FFCP PHASE1:Mm9::chr15:74762686..74762708,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=3|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr15:74762686..74762708,+|id=chr15:74762686..74762708,+|ontology_enrichment_celltype=CL:0000553!8.48e-07!6;CL:0000556!8.48e-07!6|ontology_enrichment_celltype_v019_2=CL:0000553,9.27e-15,6;CL:0000556,9.27e-15,6;CL:0000050,1.44e-09,9;CL:0002027,5.33e-08,3;CL:0002006,5.33e-08,3;CL:0002024,5.33e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,1.02e-08,3;DOID:4045,1.02e-08,3|ontology_enrichment_uberon=UBERON:0002405!2.43e-15!70;UBERON:0005057!2.70e-12!51;UBERON:0002390!3.03e-12!45;UBERON:0003061!3.03e-12!45;UBERON:0000077!3.95e-12!97;UBERON:0002193!6.15e-12!48;UBERON:0001041!1.15e-11!92;UBERON:0003104!4.86e-11!131;UBERON:0009142!4.86e-11!131;UBERON:0000926!2.19e-10!193;UBERON:0004120!2.19e-10!193;UBERON:0006603!2.19e-10!193;UBERON:0001004!6.79e-10!42;UBERON:0004177!1.90e-09!29;UBERON:0000065!2.51e-09!41;UBERON:0004921!2.43e-08!126;UBERON:0004185!2.43e-08!126;UBERON:0005911!3.26e-08!69;UBERON:0001007!6.33e-08!128;UBERON:0001555!6.33e-08!128;UBERON:0007026!6.33e-08!128;UBERON:0004119!1.58e-07!130;UBERON:0000925!1.58e-07!130;UBERON:0006595!1.58e-07!130;UBERON:0000072!2.10e-07!27;UBERON:0003081!9.15e-07!88|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.22e-14,48;UBERON:0002405,1.22e-14,48;UBERON:0002390,4.66e-14,45;UBERON:0003061,4.66e-14,45;UBERON:0004177,4.45e-10,29;UBERON:0005057,4.45e-10,29;UBERON:0003081,1.09e-09,87;UBERON:0003408,7.63e-09,24;UBERON:0002204,8.97e-09,32;UBERON:0000926,4.40e-08,120;UBERON:0004120,4.40e-08,120;UBERON:0006603,4.40e-08,120;UBERON:0000077,6.96e-08,35;UBERON:0002370,1.04e-07,23;UBERON:0000974,1.04e-07,23;UBERON:0004807,1.04e-07,23;UBERON:0005058,1.04e-07,23;UBERON:0003351,1.04e-07,23;UBERON:0009113,1.04e-07,23;UBERON:0003295,1.04e-07,23;UBERON:0009722,1.04e-07,23;UBERON:0005562,1.04e-07,23;UBERON:0007690,1.04e-07,23;UBERON:0000072,1.39e-07,27;UBERON:0001474,1.79e-07,22;UBERON:0004765,1.79e-07,22;UBERON:0001434,1.79e-07,22;UBERON:0006562,2.60e-07,24;UBERON:0001557,2.60e-07,24;UBERON:0001042,2.60e-07,24;UBERON:0008814,2.60e-07,24;UBERON:0009145,2.60e-07,24|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.171217968225505,0,0.856003649656029,0,3.33109761815663,2.63217847606774,3.49780939064073,10.0947892914636,8.91243818437302,5.94145512517242,0,0.695036658406197,1.30599894569468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,30.5528090437943,21.8773896466664,25.6526634547161,29.4115744015507,28.0048648832963,22.8189865924642,0,0,0,0,0,0,0,0,0,2.34895648480831,0,0,0,0,0,0,0,0,0,0,0.449949858640699,0,0.7104801149461,0,0.384218305321555,0,0.135005938331691,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0.289864488701678,0,0,0,0.649776417447669,0,0,0,0,0,0,0,0,0,0.216491041011214,0.253359865475099,1.01104889002957,0,8.80388804400384,0,0,0,0,0.150722640552623,0,0,0,0.578397427679647,5.30766331169925,0,1.54589062922275,2.90925151881133,0,0.292780797011547,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36847667671102,2.27450482590307,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0.268273401399619,0.116765342367169,0,0,0.162137619091711,0,0.219550115291051,0,0,0,0,0,0,0,0,0.201683524623343,0,0.190225626112559,0,0,0.251335208800269,0.198956472041151,0.19496408711912,0,0.216138049874694,0,0,0,0,0,0.193952487167626,0,0,0,0,0.246794327843601,0.296452627087149,0,0.196558995113203,0.224862112384854,0.608580364165509,0,0.50925170356284,0.287696137450811,1.13494658742525,0.274561413188081,1.43768206527355,0.744281895337007,0.624075346229121,0.252578877947112,0.358794827043824,0,1.10851914099963,0,0,0,0,0.167506257441816,0.238043640886014,0.195133647857799,0.315270288212382,0.664394068946325,0.478364305972461,0.327726629431476,0.863424909329478,0.289298117163023,0,0,0.491764273019036,0.827810238914197,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,1.48397627647332,0.161464426695906,0,0,0,0.582961673259701,0.18542530201051,2.56306321196779,0.82554747185289,1.29636169158798,0.565105371014073,0.820165366326151,1.83022538565218,0.169978429993855,0.279902904647316,0.138199973804424,0,0,0,0.216010681643603,0.209088296014469,0,0,0.0826534557253359,0.523511883968059,0,1.24267862617385,0,0,0,0.194451188344048,0.258319646955462,0,0,0,0,0,0,3.16011120628178,0.202725215290164,0.410843828659309,0.389762468933385,0.537080087002444,1.19208812868759,1.56254084375959,1.03382669022204,1.61546319917036,1.5241361331,1.61321896218945,1.55932609183604,2.02044867444692,2.57129184799452,0.226730383615211,0,0,0,0.386379188064381,0.563047426353546,0.183151624267265,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0.685738504770831,0.177475806159338,0.238436189947321,0.145346416632329,0.0941093804153306,0,0,0,0.135804113845862,0,0,0.197008964751127,0,0.154936841185966,0,0,0.467863216890817,0,0,0.441182838239031,1.85494268496337|short_description=p@chr15:74762686..74762708,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=3 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr15:74762686..74762708,+ | |||
|description=CAGE_peak_at_chr15:74762686..74762708,+ | |||
|id=chr15:74762686..74762708,+ | |||
|ontology_enrichment_celltype=CL:0000553!8.48e-07!6;CL:0000556!8.48e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,9.27e-15,6;CL:0000556,9.27e-15,6;CL:0000050,1.44e-09,9;CL:0002027,5.33e-08,3;CL:0002006,5.33e-08,3;CL:0002024,5.33e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.02e-08,3;DOID:4045,1.02e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0002405!2.43e-15!70;UBERON:0005057!2.70e-12!51;UBERON:0002390!3.03e-12!45;UBERON:0003061!3.03e-12!45;UBERON:0000077!3.95e-12!97;UBERON:0002193!6.15e-12!48;UBERON:0001041!1.15e-11!92;UBERON:0003104!4.86e-11!131;UBERON:0009142!4.86e-11!131;UBERON:0000926!2.19e-10!193;UBERON:0004120!2.19e-10!193;UBERON:0006603!2.19e-10!193;UBERON:0001004!6.79e-10!42;UBERON:0004177!1.90e-09!29;UBERON:0000065!2.51e-09!41;UBERON:0004921!2.43e-08!126;UBERON:0004185!2.43e-08!126;UBERON:0005911!3.26e-08!69;UBERON:0001007!6.33e-08!128;UBERON:0001555!6.33e-08!128;UBERON:0007026!6.33e-08!128;UBERON:0004119!1.58e-07!130;UBERON:0000925!1.58e-07!130;UBERON:0006595!1.58e-07!130;UBERON:0000072!2.10e-07!27;UBERON:0003081!9.15e-07!88 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.22e-14,48;UBERON:0002405,1.22e-14,48;UBERON:0002390,4.66e-14,45;UBERON:0003061,4.66e-14,45;UBERON:0004177,4.45e-10,29;UBERON:0005057,4.45e-10,29;UBERON:0003081,1.09e-09,87;UBERON:0003408,7.63e-09,24;UBERON:0002204,8.97e-09,32;UBERON:0000926,4.40e-08,120;UBERON:0004120,4.40e-08,120;UBERON:0006603,4.40e-08,120;UBERON:0000077,6.96e-08,35;UBERON:0002370,1.04e-07,23;UBERON:0000974,1.04e-07,23;UBERON:0004807,1.04e-07,23;UBERON:0005058,1.04e-07,23;UBERON:0003351,1.04e-07,23;UBERON:0009113,1.04e-07,23;UBERON:0003295,1.04e-07,23;UBERON:0009722,1.04e-07,23;UBERON:0005562,1.04e-07,23;UBERON:0007690,1.04e-07,23;UBERON:0000072,1.39e-07,27;UBERON:0001474,1.79e-07,22;UBERON:0004765,1.79e-07,22;UBERON:0001434,1.79e-07,22;UBERON:0006562,2.60e-07,24;UBERON:0001557,2.60e-07,24;UBERON:0001042,2.60e-07,24;UBERON:0008814,2.60e-07,24;UBERON:0009145,2.60e-07,24 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.171217968225505,0,0.856003649656029,0,3.33109761815663,2.63217847606774,3.49780939064073,10.0947892914636,8.91243818437302,5.94145512517242,0,0.695036658406197,1.30599894569468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,30.5528090437943,21.8773896466664,25.6526634547161,29.4115744015507,28.0048648832963,22.8189865924642,0,0,0,0,0,0,0,0,0,2.34895648480831,0,0,0,0,0,0,0,0,0,0,0.449949858640699,0,0.7104801149461,0,0.384218305321555,0,0.135005938331691,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0.289864488701678,0,0,0,0.649776417447669,0,0,0,0,0,0,0,0,0,0.216491041011214,0.253359865475099,1.01104889002957,0,8.80388804400384,0,0,0,0,0.150722640552623,0,0,0,0.578397427679647,5.30766331169925,0,1.54589062922275,2.90925151881133,0,0.292780797011547,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36847667671102,2.27450482590307,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0.268273401399619,0.116765342367169,0,0,0.162137619091711,0,0.219550115291051,0,0,0,0,0,0,0,0,0.201683524623343,0,0.190225626112559,0,0,0.251335208800269,0.198956472041151,0.19496408711912,0,0.216138049874694,0,0,0,0,0,0.193952487167626,0,0,0,0,0.246794327843601,0.296452627087149,0,0.196558995113203,0.224862112384854,0.608580364165509,0,0.50925170356284,0.287696137450811,1.13494658742525,0.274561413188081,1.43768206527355,0.744281895337007,0.624075346229121,0.252578877947112,0.358794827043824,0,1.10851914099963,0,0,0,0,0.167506257441816,0.238043640886014,0.195133647857799,0.315270288212382,0.664394068946325,0.478364305972461,0.327726629431476,0.863424909329478,0.289298117163023,0,0,0.491764273019036,0.827810238914197,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,1.48397627647332,0.161464426695906,0,0,0,0.582961673259701,0.18542530201051,2.56306321196779,0.82554747185289,1.29636169158798,0.565105371014073,0.820165366326151,1.83022538565218,0.169978429993855,0.279902904647316,0.138199973804424,0,0,0,0.216010681643603,0.209088296014469,0,0,0.0826534557253359,0.523511883968059,0,1.24267862617385,0,0,0,0.194451188344048,0.258319646955462,0,0,0,0,0,0,3.16011120628178,0.202725215290164,0.410843828659309,0.389762468933385,0.537080087002444,1.19208812868759,1.56254084375959,1.03382669022204,1.61546319917036,1.5241361331,1.61321896218945,1.55932609183604,2.02044867444692,2.57129184799452,0.226730383615211,0,0,0,0.386379188064381,0.563047426353546,0.183151624267265,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0.685738504770831,0.177475806159338,0.238436189947321,0.145346416632329,0.0941093804153306,0,0,0,0.135804113845862,0,0,0.197008964751127,0,0.154936841185966,0,0,0.467863216890817,0,0,0.441182838239031,1.85494268496337 | |||
|short_description=p@chr15:74762686..74762708,+ | |||
}} |
Latest revision as of 11:19, 5 August 2015
Short description: | p@chr15:74762686..74762708, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:74762686..74762708, + |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 9.27e-15 | 6 |
megakaryocyte | 9.27e-15 | 6 |
megakaryocyte-erythroid progenitor cell | 1.44e-09 | 9 |
CD9-positive, CD41-positive megakaryocyte cell | 5.33e-08 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 5.33e-08 | 3 |
Kit-positive megakaryocyte progenitor cell | 5.33e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.22e-14 | 48 |
immune system | 1.22e-14 | 48 |
hematopoietic system | 4.66e-14 | 45 |
blood island | 4.66e-14 | 45 |
hemopoietic organ | 4.45e-10 | 29 |
immune organ | 4.45e-10 | 29 |
lateral plate mesoderm | 1.09e-09 | 87 |
gland of gut | 7.63e-09 | 24 |
musculoskeletal system | 8.97e-09 | 32 |
mesoderm | 4.40e-08 | 120 |
mesoderm-derived structure | 4.40e-08 | 120 |
presumptive mesoderm | 4.40e-08 | 120 |
mixed endoderm/mesoderm-derived structure | 6.96e-08 | 35 |
thymus | 1.04e-07 | 23 |
neck | 1.04e-07 | 23 |
respiratory system epithelium | 1.04e-07 | 23 |
hemolymphoid system gland | 1.04e-07 | 23 |
pharyngeal epithelium | 1.04e-07 | 23 |
thymic region | 1.04e-07 | 23 |
pharyngeal gland | 1.04e-07 | 23 |
entire pharyngeal arch endoderm | 1.04e-07 | 23 |
thymus primordium | 1.04e-07 | 23 |
early pharyngeal endoderm | 1.04e-07 | 23 |
segment of respiratory tract | 1.39e-07 | 27 |
bone element | 1.79e-07 | 22 |
skeletal element | 1.79e-07 | 22 |
skeletal system | 1.79e-07 | 22 |
pharynx | 2.60e-07 | 24 |
upper respiratory tract | 2.60e-07 | 24 |
chordate pharynx | 2.60e-07 | 24 |
pharyngeal arch system | 2.60e-07 | 24 |
pharyngeal region of foregut | 2.60e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.02e-08 | 3 |
muscle cancer | 1.02e-08 | 3 |