FFCP PHASE1:Mm9::chr1:40738504..40738511,+: Difference between revisions
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{{FFCP|EntrezGene=226999|HGNC=|MCL_coexpression_id=12|UniProt=Q3ZAS0,Q3TM63|association_with_transcript=-45bp_to_ENSMUST00000027231,NM_001033289,uc007aum.1,uc007aun.1_5end|description=CAGE_peak_5_at_Slc9a2_5end|id=chr1:40738504..40738511,+|ontology_enrichment_celltype=CL:0000239!2.82e-09!6;CL:0000677!2.82e-09!6;CL:0000212!2.82e-09!6;CL:0000584!2.82e-09!6;CL:0000075!8.73e-08!7|ontology_enrichment_celltype_v019_2=CL:0000682,6.81e-13,3;CL:0000239,4.68e-12,6;CL:0000677,4.68e-12,6;CL:0000584,4.68e-12,6;CL:0000075,2.36e-10,7;CL:0002563,4.49e-08,9;CL:0002251,4.49e-08,9;CL:0000066,1.19e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!2.42e-13!15;UBERON:0001242!7.74e-11!13;UBERON:0000060!7.74e-11!13;UBERON:0001262!7.74e-11!13;UBERON:0004786!7.74e-11!13;UBERON:0005409!1.47e-10!59;UBERON:0000160!1.73e-09!43;UBERON:0004923!4.69e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.07e-28,31;UBERON:0005409,9.80e-24,47;UBERON:0000344,1.65e-22,15;UBERON:0001242,1.05e-20,13;UBERON:0001262,1.05e-20,13;UBERON:0004786,1.05e-20,13;UBERON:0004923,1.41e-13,24;UBERON:0000331,1.60e-13,3;UBERON:0002116,1.60e-13,3;UBERON:0001204,1.60e-13,3;UBERON:0001168,1.60e-13,3;UBERON:0002108,2.87e-10,4;UBERON:0001155,1.81e-09,2;UBERON:0000059,1.81e-09,2;UBERON:0001007,3.79e-09,116;UBERON:0001555,3.79e-09,116;UBERON:0007026,3.79e-09,116;UBERON:0004119,6.09e-09,118;UBERON:0000925,6.09e-09,118;UBERON:0006595,6.09e-09,118;UBERON:0004921,4.09e-08,114;UBERON:0003350,4.49e-08,9;UBERON:0004808,4.49e-08,9;UBERON:0001277,4.49e-08,9|phase1_expression=0,3.83872948403297,4.54999239389536,1.51232105653415,4.00716583957078,0.671517087647559,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0.95995453676044,2.52350209173887,3.44539178469012,1.29228598847722,1.07735616342945,3.99049180858385,2.01624103807945,1.77384408524244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0.216491041011214,0,0,0.68510327831436,0,0,0,0,0,0,0,0,0,0,0,0,0.441683036920787,0,1.86391761218122,0,0,2.04365644166873,0,0,0,0,0,0,0,0,0,0.162241263067758,0,0,0.252722758433675,0,0,0,0,0,0.136072998302656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.62586296177317,1.05780226665418,0,0,0,0,0,0,1.89811624617805,0.164698954724011,0,0.795825888164603,0,1.79763881730844,2.59365659849633,1.39398891278057,0,0,0,0,0,0.140271639780637,0.252946148497029,0.442830443938806,0.31399745568275,0.370191491765402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661585194164886,0.16488625294148,0,0.241251699712623,0.119372344003136,0.656563598980245,0.582961673259701,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0.655087691238533,0.134864346384821,0.247960367176008,1.30877970992015,6.09190374471426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15241361331,0,0,0,0,0,0,0,0,0,0,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128050304809739,0.17230640686684,0.476293691283074,0.115884325944855,0,0.412085900803307,0,0,0.532427418478012,0,0.290692833264657,0,0,0,0.263069711437843,0.135804113845862,0.561142271657738,0.118635018124174,0,0,0,0.192906610981141,0,0,0,0.191288332068843,0.220591419119515,0.231867835620421|short_description=p5@Slc9a2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:226999 | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q3ZAS0,uniprot:Q3TM63 | |||
|association_with_transcript=-45bp_to_ENSMUST00000027231,NM_001033289,uc007aum.1,uc007aun.1_5end | |||
|cluster_id=chr1:40738504..40738511,+ | |||
|description=CAGE_peak_5_at_Slc9a2_5end | |||
|id=chr1:40738504..40738511,+ | |||
|ontology_enrichment_celltype=CL:0000239!2.82e-09!6;CL:0000677!2.82e-09!6;CL:0000212!2.82e-09!6;CL:0000584!2.82e-09!6;CL:0000075!8.73e-08!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,6.81e-13,3;CL:0000239,4.68e-12,6;CL:0000677,4.68e-12,6;CL:0000584,4.68e-12,6;CL:0000075,2.36e-10,7;CL:0002563,4.49e-08,9;CL:0002251,4.49e-08,9;CL:0000066,1.19e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!2.42e-13!15;UBERON:0001242!7.74e-11!13;UBERON:0000060!7.74e-11!13;UBERON:0001262!7.74e-11!13;UBERON:0004786!7.74e-11!13;UBERON:0005409!1.47e-10!59;UBERON:0000160!1.73e-09!43;UBERON:0004923!4.69e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.07e-28,31;UBERON:0005409,9.80e-24,47;UBERON:0000344,1.65e-22,15;UBERON:0001242,1.05e-20,13;UBERON:0001262,1.05e-20,13;UBERON:0004786,1.05e-20,13;UBERON:0004923,1.41e-13,24;UBERON:0000331,1.60e-13,3;UBERON:0002116,1.60e-13,3;UBERON:0001204,1.60e-13,3;UBERON:0001168,1.60e-13,3;UBERON:0002108,2.87e-10,4;UBERON:0001155,1.81e-09,2;UBERON:0000059,1.81e-09,2;UBERON:0001007,3.79e-09,116;UBERON:0001555,3.79e-09,116;UBERON:0007026,3.79e-09,116;UBERON:0004119,6.09e-09,118;UBERON:0000925,6.09e-09,118;UBERON:0006595,6.09e-09,118;UBERON:0004921,4.09e-08,114;UBERON:0003350,4.49e-08,9;UBERON:0004808,4.49e-08,9;UBERON:0001277,4.49e-08,9 | |||
|phase1_expression=0,3.83872948403297,4.54999239389536,1.51232105653415,4.00716583957078,0.671517087647559,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0.95995453676044,2.52350209173887,3.44539178469012,1.29228598847722,1.07735616342945,3.99049180858385,2.01624103807945,1.77384408524244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0.216491041011214,0,0,0.68510327831436,0,0,0,0,0,0,0,0,0,0,0,0,0.441683036920787,0,1.86391761218122,0,0,2.04365644166873,0,0,0,0,0,0,0,0,0,0.162241263067758,0,0,0.252722758433675,0,0,0,0,0,0.136072998302656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.62586296177317,1.05780226665418,0,0,0,0,0,0,1.89811624617805,0.164698954724011,0,0.795825888164603,0,1.79763881730844,2.59365659849633,1.39398891278057,0,0,0,0,0,0.140271639780637,0.252946148497029,0.442830443938806,0.31399745568275,0.370191491765402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661585194164886,0.16488625294148,0,0.241251699712623,0.119372344003136,0.656563598980245,0.582961673259701,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0.655087691238533,0.134864346384821,0.247960367176008,1.30877970992015,6.09190374471426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15241361331,0,0,0,0,0,0,0,0,0,0,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128050304809739,0.17230640686684,0.476293691283074,0.115884325944855,0,0.412085900803307,0,0,0.532427418478012,0,0.290692833264657,0,0,0,0.263069711437843,0.135804113845862,0.561142271657738,0.118635018124174,0,0,0,0.192906610981141,0,0,0,0.191288332068843,0.220591419119515,0.231867835620421 | |||
|short_description=p5@Slc9a2 | |||
}} |
Revision as of 16:14, 5 August 2015
Short description: | p5@Slc9a2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Slc9a2_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | -45bp_to_ENSMUST00000027231, NM_001033289, uc007aum.1, uc007aun.1_5end |
EntrezGene: | 226999 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 6.81e-13 | 3 |
brush border epithelial cell | 4.68e-12 | 6 |
gut absorptive cell | 4.68e-12 | 6 |
enterocyte | 4.68e-12 | 6 |
columnar/cuboidal epithelial cell | 2.36e-10 | 7 |
intestinal epithelial cell | 4.49e-08 | 9 |
epithelial cell of alimentary canal | 4.49e-08 | 9 |
epithelial cell | 1.19e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.07e-28 | 31 |
gastrointestinal system | 9.80e-24 | 47 |
mucosa | 1.65e-22 | 15 |
intestinal mucosa | 1.05e-20 | 13 |
wall of intestine | 1.05e-20 | 13 |
gastrointestinal system mucosa | 1.05e-20 | 13 |
organ component layer | 1.41e-13 | 24 |
ileal mucosa | 1.60e-13 | 3 |
ileum | 1.60e-13 | 3 |
mucosa of small intestine | 1.60e-13 | 3 |
wall of small intestine | 1.60e-13 | 3 |
small intestine | 2.87e-10 | 4 |
colon | 1.81e-09 | 2 |
large intestine | 1.81e-09 | 2 |
digestive system | 3.79e-09 | 116 |
digestive tract | 3.79e-09 | 116 |
primitive gut | 3.79e-09 | 116 |
endoderm-derived structure | 6.09e-09 | 118 |
endoderm | 6.09e-09 | 118 |
presumptive endoderm | 6.09e-09 | 118 |
subdivision of digestive tract | 4.09e-08 | 114 |
epithelium of mucosa | 4.49e-08 | 9 |
gastrointestinal system epithelium | 4.49e-08 | 9 |
intestinal epithelium | 4.49e-08 | 9 |