FFCP PHASE2:Hg19::chr1:154540296..154540327,+
From FANTOM5_SSTAR
Jump to: navigation, search
| Short description: | p1@CHRNB2 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_CHRNB2_5end |
| Coexpression cluster: | C1405_smallcell_pineal_small_occipital_somatostatinoma_medial_amygdala |
| Association with transcript: | 39bp_to_ENST00000368476, NM_000748, uc001ffg.2_5end |
| EntrezGene: | CHRNB2 |
| HGNC: | 1962 |
| UniProt: | P17787Q5SXY3 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@CHRNB2 |
|---|
0
5
10
15
20
25
30
35
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| neuronal stem cell | 1.85e-15 | 8 |
| neuron | 4.09e-12 | 6 |
| neuroblast | 4.09e-12 | 6 |
| electrically signaling cell | 4.09e-12 | 6 |
| neural cell | 1.03e-08 | 25 |
Showing 1 to 5 of 5 entries
| Ontology term | p-value | n |
|---|---|---|
| central nervous system | 5.21e-88 | 81 |
| nervous system | 4.91e-87 | 89 |
| neural tube | 9.31e-79 | 56 |
| neural rod | 9.31e-79 | 56 |
| future spinal cord | 9.31e-79 | 56 |
| neural keel | 9.31e-79 | 56 |
| regional part of nervous system | 3.90e-77 | 53 |
| regional part of brain | 3.90e-77 | 53 |
| brain | 6.36e-71 | 68 |
| future brain | 6.36e-71 | 68 |
Showing 1 to 10 of 74 entries
| Ontology term | p-value | n |
|---|---|---|
| neuroectodermal tumor | 1.16e-07 | 10 |
Showing 1 to 1 of 1 entries
