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FFCP PHASE1:Mm9::chr9:65756774..65756826,+: Difference between revisions

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{{FFCP|EntrezGene=214897|HGNC=|MCL_coexpression_id=895|UniProt=Q8BTH8,D3Z2A2,Q6P2B2,Q8C4X2|association_with_transcript=0bp_to_ENSMUST00000034949,ENSMUST00000146069,ENSMUST00000154589,NM_173185,uc009qee.1,uc009qef.1,uc009qeg.1_5end|description=CAGE_peak_2_at_Csnk1g1_5end|id=chr9:65756774..65756826,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!4.55e-10!29;UBERON:0002370!5.06e-09!23;UBERON:0000974!5.06e-09!23;UBERON:0004807!5.06e-09!23;UBERON:0005058!5.06e-09!23;UBERON:0003351!5.06e-09!23;UBERON:0009113!5.06e-09!23;UBERON:0003295!5.06e-09!23;UBERON:0009722!5.06e-09!23;UBERON:0005562!5.06e-09!23;UBERON:0007690!5.06e-09!23;UBERON:0006562!5.54e-09!24;UBERON:0001557!5.54e-09!24;UBERON:0001042!5.54e-09!24;UBERON:0008814!5.54e-09!24;UBERON:0009145!5.54e-09!24;UBERON:0003408!4.05e-08!24;UBERON:0000064!4.69e-08!99;UBERON:0004119!3.54e-07!130;UBERON:0000925!3.54e-07!130;UBERON:0006595!3.54e-07!130;UBERON:0001007!5.92e-07!128;UBERON:0001555!5.92e-07!128;UBERON:0007026!5.92e-07!128|ontology_enrichment_uberon_v019_2=UBERON:0000077,7.75e-11,35;UBERON:0004177,4.55e-10,29;UBERON:0005057,4.55e-10,29;UBERON:0002370,5.06e-09,23;UBERON:0000974,5.06e-09,23;UBERON:0004807,5.06e-09,23;UBERON:0005058,5.06e-09,23;UBERON:0003351,5.06e-09,23;UBERON:0009113,5.06e-09,23;UBERON:0003295,5.06e-09,23;UBERON:0009722,5.06e-09,23;UBERON:0005562,5.06e-09,23;UBERON:0007690,5.06e-09,23;UBERON:0006562,5.54e-09,24;UBERON:0001557,5.54e-09,24;UBERON:0001042,5.54e-09,24;UBERON:0008814,5.54e-09,24;UBERON:0009145,5.54e-09,24;UBERON:0003408,4.05e-08,24;UBERON:0004119,4.94e-08,118;UBERON:0000925,4.94e-08,118;UBERON:0006595,4.94e-08,118;UBERON:0001007,8.40e-08,116;UBERON:0001555,8.40e-08,116;UBERON:0007026,8.40e-08,116;UBERON:0000160,3.19e-07,31;UBERON:0004921,3.22e-07,114|phase1_expression=5.44506080156299,20.2405736430829,20.0199665331396,31.1538137646035,31.5564309866199,9.9048770428015,12.3814699515629,26.7285279524063,9.15126693985834,7.72412936862578,16.4369249496485,17.8689636149554,34.4113467161724,23.6035086531293,10.6595123781012,13.7683181825082,7.69518065940961,26.6565529727711,34.6899517022519,28.00971701867,10.8004978491859,10.6241317784947,13.5823890352246,15.1992801653736,11.9292826154928,16.6527269593356,15.0766698655676,15.2984575206981,13.1116159424898,15.3738379153558,9.75614246883341,6.98533740805594,4.92051830067656,0,5.48818077527422,6.4831511689812,5.71674197534634,30.1342774130574,28.9094077473806,30.8879008944541,42.352667138233,38.9335926426314,32.0436833000561,2.64383317748712,3.14268486780495,4.22157529971868,1.56478268869608,2.39827672018491,1.75748946187577,1.36100929351998,2.93971485413261,1.43752564364972,16.9460432118314,29.7398478224651,35.6259427091012,3.08711323243136,4.29800159908135,4.12537673821954,11.3297218081375,5.81890077199236,3.80298842103708,3.72728985276045,0.889294796111139,4.94944844504769,1.97773272513395,0.7104801149461,0.299600110518405,2.30530983192933,7.77672092313582,8.23536223823313,6.73039876324422,4.57041575046086,4.41737081903227,9.18680994112155,7.28425579738596,4.5960939330501,5.50579404996943,6.51205424234457,5.37622866396852,9.49581271657396,9.97215315266265,6.77187381723788,5.30447698102624,6.75315132038016,5.04234217663473,3.24091444021034,5.41012387036591,7.45597783301202,5.37655972665607,4.76100828672749,11.8844440367688,10.3250865237766,4.0798280022465,3.2382191498269,4.54843492213368,6.2723764193627,4.63466586434781,2.04516387093669,4.1565760736459,2.82671659608272,5.49289337129054,12.8326477414318,10.1922095882658,7.11066703153331,5.41227602528035,2.28023878927589,3.53867111510348,10.9616524530298,24.3401610628341,6.08612770165782,3.46970653532272,2.43572382649713,3.45923245884088,5.72746034099966,7.05532242814229,4.14699751387929,5.6854842578906,6.07317299063629,11.4999371753484,5.01477234836968,8.61281921995535,8.727754556434,13.0474232852686,10.2473278954042,6.28340120440365,14.8165092020983,8.38705871541442,7.7987355029143,8.38663498682227,6.44099749440738,7.32000964509802,13.0680526197379,5.38855392596057,5.37002460393694,4.77912502486988,8.27430441645564,6.31404055871961,12.5651040316194,6.06534620240819,7.36546495602659,5.46505860443356,3.90833577536904,6.66229880279792,7.83665052745718,6.73561341598146,7.55870949680614,6.55912071918102,7.76110112217047,4.74249584452253,6.05139456537022,3.69497360744293,3.5071317188412,8.34141747676794,6.268538997399,7.20237477427802,3.78165106955137,2.80885274925294,4.88961023517959,5.11494298912067,6.42089894860056,4.22146907965973,6.12211008967451,3.78791576936336,6.49321964766433,4.62801338662135,6.27841650826101,5.36546802799238,6.07179780309281,5.59503489705834,4.92502392237286,5.99909190639332,6.14039947186396,5.04965265169416,6.30770168173747,6.72927835405207,7.20332286654991,26.7639214216876,14.0158800331678,6.82522401712749,4.64473343720877,6.57224052742676,9.27744213267376,9.11749979763968,10.0819581839656,11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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:214897
|HGNC=
|MCL_coexpression_id=895
|TSSclassifier=NA
|UniProt=uniprot:Q8BTH8,uniprot:D3Z2A2,uniprot:Q6P2B2,uniprot:Q8C4X2
|association_with_transcript=0bp_to_ENSMUST00000034949,ENSMUST00000146069,ENSMUST00000154589,NM_173185,uc009qee.1,uc009qef.1,uc009qeg.1_5end
|cluster_id=chr9:65756774..65756826,+
|description=CAGE_peak_2_at_Csnk1g1_5end
|id=chr9:65756774..65756826,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004177!4.55e-10!29;UBERON:0002370!5.06e-09!23;UBERON:0000974!5.06e-09!23;UBERON:0004807!5.06e-09!23;UBERON:0005058!5.06e-09!23;UBERON:0003351!5.06e-09!23;UBERON:0009113!5.06e-09!23;UBERON:0003295!5.06e-09!23;UBERON:0009722!5.06e-09!23;UBERON:0005562!5.06e-09!23;UBERON:0007690!5.06e-09!23;UBERON:0006562!5.54e-09!24;UBERON:0001557!5.54e-09!24;UBERON:0001042!5.54e-09!24;UBERON:0008814!5.54e-09!24;UBERON:0009145!5.54e-09!24;UBERON:0003408!4.05e-08!24;UBERON:0000064!4.69e-08!99;UBERON:0004119!3.54e-07!130;UBERON:0000925!3.54e-07!130;UBERON:0006595!3.54e-07!130;UBERON:0001007!5.92e-07!128;UBERON:0001555!5.92e-07!128;UBERON:0007026!5.92e-07!128
|ontology_enrichment_uberon_v019_2=UBERON:0000077,7.75e-11,35;UBERON:0004177,4.55e-10,29;UBERON:0005057,4.55e-10,29;UBERON:0002370,5.06e-09,23;UBERON:0000974,5.06e-09,23;UBERON:0004807,5.06e-09,23;UBERON:0005058,5.06e-09,23;UBERON:0003351,5.06e-09,23;UBERON:0009113,5.06e-09,23;UBERON:0003295,5.06e-09,23;UBERON:0009722,5.06e-09,23;UBERON:0005562,5.06e-09,23;UBERON:0007690,5.06e-09,23;UBERON:0006562,5.54e-09,24;UBERON:0001557,5.54e-09,24;UBERON:0001042,5.54e-09,24;UBERON:0008814,5.54e-09,24;UBERON:0009145,5.54e-09,24;UBERON:0003408,4.05e-08,24;UBERON:0004119,4.94e-08,118;UBERON:0000925,4.94e-08,118;UBERON:0006595,4.94e-08,118;UBERON:0001007,8.40e-08,116;UBERON:0001555,8.40e-08,116;UBERON:0007026,8.40e-08,116;UBERON:0000160,3.19e-07,31;UBERON:0004921,3.22e-07,114
|phase1_expression=5.44506080156299,20.2405736430829,20.0199665331396,31.1538137646035,31.5564309866199,9.9048770428015,12.3814699515629,26.7285279524063,9.15126693985834,7.72412936862578,16.4369249496485,17.8689636149554,34.4113467161724,23.6035086531293,10.6595123781012,13.7683181825082,7.69518065940961,26.6565529727711,34.6899517022519,28.00971701867,10.8004978491859,10.6241317784947,13.5823890352246,15.1992801653736,11.9292826154928,16.6527269593356,15.0766698655676,15.2984575206981,13.1116159424898,15.3738379153558,9.75614246883341,6.98533740805594,4.92051830067656,0,5.48818077527422,6.4831511689812,5.71674197534634,30.1342774130574,28.9094077473806,30.8879008944541,42.352667138233,38.9335926426314,32.0436833000561,2.64383317748712,3.14268486780495,4.22157529971868,1.56478268869608,2.39827672018491,1.75748946187577,1.36100929351998,2.93971485413261,1.43752564364972,16.9460432118314,29.7398478224651,35.6259427091012,3.08711323243136,4.29800159908135,4.12537673821954,11.3297218081375,5.81890077199236,3.80298842103708,3.72728985276045,0.889294796111139,4.94944844504769,1.97773272513395,0.7104801149461,0.299600110518405,2.30530983192933,7.77672092313582,8.23536223823313,6.73039876324422,4.57041575046086,4.41737081903227,9.18680994112155,7.28425579738596,4.5960939330501,5.50579404996943,6.51205424234457,5.37622866396852,9.49581271657396,9.97215315266265,6.77187381723788,5.30447698102624,6.75315132038016,5.04234217663473,3.24091444021034,5.41012387036591,7.45597783301202,5.37655972665607,4.76100828672749,11.8844440367688,10.3250865237766,4.0798280022465,3.2382191498269,4.54843492213368,6.2723764193627,4.63466586434781,2.04516387093669,4.1565760736459,2.82671659608272,5.49289337129054,12.8326477414318,10.1922095882658,7.11066703153331,5.41227602528035,2.28023878927589,3.53867111510348,10.9616524530298,24.3401610628341,6.08612770165782,3.46970653532272,2.43572382649713,3.45923245884088,5.72746034099966,7.05532242814229,4.14699751387929,5.6854842578906,6.07317299063629,11.4999371753484,5.01477234836968,8.61281921995535,8.727754556434,13.0474232852686,10.2473278954042,6.28340120440365,14.8165092020983,8.38705871541442,7.7987355029143,8.38663498682227,6.44099749440738,7.32000964509802,13.0680526197379,5.38855392596057,5.37002460393694,4.77912502486988,8.27430441645564,6.31404055871961,12.5651040316194,6.06534620240819,7.36546495602659,5.46505860443356,3.90833577536904,6.66229880279792,7.83665052745718,6.73561341598146,7.55870949680614,6.55912071918102,7.76110112217047,4.74249584452253,6.05139456537022,3.69497360744293,3.5071317188412,8.34141747676794,6.268538997399,7.20237477427802,3.78165106955137,2.80885274925294,4.88961023517959,5.11494298912067,6.42089894860056,4.22146907965973,6.12211008967451,3.78791576936336,6.49321964766433,4.62801338662135,6.27841650826101,5.36546802799238,6.07179780309281,5.59503489705834,4.92502392237286,5.99909190639332,6.14039947186396,5.04965265169416,6.30770168173747,6.72927835405207,7.20332286654991,26.7639214216876,14.0158800331678,6.82522401712749,4.64473343720877,6.57224052742676,9.27744213267376,9.11749979763968,10.0819581839656,11.3886974770683,8.72904460037258,9.55073793441024,7.95825888164603,10.3330966173134,15.2799299471218,14.2651112917298,12.5459002150251,4.36236172192088,6.740662243974,6.76246414038483,7.33144780243131,7.95205197387266,6.73303870947058,8.03104021478068,6.6424566590821,6.75094529717912,5.67626954040282,3.55743152504579,7.67487486294033,5.89676985339609,7.42044970870017,7.70868461276311,8.20002343158217,6.87489799809833,6.04161888646702,3.24270453550071,4.3929826110093,21.5652309791032,5.95425516269605,3.74445207737473,4.79899868099512,4.12614051100398,3.85954817090694,9.23765950833023,4.54779388249163,4.23708938749267,7.80827394565865,5.39787571063555,8.87783164441623,7.37935286746643,6.43941037930736,10.0886492227962,6.64394068946325,7.81328366421687,10.1595255123758,8.28887912956299,8.38964539772767,4.52373851817817,3.80733978673097,10.3270497333998,6.34654516500885,4.17431533968259,5.97779601620236,4.26230857979356,5.80683132570058,4.73262329124385,3.12350995437311,3.87762115919038,5.4962823529087,3.34198011123591,4.52922449262132,2.02405350837447,5.26060544240361,6.32460444714438,8.9969968598106,6.38730383437209,3.20518086601059,4.56083486190013,8.57844639457184,3.98235415019888,4.85561272309963,4.23252979750651,6.78978287121233,4.42952839321159,6.45613810682248,8.01127708821486,5.81653967164009,7.12994756769443,10.1131762539461,18.9753495434998,7.21948802737308,12.2558258071364,4.50152735078276,4.01011919726539,7.07312215604255,7.98031051390231,5.35106452806212,6.74650984468696,3.34911444026059,8.91752490642099,7.62595455109753,7.93902232997863,11.8718102117866,9.52640117505843,8.7453741145826,10.2660215842697,10.833299383174,11.3677526285642,6.48988557036784,12.3027034174454,6.81076664278634,8.51894825900674,8.4765805652111,12.0290920394502,15.7856939512501,8.49892149969276,8.53703859174314,9.95039811391851,3.81868247206045,4.4287039101359,4.67634774391752,6.91234181259528,7.10900206449194,6.33251434863915,5.66430254816247,7.19085064810423,4.97336289769656,11.0172727298024,4.34937519160848,19.1655599152625,7.47582730219894,5.62558867554132,7.58359634541786,5.8121920564979,6.25137664315879,6.92407708009948,8.72369378454466,10.9053718202739,14.0118790079084,17.8578603879877,19.2766783583189,4.66267995167378,7.80603274452687,11.1731907760904,16.2914293057408,14.1063761894698,20.0726400698348,19.9380861685679,24.2319479875554,23.47169644974,24.8032415436628,28.9449905797065,26.1696209261696,31.3230097846605,7.9355634265324,8.43546622821446,7.71539166841491,7.89057696911169,8.88672132548076,6.94425159169373,9.70703608616505,9.64657705855796,11.5361583928134,6.7770221114048,8.28585425712918,6.30185064783336,4.98374228796694,13.7016503954128,7.55393897389701,5.40018000185445,7.20513925158753,4.98456649882625,13.4617681055473,6.33102820263478,3.19219898720825,5.46347538413229,5.10524105843418,6.07878171621149,4.77993121970037,8.88986911206461,8.65347240403356,5.45562656306086,7.07552192938633,7.09742039692671,4.71565853465191,7.11675456771106,8.06716920301353,6.4902079919843,6.19181798667996,8.57544011991931,8.48800570040302,5.76920261124629,6.62395140604788,7.54312355247914,6.56660482789549,6.67621331852499,7.41266724824875,5.92889096616583,8.20761696549262,5.85369513192872,5.26139422875686,10.5927208799772,7.85599180320834,7.71127617807132,6.69830480153832,5.32000356120596,6.8172210121825,8.10207766120794,8.49355964989016,5.14649538579898,6.01638951335235,7.46024495068489,4.85301122062934,3.2461496986859
|short_description=p2@Csnk1g1
}}

Revision as of 12:25, 5 August 2015

Short description:p2@Csnk1g1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Csnk1g1_5end
Coexpression cluster:MCL_coexpression_mm9:895
Association with transcript: 0bp_to_ENSMUST00000034949, ENSMUST00000146069, ENSMUST00000154589, NM_173185, uc009qee.1, uc009qef.1, uc009qeg.1_5end
EntrezGene:214897
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Csnk1g1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G75.45
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I520.24
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I620.02
CD326+ enterocyte, pool1.CNhs13542.11848-124I331.15
CD326+ enterocyte, pool2.CNhs13197.11849-124I431.56
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I79.90
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I812.38
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E926.73
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E79.15
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F27.72
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E616.44
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F117.87
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E434.41
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E823.60
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A110.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A313.77
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A57.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A226.66
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A434.69
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A628.01
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A310.80
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H210.62
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I913.58
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D115.20
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D211.93
GP2+ M cell, pool1.CNhs13228.11845-124H916.65
GP2+ M cell, pool2.CNhs13231.11846-124I115.08
GP2+ M cell, pool3.CNhs13240.11847-124I215.30
Ileum epithelium, pool1.CNhs13199.10252-104B913.11
Ileum epithelium, pool2.CNhs13232.10253-104C115.37
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C89.76
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I36.99
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G64.92
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F55.49
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F66.48
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F75.72
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G830.13
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H128.91
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H330.89
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G942.35
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H238.93
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H432.04
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.64
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D93.14
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B34.22
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.40
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.76
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.36
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.94
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A216.95
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I929.74
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A135.63
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C13.09
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E14.30
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C54.13
Mouse Granule cells, donor1.CNhs12131.11713-123C311.33
Mouse Granule cells, donor2.CNhs12357.11731-123E35.82
Mouse Granule cells, donor3.CNhs12108.11636-122C73.80
Mouse Meningeal cells, donor1.CNhs12132.11716-123C63.73
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C74.95
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E82.31
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D57.78
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F58.24
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D96.73
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.42
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D29.19
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F27.28
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D64.60
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D35.51
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F36.51
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D75.38
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D49.50
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F49.97
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D86.77
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.30
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E56.75
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I65.04
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.24
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.41
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E17.46
Mouse Schwann, donor1.CNhs12507.11728-123D95.38
Mouse Schwann, donor2.CNhs12573.11746-123F94.76
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G311.88
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F710.33
Mouse hepatocyte, donor1.CNhs13078.11714-123C44.08
Mouse hepatocyte, donor3.CNhs12615.11637-122C83.24
Mouse hepatocyte, donor6.CNhs13090.11822-124F44.55
Mouse hepatocyte, donor8.CNhs13091.11824-124F66.27
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A74.63
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.05
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E34.16
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I82.83
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G65.49
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H112.83
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I810.19
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G15.41
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.28
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G33.54
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B610.96
accessory axillary lymph node, adult.CNhs10475.1063-29H924.34
adrenal gland, adult.CNhs10508.49-24D76.09
adrenal gland, embryo E14.CNhs11038.406-44C53.47
adrenal gland, embryo E16.CNhs11004.1254-43D62.44
adrenal gland, embryo E17.CNhs11043.1263-45I13.46
adrenal gland, embryo E18.CNhs11026.1262-18F55.73
adrenal gland, neonate N00.CNhs11191.1311-23C17.06
adrenal gland, neonate N25.CNhs11223.1377-27I34.15
amnion, adult pregnant day17.5.CNhs10488.583-22A85.69
aorta, adult.CNhs10498.46-23H16.07
bone (os femoris), adult.CNhs10483.56-12G211.50
bone (os femoris), neonate N02.CNhs11227.1985-43F55.01
bone (os femoris), neonate N16.CNhs11225.1525-43A68.61
bone (os femoris), neonate N20.CNhs11195.1350-25C38.73
cecum, adult.CNhs10467.37-13H413.05
cerebellum, adult.CNhs10494.15-8B210.25
cerebellum, neonate N30.CNhs11135.1395-42I26.28
colon, adult.CNhs10468.36-18H714.82
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C78.39
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D17.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D48.39
corpora quadrigemina, adult.CNhs10501.16-22A46.44
corpus striatum, adult.CNhs10487.19-21D87.32
corpus striatum, neonate N00.CNhs11226.630-43F113.07
cortex, adult.CNhs10473.12-14D55.39
cortex, neonate N30.CNhs11107.1392-42F25.37
diencephalon, adult.CNhs10482.20-12F24.78
diencephalon, neonate N30.CNhs11201.1388-42B28.27
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B16.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A212.57
epididymis, adult.CNhs10490.58-23B26.07
eyeball, adult.CNhs10484.31-12G47.37
eyeball, embryo E12.CNhs11016.345-16C65.47
eyeball, embryo E14.CNhs10521.399-16E23.91
eyeball, embryo E15.CNhs10593.426-16C96.66
eyeball, embryo E17.CNhs11023.1261-18D47.84
eyeball, neonate N00.CNhs11207.633-15C66.74
eyeball, neonate N01.CNhs11140.1532-43E77.56
eyeball, neonate N02.CNhs11205.1551-44G86.56
eyeball, neonate N16.CNhs11188.777-19A27.76
forelimb, embryo E11.CNhs10596.335-25E24.74
forelimb, embryo E12.CNhs10600.359-14H26.05
forelimb, embryo E13.CNhs10589.384-1E23.69
forelimb, embryo E14.CNhs10577.413-26A83.51
forelimb, embryo E15.CNhs11007.437-20E78.34
forelimb, embryo E17.CNhs10598.1517-43C46.27
forelimb, embryo E18.CNhs11008.1520-43B57.20
gonad, embryo E13.CNhs11044.1564-45I63.78
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.81
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D24.89
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D55.11
heart, embryo E11.CNhs10586.331-24E96.42
heart, embryo E12.CNhs11015.353-12F54.22
heart, embryo E13.CNhs11013.376-3I96.12
heart, embryo E14.CNhs10597.403-26D43.79
heart, embryo E15.CNhs11017.431-16C86.49
heart, embryo E16.CNhs11021.457-17C64.63
heart, embryo E17.CNhs11025.479-18E56.28
heart, embryo E18.CNhs11030.1283-20G35.37
heart, neonate N00.CNhs11213.639-21E36.07
heart, neonate N03.CNhs11221.1349-25I25.60
heart, neonate N10.CNhs11118.749-24G14.93
heart, neonate N16.CNhs11209.782-15G16.00
heart, neonate N20.CNhs11127.821-26I66.14
heart, neonate N25.CNhs11196.1351-25D35.05
heart, neonate N30.CNhs11202.1390-42D26.31
hippocampus, adult.CNhs10478.13-16E86.73
hippocampus, neonate N00.CNhs11228.627-43G17.20
intestinal mucosa, adult.CNhs10506.860-29I326.76
intestine, adult.CNhs10496.178-9A314.02
intestine, embryo E12.CNhs11019.1251-16I56.83
intestine, embryo E13.CNhs11010.381-16D54.64
intestine, embryo E15.CNhs10602.976-16D86.57
intestine, embryo E16.CNhs10585.463-22H49.28
intestine, embryo E17.CNhs10582.482-18D39.12
intestine, embryo E18.CNhs10526.1289-20F710.08
intestine, neonate N00.CNhs11126.644-26D111.39
intestine, neonate N01.CNhs11192.1322-23E98.73
intestine, neonate N06.CNhs11102.688-20B89.55
intestine, neonate N07.CNhs11095.720-20F27.96
intestine, neonate N10.CNhs11098.755-23A510.33
intestine, neonate N20.CNhs11187.827-18D115.28
intestine, neonate N25.CNhs11121.1352-25E314.27
intestine, neonate N30.CNhs11131.1384-42G112.55
kidney, embryo E14.CNhs10606.411-4I94.36
kidney, embryo E15.CNhs10997.434-16F86.74
kidney, embryo E16.CNhs10584.464-22A56.76
kidney, embryo E17.CNhs11028.483-18I27.33
kidney, embryo E18.CNhs11001.1288-20C77.95
kidney, neonate N00.CNhs11214.646-21G76.73
kidney, neonate N10.CNhs11206.758-6D58.03
kidney, neonate N20.CNhs11113.832-19I16.64
kidney, neonate N25.CNhs11122.1353-25F36.75
kidney, neonate N30.CNhs11203.1385-42H15.68
liver, adult pregnant day01.CNhs10466.508-5B23.56
liver, embryo E12.CNhs10601.355-15F87.67
liver, embryo E13.CNhs10524.378-3H65.90
liver, embryo E14.CNhs10594.409-16E17.42
liver, embryo E15.CNhs10520.433-16D77.71
liver, embryo E16.CNhs10523.462-17F58.20
liver, embryo E17.CNhs10510.481-18A36.87
liver, embryo E18.CNhs10579.499-43G46.04
liver, neonate N00.CNhs11117.641-24F43.24
liver, neonate N03.CNhs11123.1345-25G24.39
liver, neonate N06.CNhs11101.684-20A821.57
liver, neonate N07.CNhs11103.716-20H25.95
liver, neonate N10.CNhs11115.751-24B93.74
liver, neonate N20.CNhs11220.823-25A34.80
liver, neonate N25.CNhs11198.1368-26H14.13
liver, neonate N30.CNhs11106.1382-42D13.86
lung, adult.CNhs10474.28-22B19.24
lung, embryo E12.CNhs10522.354-16G24.55
lung, embryo E14.CNhs10604.404-26F84.24
lung, embryo E15.CNhs11020.432-17C57.81
lung, embryo E16.CNhs10998.458-17B65.40
lung, embryo E17.CNhs10605.480-44A68.88
lung, embryo E18.CNhs10583.1287-20I67.38
lung, neonate N00.CNhs11224.640-42C66.44
lung, neonate N06.CNhs11212.683-20E510.09
lung, neonate N07.CNhs11111.715-19A36.64
lung, neonate N10.CNhs11219.750-23E67.81
lung, neonate N20.CNhs11109.822-18A410.16
lung, neonate N25.CNhs11119.1359-25C78.29
lung, neonate N30.CNhs11133.1394-42H28.39
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A14.52
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A13.81
mammary gland, adult lactating day02.CNhs10480.595-22B610.33
mammary gland, adult pregnant day19.CNhs10476.588-5H26.35
medulla oblongata, adult.CNhs10477.17-12C24.17
medulla oblongata, neonate N30.CNhs11200.1396-42A35.98
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C74.26
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C25.81
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E14.73
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.12
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E33.88
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D75.50
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D83.34
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D94.53
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.02
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D55.26
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D66.32
olfactory brain, adult.CNhs10489.18-22I99.00
ovary, adult.CNhs10507.91-2I76.39
ovary, embryo E18.CNhs11040.505-44H73.21
ovary, neonate N00.CNhs11217.1299-22I44.56
oviduct, adult pregnant day01.CNhs10500.988-6G68.58
pancreas, adult.CNhs10486.34-16E43.98
pancreas, embryo E14.CNhs11012.405-44F44.86
pancreas, embryo E15.CNhs11042.1556-45F24.23
pancreas, embryo E16.CNhs11003.460-26E56.79
pancreas, embryo E17.CNhs10599.1558-45G34.43
pancreas, embryo E18.CNhs10580.1535-43I76.46
pancreas, neonate N00.CNhs11105.645-26G98.01
pancreas, neonate N01.CNhs11138.1531-43D75.82
pancreas, neonate N02.CNhs11139.1539-43D87.13
pancreas, neonate N16.CNhs11136.787-43B610.11
pancreas, neonate N25.CNhs11094.1555-45E218.98
pancreas, neonate N30.CNhs11182.1548-44H57.22
pituitary gland, adult.CNhs10493.21-1G812.26
pituitary gland, embryo E12.CNhs11018.346-16E64.50
pituitary gland, embryo E13.CNhs11009.370-44C74.01
pituitary gland, embryo E14.CNhs11037.398-44A57.07
pituitary gland, embryo E15.CNhs10592.427-16B97.98
pituitary gland, embryo E16.CNhs11036.449-43F65.35
pituitary gland, embryo E17.CNhs11039.1265-44F56.75
pituitary gland, neonate N00.CNhs11190.1308-22E93.35
placenta, adult pregnant day10.CNhs10472.539-13I78.92
placenta, adult pregnant day17.CNhs10464.577-18G37.63
prostate, adult.CNhs10470.859-1F87.94
skin, adult.CNhs10492.30-1C311.87
skin, neonate N00.CNhs11124.650-25G49.53
skin, neonate N03.CNhs11215.662-22H38.75
skin, neonate N06.CNhs11097.693-20I510.27
skin, neonate N10.CNhs11108.762-6C410.83
small intestine, neonate N16.CNhs11114.790-21I111.37
spinal cord, adult.CNhs10505.24-13C96.49
spleen, adult.CNhs10465.25-2G212.30
spleen, embryo E16.CNhs11035.461-43C16.81
spleen, embryo E18.CNhs11011.1271-21F28.52
spleen, neonate N10.CNhs11116.752-24D18.48
spleen, neonate N20.CNhs11112.824-19H112.03
spleen, neonate N25.CNhs11099.1354-25G315.79
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C68.50
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C98.54
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D39.95
stomach, adult.CNhs10503.33-1H63.82
stomach, embryo E12.CNhs10588.356-43E34.43
stomach, embryo E15.CNhs10603.1252-16G84.68
stomach, embryo E16.CNhs11022.459-17D46.91
stomach, embryo E17.CNhs11006.1035-18D57.11
stomach, embryo E18.CNhs10999.1286-20C66.33
stomach, neonate N03.CNhs11193.1340-24B85.66
stomach, neonate N07.CNhs11210.718-18A97.19
stomach, neonate N25.CNhs11104.1355-25E44.97
stomach, neonate N30.CNhs11134.1386-42I111.02
submandibular gland, adult.CNhs10469.59-29C14.35
testis, adult.CNhs10504.57-7G519.17
testis, embryo E13.CNhs11031.389-23F57.48
testis, embryo E15.CNhs11034.443-27C55.63
testis, embryo E16.CNhs11033.470-26G57.58
testis, embryo E17.CNhs11029.486-18I55.81
testis, embryo E18.CNhs11027.503-18G56.25
testis, neonate N00.CNhs11189.1300-22B76.92
testis, neonate N07.CNhs11222.726-26I48.72
testis, neonate N10.CNhs11204.763-44D910.91
testis, neonate N20.CNhs11110.839-18H314.01
testis, neonate N30.CNhs11130.1391-42E217.86
thymus, adult.CNhs10471.38-12B519.28
thymus, embryo E14.CNhs11041.402-44I44.66
thymus, embryo E15.CNhs11005.430-45I27.81
thymus, embryo E16.CNhs11002.456-26C511.17
thymus, embryo E17.CNhs10581.478-18C116.29
thymus, embryo E18.CNhs10595.1273-19G414.11
thymus, neonate N02.CNhs11181.1541-43F820.07
thymus, neonate N03.CNhs11137.2104-43C719.94
thymus, neonate N06.CNhs11197.681-26C424.23
thymus, neonate N07.CNhs11211.713-19D323.47
thymus, neonate N10.CNhs11194.748-24E424.80
thymus, neonate N20.CNhs11186.820-7A228.94
thymus, neonate N25.CNhs11125.1362-25G726.17
thymus, neonate N30.CNhs11132.1393-42G231.32
tongue, adult.CNhs10499.32-1B47.94
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H38.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F77.72
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G57.89
urinary bladder, adult.CNhs10481.879-12E48.89
uterus, adult pregnant day19.CNhs10497.590-15F56.94
uterus, adult.CNhs10509.92-27E59.71
vagina, adult.CNhs10502.89-27D59.65
vesicular gland, adult.CNhs10491.51-27F811.54
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A16.78
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A28.29
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A36.30
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.98
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A413.70
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A57.55
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A65.40
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A77.21
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.98
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A913.46
whole body, embryo E11.CNhs11014.324-5I86.33
whole body, embryo E12.CNhs10587.857-27C93.19
whole body, embryo E13.CNhs10512.372-23H25.46
whole body, embryo E14.5.CNhs10578.420-27D25.11
whole body, embryo E14.CNhs10519.395-14B16.08
whole body, embryo E16.CNhs10514.453-14F24.78
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G58.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G58.65
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G55.46
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G57.08
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G57.10
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G54.72
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G57.12
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G58.07
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G56.49
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G56.19
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G58.58
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G58.49
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G55.77
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G56.62
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G57.54
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G56.57
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G56.68
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G57.41
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G55.93
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G58.21
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G55.85
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G55.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G510.59
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G57.86
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G57.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G56.70
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G55.32
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G56.82
whole body, embryo E17.5.CNhs10513.490-9F98.10
whole body, embryo E17.CNhs10517.475-3I58.49
whole body, embryo E18.CNhs10516.493-3B35.15
whole body, neonate N00.CNhs10525.657-19C26.02
whole body, neonate N01.CNhs10576.659-23C67.46
whole body, neonate N06.CNhs10515.692-21D14.85
whole body, neonate N10.CNhs10518.761-6B43.25





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
mixed endoderm/mesoderm-derived structure7.75e-1135
hemopoietic organ4.55e-1029
immune organ4.55e-1029
thymus5.06e-0923
neck5.06e-0923
respiratory system epithelium5.06e-0923
hemolymphoid system gland5.06e-0923
pharyngeal epithelium5.06e-0923
thymic region5.06e-0923
pharyngeal gland5.06e-0923
entire pharyngeal arch endoderm5.06e-0923
thymus primordium5.06e-0923
early pharyngeal endoderm5.06e-0923
pharynx5.54e-0924
upper respiratory tract5.54e-0924
chordate pharynx5.54e-0924
pharyngeal arch system5.54e-0924
pharyngeal region of foregut5.54e-0924
gland of gut4.05e-0824
endoderm-derived structure4.94e-08118
endoderm4.94e-08118
presumptive endoderm4.94e-08118
digestive system8.40e-08116
digestive tract8.40e-08116
primitive gut8.40e-08116
intestine3.19e-0731
subdivision of digestive tract3.22e-07114
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