FFCP PHASE1:Mm9::chr11:58195835..58195850,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=314|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:58195835..58195850,+|id=chr11:58195835..58195850,+|ontology_enrichment_celltype=CL:0002563!1.08e-09!9;CL:0002251!1.08e-09!9;CL:0000239!3.74e-07!6;CL:0000677!3.74e-07!6;CL:0000212!3.74e-07!6;CL:0000584!3.74e-07!6|ontology_enrichment_celltype_v019_2=CL:0002563,6.18e-15,9;CL:0002251,6.18e-15,9;CL:0000239,9.04e-11,6;CL:0000677,9.04e-11,6;CL:0000584,9.04e-11,6;CL:0000075,3.95e-09,7;CL:0002076,2.69e-08,15;CL:0000066,3.48e-08,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!1.16e-23!59;UBERON:0000160!1.14e-21!43;UBERON:0000344!1.19e-16!15;UBERON:0001242!2.33e-14!13;UBERON:0000060!2.33e-14!13;UBERON:0001262!2.33e-14!13;UBERON:0004786!2.33e-14!13;UBERON:0004923!7.04e-10!24;UBERON:0003350!1.08e-09!9;UBERON:0004808!1.08e-09!9;UBERON:0001277!1.08e-09!9;UBERON:0000485!1.67e-07!11;UBERON:0001007!1.97e-07!128;UBERON:0001555!1.97e-07!128;UBERON:0007026!1.97e-07!128;UBERON:0004119!3.94e-07!130;UBERON:0000925!3.94e-07!130;UBERON:0006595!3.94e-07!130|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.96e-49,31;UBERON:0005409,2.72e-48,47;UBERON:0000344,2.09e-26,15;UBERON:0001242,1.27e-22,13;UBERON:0001262,1.27e-22,13;UBERON:0004786,1.27e-22,13;UBERON:0004923,3.99e-17,24;UBERON:0001007,7.40e-17,116;UBERON:0001555,7.40e-17,116;UBERON:0007026,7.40e-17,116;UBERON:0004119,2.03e-16,118;UBERON:0000925,2.03e-16,118;UBERON:0006595,2.03e-16,118;UBERON:0003350,6.18e-15,9;UBERON:0004808,6.18e-15,9;UBERON:0001277,6.18e-15,9;UBERON:0004921,8.85e-15,114;UBERON:0000485,6.50e-12,11;UBERON:0002108,4.61e-09,4;UBERON:0000331,1.83e-07,3;UBERON:0002116,1.83e-07,3;UBERON:0001204,1.83e-07,3;UBERON:0001168,1.83e-07,3|phase1_expression=0,6.2815573375085,6.82498859084304,7.56160528267075,10.0179145989269,6.88305014838748,9.34450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,12.1594241322989,18.1233332043064,8.6134794617253,8.61523992318149,11.8509177977239,31.9239344686708,11.8454160987167,29.0466968958449,0,0,0,4.91047753577167,6.31691652362271,3.87921776898501,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24711072210803,0,0,0,0,0,0,0,0,0,0,6.16592950482924,0,0,0,0,0,0,0,0,1.73036477414062,0,0,0,0,0,31.6865994070808,0,0,13.5392239260553,0,0,0,0,0,0,0,0,0,0,0,2.86136032403214,29.0631172198726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.8950761874167,8.72686869989696,0,0.696710015581316,5.15469845288373,10.8909103296605,8.2279876222602,11.223311940641,14.2358718463353,10.2113351928887,21.8661631656234,18.9008648439093,19.6913727990311,23.3693046250098,26.3688420847127,27.0832131625939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55056975900933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328281799490123,8.74442509889552,0,0,0,0,0,0,0,0,0,0,12.4107180341965,0,0,0.756037385752609,1.46361807210128,3.71216358368502,7.95699643670442,6.11635572367486,9.6849698534091,91.1193262241304,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0,0,0,0,0,0.292373642219257,0,0,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.729320151204882,0,0,0.44449345560323,0.618105171716683,0.320919209591815,0.252697211763798,0.25347929989024,0.943131706930381,0.468207537349412,0.384150914429216,0.631790158511746,0.476293691283074,0.695305955669133,0.38581844092741,0.412085900803307,0.735994600671987,0.685738504770831,0.532427418478012,0.953744759789284,0.436039249896986,0.470546902076653,0.507687647350059,0,0.526139422875686,0.679020569229309,0,0.711810108745045,0.29551344712669,0,0.619747364743864,0.192906610981141,0,0.467863216890817,0.429742108096597,0.382576664137687,0.441182838239031,0|short_description=p@chr11:58195835..58195850,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=314 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:58195835..58195850,+ | |||
|description=CAGE_peak_at_chr11:58195835..58195850,+ | |||
|id=chr11:58195835..58195850,+ | |||
|ontology_enrichment_celltype=CL:0002563!1.08e-09!9;CL:0002251!1.08e-09!9;CL:0000239!3.74e-07!6;CL:0000677!3.74e-07!6;CL:0000212!3.74e-07!6;CL:0000584!3.74e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,6.18e-15,9;CL:0002251,6.18e-15,9;CL:0000239,9.04e-11,6;CL:0000677,9.04e-11,6;CL:0000584,9.04e-11,6;CL:0000075,3.95e-09,7;CL:0002076,2.69e-08,15;CL:0000066,3.48e-08,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.16e-23!59;UBERON:0000160!1.14e-21!43;UBERON:0000344!1.19e-16!15;UBERON:0001242!2.33e-14!13;UBERON:0000060!2.33e-14!13;UBERON:0001262!2.33e-14!13;UBERON:0004786!2.33e-14!13;UBERON:0004923!7.04e-10!24;UBERON:0003350!1.08e-09!9;UBERON:0004808!1.08e-09!9;UBERON:0001277!1.08e-09!9;UBERON:0000485!1.67e-07!11;UBERON:0001007!1.97e-07!128;UBERON:0001555!1.97e-07!128;UBERON:0007026!1.97e-07!128;UBERON:0004119!3.94e-07!130;UBERON:0000925!3.94e-07!130;UBERON:0006595!3.94e-07!130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.96e-49,31;UBERON:0005409,2.72e-48,47;UBERON:0000344,2.09e-26,15;UBERON:0001242,1.27e-22,13;UBERON:0001262,1.27e-22,13;UBERON:0004786,1.27e-22,13;UBERON:0004923,3.99e-17,24;UBERON:0001007,7.40e-17,116;UBERON:0001555,7.40e-17,116;UBERON:0007026,7.40e-17,116;UBERON:0004119,2.03e-16,118;UBERON:0000925,2.03e-16,118;UBERON:0006595,2.03e-16,118;UBERON:0003350,6.18e-15,9;UBERON:0004808,6.18e-15,9;UBERON:0001277,6.18e-15,9;UBERON:0004921,8.85e-15,114;UBERON:0000485,6.50e-12,11;UBERON:0002108,4.61e-09,4;UBERON:0000331,1.83e-07,3;UBERON:0002116,1.83e-07,3;UBERON:0001204,1.83e-07,3;UBERON:0001168,1.83e-07,3 | |||
|phase1_expression=0,6.2815573375085,6.82498859084304,7.56160528267075,10.0179145989269,6.88305014838748,9.34450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,12.1594241322989,18.1233332043064,8.6134794617253,8.61523992318149,11.8509177977239,31.9239344686708,11.8454160987167,29.0466968958449,0,0,0,4.91047753577167,6.31691652362271,3.87921776898501,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24711072210803,0,0,0,0,0,0,0,0,0,0,6.16592950482924,0,0,0,0,0,0,0,0,1.73036477414062,0,0,0,0,0,31.6865994070808,0,0,13.5392239260553,0,0,0,0,0,0,0,0,0,0,0,2.86136032403214,29.0631172198726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.8950761874167,8.72686869989696,0,0.696710015581316,5.15469845288373,10.8909103296605,8.2279876222602,11.223311940641,14.2358718463353,10.2113351928887,21.8661631656234,18.9008648439093,19.6913727990311,23.3693046250098,26.3688420847127,27.0832131625939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55056975900933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328281799490123,8.74442509889552,0,0,0,0,0,0,0,0,0,0,12.4107180341965,0,0,0.756037385752609,1.46361807210128,3.71216358368502,7.95699643670442,6.11635572367486,9.6849698534091,91.1193262241304,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0,0,0,0,0,0.292373642219257,0,0,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.729320151204882,0,0,0.44449345560323,0.618105171716683,0.320919209591815,0.252697211763798,0.25347929989024,0.943131706930381,0.468207537349412,0.384150914429216,0.631790158511746,0.476293691283074,0.695305955669133,0.38581844092741,0.412085900803307,0.735994600671987,0.685738504770831,0.532427418478012,0.953744759789284,0.436039249896986,0.470546902076653,0.507687647350059,0,0.526139422875686,0.679020569229309,0,0.711810108745045,0.29551344712669,0,0.619747364743864,0.192906610981141,0,0.467863216890817,0.429742108096597,0.382576664137687,0.441182838239031,0 | |||
|short_description=p@chr11:58195835..58195850,+ | |||
}} |
Latest revision as of 04:07, 6 August 2015
Short description: | p@chr11:58195835..58195850, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:58195835..58195850, + |
Coexpression cluster: | MCL_coexpression_mm9:314 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 6.18e-15 | 9 |
epithelial cell of alimentary canal | 6.18e-15 | 9 |
brush border epithelial cell | 9.04e-11 | 6 |
gut absorptive cell | 9.04e-11 | 6 |
enterocyte | 9.04e-11 | 6 |
columnar/cuboidal epithelial cell | 3.95e-09 | 7 |
endo-epithelial cell | 2.69e-08 | 15 |
epithelial cell | 3.48e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.96e-49 | 31 |
gastrointestinal system | 2.72e-48 | 47 |
mucosa | 2.09e-26 | 15 |
intestinal mucosa | 1.27e-22 | 13 |
wall of intestine | 1.27e-22 | 13 |
gastrointestinal system mucosa | 1.27e-22 | 13 |
organ component layer | 3.99e-17 | 24 |
digestive system | 7.40e-17 | 116 |
digestive tract | 7.40e-17 | 116 |
primitive gut | 7.40e-17 | 116 |
endoderm-derived structure | 2.03e-16 | 118 |
endoderm | 2.03e-16 | 118 |
presumptive endoderm | 2.03e-16 | 118 |
epithelium of mucosa | 6.18e-15 | 9 |
gastrointestinal system epithelium | 6.18e-15 | 9 |
intestinal epithelium | 6.18e-15 | 9 |
subdivision of digestive tract | 8.85e-15 | 114 |
simple columnar epithelium | 6.50e-12 | 11 |
small intestine | 4.61e-09 | 4 |
ileal mucosa | 1.83e-07 | 3 |
ileum | 1.83e-07 | 3 |
mucosa of small intestine | 1.83e-07 | 3 |
wall of small intestine | 1.83e-07 | 3 |