FFCP PHASE2:Hg19::chr16:77822511..77822522,+
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Short description: | p3@VAT1L |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_VAT1L_5end |
Coexpression cluster: | C3590_teratocarcinoma_medulla_putamen_locus_astrocytoma_retina_caudate |
Association with transcript: | 28bp_to_ENST00000302536, NM_020927, uc002ffg.1_5end |
EntrezGene: | VAT1L |
HGNC: | 29315 |
UniProt: | Q9HCJ6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p3@VAT1L |
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0.0
2.5
5.0
7.5
10.0
12.5
15.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
aortic smooth muscle cell | 9.98e-12 | 10 |
embryonic stem cell | 5.66e-08 | 5 |
neuronal stem cell | 2.81e-07 | 8 |
vascular associated smooth muscle cell | 3.21e-07 | 32 |
Showing 1 to 4 of 4 entries
Ontology term | p-value | n |
---|---|---|
central nervous system | 5.95e-42 | 81 |
nervous system | 2.96e-41 | 89 |
neural tube | 2.78e-36 | 56 |
neural rod | 2.78e-36 | 56 |
future spinal cord | 2.78e-36 | 56 |
neural keel | 2.78e-36 | 56 |
regional part of nervous system | 1.06e-30 | 53 |
regional part of brain | 1.06e-30 | 53 |
brain | 9.57e-30 | 68 |
future brain | 9.57e-30 | 68 |
Showing 1 to 10 of 86 entries