FFCP PHASE1:Mm9::chrX:136343134..136343167,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=510|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chrX:136343134..136343167,+|id=chrX:136343134..136343167,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!6.62e-18!43;UBERON:0005409!1.15e-15!59;UBERON:0002113!8.73e-11!14;UBERON:0003918!8.73e-11!14;UBERON:0005095!8.73e-11!14;UBERON:0007687!8.73e-11!14;UBERON:0000344!6.08e-10!15;UBERON:0004119!6.52e-10!130;UBERON:0000925!6.52e-10!130;UBERON:0006595!6.52e-10!130;UBERON:0001007!2.11e-09!128;UBERON:0001555!2.11e-09!128;UBERON:0007026!2.11e-09!128;UBERON:0006554!9.58e-09!16;UBERON:0001242!1.06e-08!13;UBERON:0000060!1.06e-08!13;UBERON:0001262!1.06e-08!13;UBERON:0004786!1.06e-08!13;UBERON:0004921!1.43e-08!126;UBERON:0004185!1.43e-08!126;UBERON:0001008!6.42e-08!17;UBERON:0005172!2.75e-07!49;UBERON:0005173!2.75e-07!49;UBERON:0002417!2.75e-07!49;UBERON:0000916!2.75e-07!49;UBERON:0004923!7.91e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.78e-23,31;UBERON:0005409,2.29e-18,47;UBERON:0000344,8.00e-11,15;UBERON:0001007,2.51e-10,116;UBERON:0001555,2.51e-10,116;UBERON:0007026,2.51e-10,116;UBERON:0002113,2.67e-10,14;UBERON:0003918,2.67e-10,14;UBERON:0011143,2.67e-10,14;UBERON:0005095,2.67e-10,14;UBERON:0007687,2.67e-10,14;UBERON:0004119,5.74e-10,118;UBERON:0000925,5.74e-10,118;UBERON:0006595,5.74e-10,118;UBERON:0004921,3.61e-09,114;UBERON:0001242,6.88e-09,13;UBERON:0001262,6.88e-09,13;UBERON:0004786,6.88e-09,13;UBERON:0006554,2.05e-07,18;UBERON:0004923,4.93e-07,24;UBERON:0001008,6.89e-07,19|phase1_expression=0,1.04692622291808,0.454999239389536,0.30246421130683,2.00358291978539,0.839396359559449,1.86890112476421,0,0,0,0,0,0,0,0,0,0,0,0,0,6.88850650223665,0,0,4.15980299262857,2.52350209173887,1.14846392823004,1.29228598847722,1.29282739611533,11.4014051673824,4.53654233567875,5.32153225572731,0,0,0,8.08784535303569,6.15068187826422,7.35009682544529,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0.194429899074283,0,0,0,0,0,0,0.286533439938757,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56276261003168,0,0,0,0,0,0,1.15945795480671,0,4.0798280022465,1.61910957491345,1.29955283489534,0.896053774194671,4.49422144421606,0,0,0,0,0,0,0,0,0,0,7.4219521817389,0,0,0,0.304465478312141,0,0,0.117588707135705,0,48.6974086436717,0,0,0,0,0,3.72783522436244,0,0,3.32094171771169,0,0,0,0,0,0,0,0,0,0,0.712875546952214,23.1396965334773,108.923508884914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32167513193519,5.28901133327089,0.213288250535234,0,0.77320476793256,3.42861991859682,3.7804267453628,7.03834816616469,1.89811624617805,13.6700132420929,13.5721012752146,14.1259095149217,13.2575579241002,5.39291645192533,5.61958929674205,7.56736838366595,0.379335801906163,0.456994050438915,5.63538678365402,4.68398054044223,6.20647958936402,10.8710520829994,19.6033265085198,35.2788253671249,41.9186603336471,31.9598654557463,0.889357881261447,0,0,0,0,0.241177159752417,0,0,0.324270453550071,2.74561413188081,2.87536413054709,1.48856379067401,3.12037673114561,1.76805214562978,2.87035861635059,0.482443521363367,0.369506380333209,0,0,0,0,0,0,0.390267295715598,0.157635144106191,0.44292937929755,0,0,0,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0.851640511249612,0.534196811001766,0.162886959353576,1.48473110675282,0,0,0.302323556964751,0.188605079755898,0.590603785761546,1.22974059177571,4.39328098385976,2.18120237686503,1.06949213515416,0,0,0,0,0,0,0,0,0,0,0,0.704015124191131,0.21183207086382,0,0,0,0,0,0,8.16146342563582,0,0,0,0,0,0,0,0,0,0,5.72802370809068,0,0,0.972048067396211,0,1.09181281873089,0.269728692769641,0.578574190077352,1.04702376793612,9.20266310371729,0,0,0,0.165458490457098,0,0.129159823477731,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,3.85441652145859,0,0,0,0,0.187682475451182,4.02933573387983,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0.44449345560323,0.206035057238894,1.28367683836726,0,0.760437899670719,0.188626341386076,0.655490552289177,0.320125762024346,0.516919220600519,0.476293691283074,0.231768651889711,0.192909220463705,0.412085900803307,0.147198920134397,0.342869252385415,0.532427418478012,0,0.290692833264657,0.188218760830661,0.507687647350059,0.182927972872773,0,0.679020569229309,0,0.237270036248348,0.591026894253381,0.409231043169689,0.464810523557898,0.192906610981141,0,1.16965804222704,1.07435527024149,0,0.220591419119515,0|short_description=p@chrX:136343134..136343167,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=510 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chrX:136343134..136343167,+ | |||
|description=CAGE_peak_at_chrX:136343134..136343167,+ | |||
|id=chrX:136343134..136343167,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!6.62e-18!43;UBERON:0005409!1.15e-15!59;UBERON:0002113!8.73e-11!14;UBERON:0003918!8.73e-11!14;UBERON:0005095!8.73e-11!14;UBERON:0007687!8.73e-11!14;UBERON:0000344!6.08e-10!15;UBERON:0004119!6.52e-10!130;UBERON:0000925!6.52e-10!130;UBERON:0006595!6.52e-10!130;UBERON:0001007!2.11e-09!128;UBERON:0001555!2.11e-09!128;UBERON:0007026!2.11e-09!128;UBERON:0006554!9.58e-09!16;UBERON:0001242!1.06e-08!13;UBERON:0000060!1.06e-08!13;UBERON:0001262!1.06e-08!13;UBERON:0004786!1.06e-08!13;UBERON:0004921!1.43e-08!126;UBERON:0004185!1.43e-08!126;UBERON:0001008!6.42e-08!17;UBERON:0005172!2.75e-07!49;UBERON:0005173!2.75e-07!49;UBERON:0002417!2.75e-07!49;UBERON:0000916!2.75e-07!49;UBERON:0004923!7.91e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.78e-23,31;UBERON:0005409,2.29e-18,47;UBERON:0000344,8.00e-11,15;UBERON:0001007,2.51e-10,116;UBERON:0001555,2.51e-10,116;UBERON:0007026,2.51e-10,116;UBERON:0002113,2.67e-10,14;UBERON:0003918,2.67e-10,14;UBERON:0011143,2.67e-10,14;UBERON:0005095,2.67e-10,14;UBERON:0007687,2.67e-10,14;UBERON:0004119,5.74e-10,118;UBERON:0000925,5.74e-10,118;UBERON:0006595,5.74e-10,118;UBERON:0004921,3.61e-09,114;UBERON:0001242,6.88e-09,13;UBERON:0001262,6.88e-09,13;UBERON:0004786,6.88e-09,13;UBERON:0006554,2.05e-07,18;UBERON:0004923,4.93e-07,24;UBERON:0001008,6.89e-07,19 | |||
|phase1_expression=0,1.04692622291808,0.454999239389536,0.30246421130683,2.00358291978539,0.839396359559449,1.86890112476421,0,0,0,0,0,0,0,0,0,0,0,0,0,6.88850650223665,0,0,4.15980299262857,2.52350209173887,1.14846392823004,1.29228598847722,1.29282739611533,11.4014051673824,4.53654233567875,5.32153225572731,0,0,0,8.08784535303569,6.15068187826422,7.35009682544529,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0.194429899074283,0,0,0,0,0,0,0.286533439938757,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56276261003168,0,0,0,0,0,0,1.15945795480671,0,4.0798280022465,1.61910957491345,1.29955283489534,0.896053774194671,4.49422144421606,0,0,0,0,0,0,0,0,0,0,7.4219521817389,0,0,0,0.304465478312141,0,0,0.117588707135705,0,48.6974086436717,0,0,0,0,0,3.72783522436244,0,0,3.32094171771169,0,0,0,0,0,0,0,0,0,0,0.712875546952214,23.1396965334773,108.923508884914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32167513193519,5.28901133327089,0.213288250535234,0,0.77320476793256,3.42861991859682,3.7804267453628,7.03834816616469,1.89811624617805,13.6700132420929,13.5721012752146,14.1259095149217,13.2575579241002,5.39291645192533,5.61958929674205,7.56736838366595,0.379335801906163,0.456994050438915,5.63538678365402,4.68398054044223,6.20647958936402,10.8710520829994,19.6033265085198,35.2788253671249,41.9186603336471,31.9598654557463,0.889357881261447,0,0,0,0,0.241177159752417,0,0,0.324270453550071,2.74561413188081,2.87536413054709,1.48856379067401,3.12037673114561,1.76805214562978,2.87035861635059,0.482443521363367,0.369506380333209,0,0,0,0,0,0,0.390267295715598,0.157635144106191,0.44292937929755,0,0,0,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0.851640511249612,0.534196811001766,0.162886959353576,1.48473110675282,0,0,0.302323556964751,0.188605079755898,0.590603785761546,1.22974059177571,4.39328098385976,2.18120237686503,1.06949213515416,0,0,0,0,0,0,0,0,0,0,0,0.704015124191131,0.21183207086382,0,0,0,0,0,0,8.16146342563582,0,0,0,0,0,0,0,0,0,0,5.72802370809068,0,0,0.972048067396211,0,1.09181281873089,0.269728692769641,0.578574190077352,1.04702376793612,9.20266310371729,0,0,0,0.165458490457098,0,0.129159823477731,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,3.85441652145859,0,0,0,0,0.187682475451182,4.02933573387983,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0.44449345560323,0.206035057238894,1.28367683836726,0,0.760437899670719,0.188626341386076,0.655490552289177,0.320125762024346,0.516919220600519,0.476293691283074,0.231768651889711,0.192909220463705,0.412085900803307,0.147198920134397,0.342869252385415,0.532427418478012,0,0.290692833264657,0.188218760830661,0.507687647350059,0.182927972872773,0,0.679020569229309,0,0.237270036248348,0.591026894253381,0.409231043169689,0.464810523557898,0.192906610981141,0,1.16965804222704,1.07435527024149,0,0.220591419119515,0 | |||
|short_description=p@chrX:136343134..136343167,+ | |||
}} |
Latest revision as of 01:05, 6 August 2015
Short description: | p@chrX:136343134..136343167, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chrX:136343134..136343167, + |
Coexpression cluster: | MCL_coexpression_mm9:510 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 1.78e-23 | 31 |
gastrointestinal system | 2.29e-18 | 47 |
mucosa | 8.00e-11 | 15 |
digestive system | 2.51e-10 | 116 |
digestive tract | 2.51e-10 | 116 |
primitive gut | 2.51e-10 | 116 |
kidney | 2.67e-10 | 14 |
kidney mesenchyme | 2.67e-10 | 14 |
upper urinary tract | 2.67e-10 | 14 |
kidney rudiment | 2.67e-10 | 14 |
kidney field | 2.67e-10 | 14 |
endoderm-derived structure | 5.74e-10 | 118 |
endoderm | 5.74e-10 | 118 |
presumptive endoderm | 5.74e-10 | 118 |
subdivision of digestive tract | 3.61e-09 | 114 |
intestinal mucosa | 6.88e-09 | 13 |
wall of intestine | 6.88e-09 | 13 |
gastrointestinal system mucosa | 6.88e-09 | 13 |
urinary system structure | 2.05e-07 | 18 |
organ component layer | 4.93e-07 | 24 |
renal system | 6.89e-07 | 19 |