FFCP PHASE1:Mm9::chr9:64233453..64233464,+: Difference between revisions
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{{FFCP|EntrezGene=214058|HGNC=|MCL_coexpression_id=401|UniProt=Q80T91,E9Q918|association_with_transcript=20bp_to_ENSMUST00000093829,ENSMUST00000118485,ENSMUST00000164113,NM_001134399,NM_172522,uc009qby.2,uc009qbz.2,uc009qca.2,uc012gvd.1,uc012gve.1_5end|description=CAGE_peak_2_at_Megf11_5end|id=chr9:64233453..64233464,+|ontology_enrichment_celltype=CL:0000540!1.52e-14!33;CL:0000047!1.52e-14!33;CL:0000031!1.52e-14!33;CL:0000404!1.52e-14!33;CL:0000117!1.55e-14!23;CL:0000337!1.55e-14!23;CL:0002319!6.94e-11!43;CL:0000221!2.84e-10!44;CL:0000133!2.84e-10!44;CL:0000393!6.20e-10!39;CL:0000211!6.20e-10!39;CL:0000055!2.96e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,3.13e-22,23;CL:0000337,3.13e-22,23;CL:0000540,1.72e-15,33;CL:0000047,1.72e-15,33;CL:0000031,1.72e-15,33;CL:0000404,1.72e-15,33;CL:0000393,2.68e-12,39;CL:0000211,2.68e-12,39;CL:0002319,6.65e-12,43;CL:0000221,1.64e-11,44;CL:0000133,1.64e-11,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.67e-29!73;UBERON:0005743!1.67e-29!73;UBERON:0000073!2.69e-28!75;UBERON:0001016!2.69e-28!75;UBERON:0002346!3.01e-26!71;UBERON:0003075!3.01e-26!71;UBERON:0007284!3.01e-26!71;UBERON:0004121!1.10e-25!102;UBERON:0000924!1.10e-25!102;UBERON:0006601!1.10e-25!102;UBERON:0001049!2.81e-24!52;UBERON:0005068!2.81e-24!52;UBERON:0006241!2.81e-24!52;UBERON:0007135!2.81e-24!52;UBERON:0002616!8.68e-22!49;UBERON:0000955!8.84e-22!50;UBERON:0006238!8.84e-22!50;UBERON:0000033!9.67e-21!63;UBERON:0003056!2.10e-19!49;UBERON:0003080!6.96e-18!40;UBERON:0002780!3.93e-17!39;UBERON:0001890!3.93e-17!39;UBERON:0006240!3.93e-17!39;UBERON:0002020!6.84e-16!34;UBERON:0002791!2.90e-12!29;UBERON:0003528!2.90e-12!29;UBERON:0001893!2.90e-12!29;UBERON:0007811!2.99e-12!86;UBERON:0000153!5.02e-10!94;UBERON:0000956!1.07e-07!21;UBERON:0001869!1.07e-07!21;UBERON:0000203!1.07e-07!21;UBERON:0003076!5.32e-07!12;UBERON:0003057!5.32e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.72e-39,54;UBERON:0001017,6.79e-38,73;UBERON:0001016,1.38e-36,75;UBERON:0001049,4.11e-36,52;UBERON:0005068,4.11e-36,52;UBERON:0006241,4.11e-36,52;UBERON:0007135,4.11e-36,52;UBERON:0002346,8.57e-33,64;UBERON:0003075,8.57e-33,64;UBERON:0007284,8.57e-33,64;UBERON:0004121,1.66e-29,95;UBERON:0000924,1.66e-29,95;UBERON:0006601,1.66e-29,95;UBERON:0010371,1.75e-27,73;UBERON:0002616,1.65e-26,46;UBERON:0000955,9.05e-26,47;UBERON:0006238,9.05e-26,47;UBERON:0003080,3.07e-22,40;UBERON:0002020,7.29e-22,34;UBERON:0010314,4.79e-21,92;UBERON:0002780,9.31e-21,39;UBERON:0001890,9.31e-21,39;UBERON:0006240,9.31e-21,39;UBERON:0003056,6.50e-20,49;UBERON:0003076,8.38e-15,12;UBERON:0003057,8.38e-15,12;UBERON:0003528,1.51e-14,29;UBERON:0002791,1.51e-14,29;UBERON:0001893,1.51e-14,29;UBERON:0002420,1.39e-12,8;UBERON:0007245,1.39e-12,8;UBERON:0010009,1.39e-12,8;UBERON:0010011,1.39e-12,8;UBERON:0000454,1.39e-12,8;UBERON:0002240,7.72e-12,6;UBERON:0005174,7.72e-12,6;UBERON:0001137,7.72e-12,6;UBERON:0000025,2.84e-11,114;UBERON:0001948,2.92e-10,5;UBERON:0002315,2.92e-10,5;UBERON:0004111,6.22e-10,122;UBERON:0002950,4.69e-08,4;UBERON:0001891,4.69e-08,4;UBERON:0009616,4.69e-08,4;UBERON:0010286,4.69e-08,4;UBERON:0000369,7.08e-08,5;UBERON:0002435,7.08e-08,5;UBERON:0000204,7.08e-08,5;UBERON:0010082,7.08e-08,5;UBERON:0011216,2.17e-07,194;UBERON:0002021,2.48e-07,10;UBERON:0000411,2.48e-07,10;UBERON:0001950,2.48e-07,10;UBERON:0001894,3.17e-07,10;UBERON:0006222,3.17e-07,10|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0.279972843250725,0,0,0,0,0,0,0,5.86717736492834,4.23192783417626,3.1691570175309,0.338844532069132,0,0,0,0,1.49800055259202,0.384218305321555,0.829516898467821,0.810035629990144,0.420649922702764,9.42648248532552,5.30084498283872,0.857435594504678,0.575072826109418,1.83843757322004,6.60695285996332,3.19218345212969,3.84016333140609,3.56092976871523,2.10421580285542,2.6045668527838,4.18774498502071,5.06486349028512,3.51435969886663,7.66034322231536,5.12538050876771,4.84638559145781,0,0.0755715601067855,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0.216491041011214,0.253359865475099,0,0.22836775943812,0,0.29688427812965,0.693941307064543,3.04465478312141,0.461230994512117,0,0.705532242814229,0,0.247194967734374,0,0,0.485300549842228,0,0.484875253135222,0,15.2246014446005,20.7352239745321,0,0,0,0,5.54225365797844,3.20250421973039,1.00523481690292,4.17178368461463,3.06858548796397,3.74018480207208,4.05603157669394,0,0,0,0.420883711772948,0,0.229902104433473,0.360124259610698,0.90422890701429,1.15662048557257,0.896796041993948,0.843315521037559,2.32833033665114,0,0,0,0,0.278047249225598,0.348252166522167,0,0,0,0,0,0,0,0,0.23674473558521,0.196764231747404,0,0,0,0,0,0.164167464079095,0.162137619091711,0.146199987425332,0,0,3.15434922846191,0.823236899034275,0,0,0,0.232236671860439,0.128867461322093,0,0,0,0,0.164698954724011,0,0,0,0,0,0.199141273254367,0,0.913988100877831,0,0.610953983535943,0.387904974335251,0.771494018793504,0.252946148497029,0,0.156998727841375,0,0.296452627087149,0.166845105716094,0.589676985339609,0,0.202860121388503,0.241177159752417,0.50925170356284,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.162964976442026,0.509235257325564,0,0.167506257441816,0,0,0.472905432318573,0.664394068946325,0.797273843287435,0.327726629431476,0.518054945597687,0.144649058581512,0,0,0,0,3.69266356971921,2.69586879162067,0,0,0.315508219416257,1.17131623288992,0.215423397732799,0.477937595905104,0.668396022247182,0.283076530788832,0.404810701674894,0.292255857911312,0.395287777946524,0.321321316421807,0,0.178065603667255,0,0,0,0.728341908464944,0.906970670894253,0.377210159511796,0,0,0,0,0,0,0,0,3.74483566329167,0.36012218806262,0.776152102696527,1.71469628025274,1.95074257006501,1.60531935841864,0.822745103010605,2.13125464380219,0,2.96564899209348,0.661585194164886,0,0.322928853391811,0.0603129249281559,0,0.328281799490123,0,4.07935664423121,0,0.82554747185289,0.370389054739423,0.188368457004691,0.136694227721025,0,0,0,0,0,0.158167996790568,0.609958401380546,0.108005340821801,0.209088296014469,0,0.404593039154462,0.247960367176008,0.26175594198403,0,0,0,0.448549638131936,0,0.194451188344048,0.387479470433193,0.506868376472335,0.117357238645754,0,0.314578033277133,0.241584120826006,0,0,0.202725215290164,0.205421914329655,0.129920822977795,0.179026695667481,0.596044064343795,0.120195449519969,0.147689527174577,0.100966449948148,0.0762068066549998,0,0,0.0962118416403295,0,0,0,0,0.167884616364078,0,0.187682475451182,0.73260649706906,0,0,0.564751842617067,1.38097570952153,2.29158205375759,3.78077001156113,3.42541259885321,5.2877572817279,1.35004500046361,0.45032120322422,0.906284817968409,3.10656187051092,0.207574695168353,0.399024873401031,1.87806966329548,0.972426868273176,0.419226325255965,0.551530525350042,0.44449345560323,1.03017528619447,0,0.252697211763798,0.760437899670719,0.188626341386076,0.37456602987953,0.768301828858431,0.17230640686684,0.476293691283074,0.347652977834566,0.578727661391115,1.23625770240992,0.735994600671987,0.685738504770831,0.70990322463735,0.476872379894642,0.872078499793971,0.282328141245992,0.507687647350059,0.182927972872773,0.526139422875686,0.271608227691724,1.12228454331548,0,0.788035859004508,1.22769312950907,0.77468420592983,0.771626443924566,0.749431733813838,0.467863216890817,0.644613162144895,0.57386499620653,0,0.231867835620421|short_description=p2@Megf11}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:214058 | |||
|HGNC= | |||
|MCL_coexpression_id=401 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q80T91,uniprot:E9Q918 | |||
|association_with_transcript=20bp_to_ENSMUST00000093829,ENSMUST00000118485,ENSMUST00000164113,NM_001134399,NM_172522,uc009qby.2,uc009qbz.2,uc009qca.2,uc012gvd.1,uc012gve.1_5end | |||
|cluster_id=chr9:64233453..64233464,+ | |||
|description=CAGE_peak_2_at_Megf11_5end | |||
|id=chr9:64233453..64233464,+ | |||
|ontology_enrichment_celltype=CL:0000540!1.52e-14!33;CL:0000047!1.52e-14!33;CL:0000031!1.52e-14!33;CL:0000404!1.52e-14!33;CL:0000117!1.55e-14!23;CL:0000337!1.55e-14!23;CL:0002319!6.94e-11!43;CL:0000221!2.84e-10!44;CL:0000133!2.84e-10!44;CL:0000393!6.20e-10!39;CL:0000211!6.20e-10!39;CL:0000055!2.96e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.13e-22,23;CL:0000337,3.13e-22,23;CL:0000540,1.72e-15,33;CL:0000047,1.72e-15,33;CL:0000031,1.72e-15,33;CL:0000404,1.72e-15,33;CL:0000393,2.68e-12,39;CL:0000211,2.68e-12,39;CL:0002319,6.65e-12,43;CL:0000221,1.64e-11,44;CL:0000133,1.64e-11,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.67e-29!73;UBERON:0005743!1.67e-29!73;UBERON:0000073!2.69e-28!75;UBERON:0001016!2.69e-28!75;UBERON:0002346!3.01e-26!71;UBERON:0003075!3.01e-26!71;UBERON:0007284!3.01e-26!71;UBERON:0004121!1.10e-25!102;UBERON:0000924!1.10e-25!102;UBERON:0006601!1.10e-25!102;UBERON:0001049!2.81e-24!52;UBERON:0005068!2.81e-24!52;UBERON:0006241!2.81e-24!52;UBERON:0007135!2.81e-24!52;UBERON:0002616!8.68e-22!49;UBERON:0000955!8.84e-22!50;UBERON:0006238!8.84e-22!50;UBERON:0000033!9.67e-21!63;UBERON:0003056!2.10e-19!49;UBERON:0003080!6.96e-18!40;UBERON:0002780!3.93e-17!39;UBERON:0001890!3.93e-17!39;UBERON:0006240!3.93e-17!39;UBERON:0002020!6.84e-16!34;UBERON:0002791!2.90e-12!29;UBERON:0003528!2.90e-12!29;UBERON:0001893!2.90e-12!29;UBERON:0007811!2.99e-12!86;UBERON:0000153!5.02e-10!94;UBERON:0000956!1.07e-07!21;UBERON:0001869!1.07e-07!21;UBERON:0000203!1.07e-07!21;UBERON:0003076!5.32e-07!12;UBERON:0003057!5.32e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.72e-39,54;UBERON:0001017,6.79e-38,73;UBERON:0001016,1.38e-36,75;UBERON:0001049,4.11e-36,52;UBERON:0005068,4.11e-36,52;UBERON:0006241,4.11e-36,52;UBERON:0007135,4.11e-36,52;UBERON:0002346,8.57e-33,64;UBERON:0003075,8.57e-33,64;UBERON:0007284,8.57e-33,64;UBERON:0004121,1.66e-29,95;UBERON:0000924,1.66e-29,95;UBERON:0006601,1.66e-29,95;UBERON:0010371,1.75e-27,73;UBERON:0002616,1.65e-26,46;UBERON:0000955,9.05e-26,47;UBERON:0006238,9.05e-26,47;UBERON:0003080,3.07e-22,40;UBERON:0002020,7.29e-22,34;UBERON:0010314,4.79e-21,92;UBERON:0002780,9.31e-21,39;UBERON:0001890,9.31e-21,39;UBERON:0006240,9.31e-21,39;UBERON:0003056,6.50e-20,49;UBERON:0003076,8.38e-15,12;UBERON:0003057,8.38e-15,12;UBERON:0003528,1.51e-14,29;UBERON:0002791,1.51e-14,29;UBERON:0001893,1.51e-14,29;UBERON:0002420,1.39e-12,8;UBERON:0007245,1.39e-12,8;UBERON:0010009,1.39e-12,8;UBERON:0010011,1.39e-12,8;UBERON:0000454,1.39e-12,8;UBERON:0002240,7.72e-12,6;UBERON:0005174,7.72e-12,6;UBERON:0001137,7.72e-12,6;UBERON:0000025,2.84e-11,114;UBERON:0001948,2.92e-10,5;UBERON:0002315,2.92e-10,5;UBERON:0004111,6.22e-10,122;UBERON:0002950,4.69e-08,4;UBERON:0001891,4.69e-08,4;UBERON:0009616,4.69e-08,4;UBERON:0010286,4.69e-08,4;UBERON:0000369,7.08e-08,5;UBERON:0002435,7.08e-08,5;UBERON:0000204,7.08e-08,5;UBERON:0010082,7.08e-08,5;UBERON:0011216,2.17e-07,194;UBERON:0002021,2.48e-07,10;UBERON:0000411,2.48e-07,10;UBERON:0001950,2.48e-07,10;UBERON:0001894,3.17e-07,10;UBERON:0006222,3.17e-07,10 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0.279972843250725,0,0,0,0,0,0,0,5.86717736492834,4.23192783417626,3.1691570175309,0.338844532069132,0,0,0,0,1.49800055259202,0.384218305321555,0.829516898467821,0.810035629990144,0.420649922702764,9.42648248532552,5.30084498283872,0.857435594504678,0.575072826109418,1.83843757322004,6.60695285996332,3.19218345212969,3.84016333140609,3.56092976871523,2.10421580285542,2.6045668527838,4.18774498502071,5.06486349028512,3.51435969886663,7.66034322231536,5.12538050876771,4.84638559145781,0,0.0755715601067855,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0.216491041011214,0.253359865475099,0,0.22836775943812,0,0.29688427812965,0.693941307064543,3.04465478312141,0.461230994512117,0,0.705532242814229,0,0.247194967734374,0,0,0.485300549842228,0,0.484875253135222,0,15.2246014446005,20.7352239745321,0,0,0,0,5.54225365797844,3.20250421973039,1.00523481690292,4.17178368461463,3.06858548796397,3.74018480207208,4.05603157669394,0,0,0,0.420883711772948,0,0.229902104433473,0.360124259610698,0.90422890701429,1.15662048557257,0.896796041993948,0.843315521037559,2.32833033665114,0,0,0,0,0.278047249225598,0.348252166522167,0,0,0,0,0,0,0,0,0.23674473558521,0.196764231747404,0,0,0,0,0,0.164167464079095,0.162137619091711,0.146199987425332,0,0,3.15434922846191,0.823236899034275,0,0,0,0.232236671860439,0.128867461322093,0,0,0,0,0.164698954724011,0,0,0,0,0,0.199141273254367,0,0.913988100877831,0,0.610953983535943,0.387904974335251,0.771494018793504,0.252946148497029,0,0.156998727841375,0,0.296452627087149,0.166845105716094,0.589676985339609,0,0.202860121388503,0.241177159752417,0.50925170356284,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.162964976442026,0.509235257325564,0,0.167506257441816,0,0,0.472905432318573,0.664394068946325,0.797273843287435,0.327726629431476,0.518054945597687,0.144649058581512,0,0,0,0,3.69266356971921,2.69586879162067,0,0,0.315508219416257,1.17131623288992,0.215423397732799,0.477937595905104,0.668396022247182,0.283076530788832,0.404810701674894,0.292255857911312,0.395287777946524,0.321321316421807,0,0.178065603667255,0,0,0,0.728341908464944,0.906970670894253,0.377210159511796,0,0,0,0,0,0,0,0,3.74483566329167,0.36012218806262,0.776152102696527,1.71469628025274,1.95074257006501,1.60531935841864,0.822745103010605,2.13125464380219,0,2.96564899209348,0.661585194164886,0,0.322928853391811,0.0603129249281559,0,0.328281799490123,0,4.07935664423121,0,0.82554747185289,0.370389054739423,0.188368457004691,0.136694227721025,0,0,0,0,0,0.158167996790568,0.609958401380546,0.108005340821801,0.209088296014469,0,0.404593039154462,0.247960367176008,0.26175594198403,0,0,0,0.448549638131936,0,0.194451188344048,0.387479470433193,0.506868376472335,0.117357238645754,0,0.314578033277133,0.241584120826006,0,0,0.202725215290164,0.205421914329655,0.129920822977795,0.179026695667481,0.596044064343795,0.120195449519969,0.147689527174577,0.100966449948148,0.0762068066549998,0,0,0.0962118416403295,0,0,0,0,0.167884616364078,0,0.187682475451182,0.73260649706906,0,0,0.564751842617067,1.38097570952153,2.29158205375759,3.78077001156113,3.42541259885321,5.2877572817279,1.35004500046361,0.45032120322422,0.906284817968409,3.10656187051092,0.207574695168353,0.399024873401031,1.87806966329548,0.972426868273176,0.419226325255965,0.551530525350042,0.44449345560323,1.03017528619447,0,0.252697211763798,0.760437899670719,0.188626341386076,0.37456602987953,0.768301828858431,0.17230640686684,0.476293691283074,0.347652977834566,0.578727661391115,1.23625770240992,0.735994600671987,0.685738504770831,0.70990322463735,0.476872379894642,0.872078499793971,0.282328141245992,0.507687647350059,0.182927972872773,0.526139422875686,0.271608227691724,1.12228454331548,0,0.788035859004508,1.22769312950907,0.77468420592983,0.771626443924566,0.749431733813838,0.467863216890817,0.644613162144895,0.57386499620653,0,0.231867835620421 | |||
|short_description=p2@Megf11 | |||
}} |
Revision as of 11:41, 5 August 2015
Short description: | p2@Megf11 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Megf11_5end |
Coexpression cluster: | MCL_coexpression_mm9:401 |
Association with transcript: | 20bp_to_ENSMUST00000093829, ENSMUST00000118485, ENSMUST00000164113, NM_001134399, NM_172522, uc009qby.2, uc009qbz.2, uc009qca.2, uc012gvd.1, uc012gve.1_5end |
EntrezGene: | 214058 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.13e-22 | 23 |
neuroblast (sensu Vertebrata) | 3.13e-22 | 23 |
neuron | 1.72e-15 | 33 |
neuronal stem cell | 1.72e-15 | 33 |
neuroblast | 1.72e-15 | 33 |
electrically signaling cell | 1.72e-15 | 33 |
electrically responsive cell | 2.68e-12 | 39 |
electrically active cell | 2.68e-12 | 39 |
neural cell | 6.65e-12 | 43 |
ectodermal cell | 1.64e-11 | 44 |
neurectodermal cell | 1.64e-11 | 44 |