FFCP PHASE1:Mm9::chr13:72766038..72766055,-: Difference between revisions
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{{FFCP|EntrezGene=328287|HGNC=|MCL_coexpression_id=2871|UniProt=|association_with_transcript=-26bp_to_NR_030701,uc011zbn.1_5end|description=CAGE_peak_3_at_Gm20554_5end|id=chr13:72766038..72766055,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000120,4.01e-18,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005153!8.93e-10!17;UBERON:0005178!8.26e-08!17;UBERON:0005181!8.26e-08!17;UBERON:0002224!8.26e-08!17;UBERON:0000915!8.26e-08!17;UBERON:0008947!8.26e-08!17;UBERON:0003258!8.26e-08!17;UBERON:0002048!4.33e-07!14;UBERON:0000117!4.33e-07!14;UBERON:0000171!4.33e-07!14;UBERON:0000170!4.33e-07!14;UBERON:0005597!4.33e-07!14;UBERON:0000118!4.33e-07!14|ontology_enrichment_uberon_v019_2=UBERON:0000014,7.86e-19,5;UBERON:0001003,7.86e-19,5;UBERON:0002097,7.86e-19,5;UBERON:0002199,7.86e-19,5;UBERON:0007029,7.86e-19,5;UBERON:0007376,7.86e-19,5;UBERON:0002416,7.86e-19,5;UBERON:0007383,7.86e-19,5;UBERON:0001911,1.38e-13,2;UBERON:0000076,1.38e-13,2;UBERON:0005333,1.38e-13,2;UBERON:0008425,1.38e-13,2;UBERON:0005311,1.38e-13,2;UBERON:0010147,3.67e-13,2;UBERON:0003937,3.67e-13,2;UBERON:0005399,3.67e-13,2;UBERON:0000998,1.59e-07,1;UBERON:0007194,1.59e-07,1;UBERON:0006868,1.59e-07,1;UBERON:0002367,2.79e-07,1;UBERON:0009846,2.79e-07,1;UBERON:0003353,2.79e-07,1;UBERON:0004902,2.79e-07,1;UBERON:0003820,2.79e-07,1;UBERON:0009847,2.79e-07,1;UBERON:0000080,4.85e-07,4;UBERON:0005904,4.85e-07,4;UBERON:0006947,4.85e-07,4;UBERON:0002120,4.85e-07,4;UBERON:0004054,4.85e-07,4;UBERON:0004875,4.85e-07,4;UBERON:0004876,4.85e-07,4;UBERON:0005721,4.85e-07,4;UBERON:0005754,4.85e-07,4;UBERON:0007297,4.85e-07,4|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.405507724878058,0,0,0,0,0.194429899074283,0.419959264876088,0,0,0,0,0,0,0,1.21389876515759,1.5869729378161,2.53532561402472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0.153606533256243,0.923204014111357,0.640413505216868,0,0.837548997004143,0,0.30559649555362,0.294628585473668,0,0,0,0,0,0,0,0,0,0,0,0.170430322578058,0,0.70667914902068,0.422530259330042,0,0,0,0.649473123033642,1.52015919285059,0,0,0,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0.299581278809645,0,0,0,0,0.62336413367868,0.324482526135515,0.203678727700633,0.124406970610093,1.76905930903572,0,0.130120442962704,0,0.360124259610698,0.30140963567143,0.204109497453984,0.2562274405697,0.187403449119458,0,0,0.189106080167819,0,0.876782929710299,0.278047249225598,0.348252166522167,0.411564272815887,0,0,0,0,0.207125772535502,0,0,0.710234206755631,0,0.154267112887378,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228497025219458,0,0,0.193952487167626,0.0701358198903186,0.126473074248515,0,0.941992367048249,0.493588655687202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.739012760666419,0.37898282354097,0.651859905768103,0.169745085775188,0,0.837531287209079,0.238043640886014,0.975668239288994,0.472905432318573,0.664394068946325,0.159454768657487,0.491589944147214,0.345369963731791,0.144649058581512,0,0,4.91764273019036,4.96686143348518,0.321101179975584,0.468846746368813,0.163934945376675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780636154981,0,0.377210159511796,0.590603785761546,0.307435147943927,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0.329098041204242,0,0.23467170806371,0,1.7642271844397,0.98931751764888,2.42196640043858,1.44751019827574,1.55184047204077,1.47726809770555,0,0.18542530201051,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0.269728692769641,0.330613822901344,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0.538283139656854,0.335769232728157,0.19318959403219,0,0,0,3.00943262421218,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0.399024873401031,0.170733605754134,0.729320151204882,0.419226325255965,0,0.44449345560323,0.824140228955577,0.962757628775446,0.505394423527595,0.25347929989024,0.377252682772152,0.37456602987953,0.192075457214608,0.17230640686684,0.476293691283074,0.231768651889711,0.192909220463705,0,0.294397840268795,0,0.532427418478012,0,0.726732083161643,0.564656282491984,0.507687647350059,0,0.526139422875686,0.135804113845862,1.68342681497322,0.593175090620871,0.394017929502254,0.409231043169689,0.309873682371932,1.35034627686799,0,0.701794825336225,0.859484216193193,0.191288332068843,0.441182838239031,0|short_description=p3@Gm20554}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:328287 | |||
|HGNC= | |||
|MCL_coexpression_id=2871 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-26bp_to_NR_030701,uc011zbn.1_5end | |||
|cluster_id=chr13:72766038..72766055,- | |||
|description=CAGE_peak_3_at_Gm20554_5end | |||
|id=chr13:72766038..72766055,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000120,4.01e-18,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005153!8.93e-10!17;UBERON:0005178!8.26e-08!17;UBERON:0005181!8.26e-08!17;UBERON:0002224!8.26e-08!17;UBERON:0000915!8.26e-08!17;UBERON:0008947!8.26e-08!17;UBERON:0003258!8.26e-08!17;UBERON:0002048!4.33e-07!14;UBERON:0000117!4.33e-07!14;UBERON:0000171!4.33e-07!14;UBERON:0000170!4.33e-07!14;UBERON:0005597!4.33e-07!14;UBERON:0000118!4.33e-07!14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000014,7.86e-19,5;UBERON:0001003,7.86e-19,5;UBERON:0002097,7.86e-19,5;UBERON:0002199,7.86e-19,5;UBERON:0007029,7.86e-19,5;UBERON:0007376,7.86e-19,5;UBERON:0002416,7.86e-19,5;UBERON:0007383,7.86e-19,5;UBERON:0001911,1.38e-13,2;UBERON:0000076,1.38e-13,2;UBERON:0005333,1.38e-13,2;UBERON:0008425,1.38e-13,2;UBERON:0005311,1.38e-13,2;UBERON:0010147,3.67e-13,2;UBERON:0003937,3.67e-13,2;UBERON:0005399,3.67e-13,2;UBERON:0000998,1.59e-07,1;UBERON:0007194,1.59e-07,1;UBERON:0006868,1.59e-07,1;UBERON:0002367,2.79e-07,1;UBERON:0009846,2.79e-07,1;UBERON:0003353,2.79e-07,1;UBERON:0004902,2.79e-07,1;UBERON:0003820,2.79e-07,1;UBERON:0009847,2.79e-07,1;UBERON:0000080,4.85e-07,4;UBERON:0005904,4.85e-07,4;UBERON:0006947,4.85e-07,4;UBERON:0002120,4.85e-07,4;UBERON:0004054,4.85e-07,4;UBERON:0004875,4.85e-07,4;UBERON:0004876,4.85e-07,4;UBERON:0005721,4.85e-07,4;UBERON:0005754,4.85e-07,4;UBERON:0007297,4.85e-07,4 | |||
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.405507724878058,0,0,0,0,0.194429899074283,0.419959264876088,0,0,0,0,0,0,0,1.21389876515759,1.5869729378161,2.53532561402472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0.153606533256243,0.923204014111357,0.640413505216868,0,0.837548997004143,0,0.30559649555362,0.294628585473668,0,0,0,0,0,0,0,0,0,0,0,0.170430322578058,0,0.70667914902068,0.422530259330042,0,0,0,0.649473123033642,1.52015919285059,0,0,0,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0.299581278809645,0,0,0,0,0.62336413367868,0.324482526135515,0.203678727700633,0.124406970610093,1.76905930903572,0,0.130120442962704,0,0.360124259610698,0.30140963567143,0.204109497453984,0.2562274405697,0.187403449119458,0,0,0.189106080167819,0,0.876782929710299,0.278047249225598,0.348252166522167,0.411564272815887,0,0,0,0,0.207125772535502,0,0,0.710234206755631,0,0.154267112887378,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228497025219458,0,0,0.193952487167626,0.0701358198903186,0.126473074248515,0,0.941992367048249,0.493588655687202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.739012760666419,0.37898282354097,0.651859905768103,0.169745085775188,0,0.837531287209079,0.238043640886014,0.975668239288994,0.472905432318573,0.664394068946325,0.159454768657487,0.491589944147214,0.345369963731791,0.144649058581512,0,0,4.91764273019036,4.96686143348518,0.321101179975584,0.468846746368813,0.163934945376675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780636154981,0,0.377210159511796,0.590603785761546,0.307435147943927,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0.329098041204242,0,0.23467170806371,0,1.7642271844397,0.98931751764888,2.42196640043858,1.44751019827574,1.55184047204077,1.47726809770555,0,0.18542530201051,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0.269728692769641,0.330613822901344,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0.538283139656854,0.335769232728157,0.19318959403219,0,0,0,3.00943262421218,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0.399024873401031,0.170733605754134,0.729320151204882,0.419226325255965,0,0.44449345560323,0.824140228955577,0.962757628775446,0.505394423527595,0.25347929989024,0.377252682772152,0.37456602987953,0.192075457214608,0.17230640686684,0.476293691283074,0.231768651889711,0.192909220463705,0,0.294397840268795,0,0.532427418478012,0,0.726732083161643,0.564656282491984,0.507687647350059,0,0.526139422875686,0.135804113845862,1.68342681497322,0.593175090620871,0.394017929502254,0.409231043169689,0.309873682371932,1.35034627686799,0,0.701794825336225,0.859484216193193,0.191288332068843,0.441182838239031,0 | |||
|short_description=p3@Gm20554 | |||
}} |
Revision as of 07:26, 6 August 2015
Short description: | p3@Gm20554 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Gm20554_5end |
Coexpression cluster: | MCL_coexpression_mm9:2871 |
Association with transcript: | -26bp_to_NR_030701, uc011zbn.1_5end |
EntrezGene: | 328287 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granule cell | 4.01e-18 | 3 |
Ontology term | p-value | n |
---|---|---|
zone of skin | 7.86e-19 | 5 |
skin epidermis | 7.86e-19 | 5 |
skin of body | 7.86e-19 | 5 |
integument | 7.86e-19 | 5 |
surface | 7.86e-19 | 5 |
outer epithelium | 7.86e-19 | 5 |
integumental system | 7.86e-19 | 5 |
enveloping layer of ectoderm | 7.86e-19 | 5 |
mammary gland | 1.38e-13 | 2 |
external ectoderm | 1.38e-13 | 2 |
mammary bud | 1.38e-13 | 2 |
mammary ridge | 1.38e-13 | 2 |
mammary placode | 1.38e-13 | 2 |
male accessory sex gland | 3.67e-13 | 2 |
sex gland | 3.67e-13 | 2 |
male reproductive gland | 3.67e-13 | 2 |
seminal vesicle | 1.59e-07 | 1 |
vesicular gland | 1.59e-07 | 1 |
seminal fluid secreting gland | 1.59e-07 | 1 |
prostate gland | 2.79e-07 | 1 |
embryonic cloacal epithelium | 2.79e-07 | 1 |
epithelium of hindgut | 2.79e-07 | 1 |
urogenital sinus epithelium | 2.79e-07 | 1 |
prostate bud | 2.79e-07 | 1 |
prostate field | 2.79e-07 | 1 |
mesonephros | 4.85e-07 | 4 |
duct of male reproductive system | 4.85e-07 | 4 |
male genital duct | 4.85e-07 | 4 |
pronephros | 4.85e-07 | 4 |
internal male genitalia | 4.85e-07 | 4 |
nephrogenic cord | 4.85e-07 | 4 |
urogenital ridge | 4.85e-07 | 4 |
pronephric mesoderm | 4.85e-07 | 4 |
rostral part of nephrogenic cord | 4.85e-07 | 4 |
presumptive pronephric mesoderm | 4.85e-07 | 4 |