!0.68!ZNF663;;chr20:50418972..50419029,-!p1@SALL4!0.23!0.68!SALL4;;chr21:36260980..36261011,-!p1@RUNX1!0.22!43.12!RUNX1;;chr7:99156249..99156311,+!p1@ZNF655!0.22!33.67!ZNF655;;chr12:96588143..96588185,+!p1@ELK3!0.22!17.93!ELK3;;chr16:68573182..68573228,+!p1@ZFP90!0.22!14.10!ZFP90;;chr2:42795745..42795824,+!p1@MTA3!0.22!13.14!MTA3;;chr19:21950362..21950388,-!p1@ZNF100!0.22!13.00!ZNF100;;chr10:114710098..114710130,+!p2@TCF7L2!0.22!10.54!TCF7L2;;chr12:46123464..46123512,+!p1@ARID2!0.22!7.94!ARID2;;chr19:38146320..38146401,-!p1@ZFP30!0.22!7.53!ZFP30;;chr6:108882109..108882173,+!p2@FOXO3!0.22!7.39!FOXO3;;chr18:53257027..53257052,-!p3@TCF4!0.22!5.20!TCF4;;chr16:30569678..30569720,-!p1@ZNF764!0.22!4.52!ZNF764;;chr9:128509663..128509715,+!p1@PBX3!0.22!4.38!PBX3;;chr9:115818951..115819011,-!p1@ZFP37!0.22!3.83!ZFP37;;chr16:30538079..30538124,-!p3@ZNF768!0.22!3.56!ZNF768;;chr12:51566562..51566584,-!p2@TFCP2!0.22!3.42!TFCP2;;chr19:53662295..53662319,-!p1@ZNF347!0.22!3.01!ZNF347;;chr19:58920102..58920149,+!p2@ZNF584!0.22!3.01!ZNF584;;chr2:74229812..74229867,+!p1@TET3!0.22!3.01!TET3;;chr20:25677443..25677464,-!p2@ZNF337!0.22!2.74!ZNF337;;chr6:151712800..151712835,-!p2@ZBTB2!0.22!2.60!ZBTB2;;chr4:146402843..146402864,+!p3@SMAD1!0.22!2.19!SMAD1;;chr20:52210368..52210384,-!p1@ZNF217!0.22!2.05!ZNF217;;chr19:17356436..17356481,-!p3@NR2F6!0.22!1.78!NR2F6;;chr1:41157326..41157337,+!p5@NFYC!0.22!1.51!NFYC;;chr1:8483723..8483752,-!p12@RERE!0.22!1.51!RERE;;chr3:33482052..33482116,-!p2@UBP1!0.22!1.51!UBP1;;chr12:124827609..124827643,-!p9@NCOR2!0.22!1.37!NCOR2;;chr19:3366625..3366629,+!p4@NFIC!0.22!1.37!NFIC;;chr12:80084137..80084165,-!p10@PAWR!0.22!1.09!PAWR;;chr11:65686776..65686787,+!p9@DRAP1!0.22!0.96!DRAP1;;chr12:51611660..51611692,-!p5@POU6F1!0.22!0.82!POU6F1;;chr18:52989001..52989030,-!p10@TCF4!0.22!0.82!TCF4;;chr19:57019098..57019142,+!p3@ZNF471!0.22!0.82!ZNF471;;chr1:155829208..155829230,-!p3@GON4L!0.22!0.82!GON4L;;chrX:101187036..101187056,-!p2@ZMAT1!0.22!0.82!ZMAT1;;chr1:78444738..78444773,-!p1@FUBP1!0.21!158.50!FUBP1;;chr6:21593973..21593988,+!p1@SOX4!0.21!52.83!SOX4;;chr7:74072021..74072119,+!p1@GTF2I!0.21!37.64!GTF2I;;chr12:69753448..69753577,+!p1@YEATS4!0.21!28.47!YEATS4;;chr15:50647274..50647336,-!p1@GABPB1!0.21!9.58!GABPB1;;chr6:35227480..35227546,+!p1@ZNF76!0.21!9.03!ZNF76;;chr17:42298615..42298692,-!p2@UBTF!0.21!6.84!UBTF;;chr19:35264089..35264146,-!p1@ZNF599!0.21!6.71!ZNF599;;chr16:4366021..4366045,+!p@chr16:4366021..4366045,+!0.21!6.30!GLIS2;;chr9:99616768..99616819,-!p1@ZNF782!0.21!6.02!ZNF782;;chr22:50247449..50247515,+!p1@ZBED4!0.21!5.89!ZBED4;;chr19:20959098..20959117,+!p1@ZNF66P!0.21!5.34!ZNF66P;;chr3:114866084..114866118,-!p2@ZBTB20!0.21!4.52!ZBTB20;;chr7:28448965..28448994,+!p2@CREB5!0.21!4.38!CREB5;;chr18:72922743..72922761,+!p3@TSHZ1!0.21!4.11!TSHZ1;;chr19:53636125..53636178,-!p1@ZNF415!0.21!3.42!ZNF415;;chr1:61548069..61548102,+!p3@NFIA!0.21!2.74!NFIA;;

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FF:11316-117D2: Difference between revisions

From FANTOM5_SSTAR

Revision as of 14:54, 29 June 2012

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0