FFCP PHASE1:Mm9::chr12:87027598..87027652,+: Difference between revisions
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{{FFCP|EntrezGene=53314|HGNC=|MCL_coexpression_id=316|UniProt=O35284|association_with_transcript=0bp_to_ENSMUST00000040536_5end|description=CAGE_peak_1_at_Batf_5end|id=chr12:87027598..87027652,+|ontology_enrichment_celltype=CL:0000988!5.22e-11!32;CL:0002032!5.22e-11!32;CL:0000037!5.22e-11!32;CL:0000566!5.22e-11!32;CL:0000837!5.22e-11!32;CL:0002320!6.54e-09!46;CL:0000134!6.54e-09!46;CL:0000738!7.27e-09!17;CL:0002087!7.27e-09!17;CL:0002031!1.36e-08!25;CL:0000838!2.52e-08!12;CL:0000084!7.55e-08!11;CL:0000827!7.55e-08!11;CL:0000542!3.54e-07!13;CL:0000051!3.54e-07!13;CL:0000219!5.33e-07!54;CL:0000791!8.38e-07!9;CL:0000789!8.38e-07!9;CL:0002420!8.38e-07!9;CL:0002419!8.38e-07!9;CL:0000790!8.38e-07!9|ontology_enrichment_celltype_v019_2=CL:0000988,1.26e-12,32;CL:0002032,1.26e-12,32;CL:0000037,1.26e-12,32;CL:0000837,1.26e-12,32;CL:0002320,2.47e-11,46;CL:0000134,2.47e-11,46;CL:0002031,5.69e-10,25;CL:0000738,1.69e-09,17;CL:0002087,1.69e-09,17;CL:0000219,2.00e-09,54;CL:0000838,6.80e-09,12;CL:0000084,2.23e-08,11;CL:0000827,2.23e-08,11;CL:0000542,1.13e-07,13;CL:0000051,1.13e-07,13;CL:0000791,3.03e-07,9;CL:0000789,3.03e-07,9;CL:0002420,3.03e-07,9;CL:0002419,3.03e-07,9;CL:0000790,3.03e-07,9;CL:0000624,9.97e-07,8|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!5.31e-17!48;UBERON:0002390!1.28e-15!45;UBERON:0003061!1.28e-15!45;UBERON:0002405!3.44e-15!70;UBERON:0000926!1.92e-10!193;UBERON:0004120!1.92e-10!193;UBERON:0006603!1.92e-10!193;UBERON:0003081!3.59e-10!88;UBERON:0001041!2.61e-09!92;UBERON:0002384!6.54e-09!46;UBERON:0002371!6.79e-09!16;UBERON:0000077!1.30e-08!97;UBERON:0001004!1.36e-08!42;UBERON:0000065!2.59e-08!41;UBERON:0004177!4.69e-08!29;UBERON:0001474!5.58e-08!22;UBERON:0004765!5.58e-08!22;UBERON:0001434!5.58e-08!22;UBERON:0002204!3.32e-07!32;UBERON:0005057!4.09e-07!51;UBERON:0003104!4.84e-07!131;UBERON:0009142!4.84e-07!131|ontology_enrichment_uberon_v019_2=UBERON:0002193,3.78e-19,48;UBERON:0002405,3.78e-19,48;UBERON:0002390,1.24e-17,45;UBERON:0003061,1.24e-17,45;UBERON:0002384,2.47e-11,46;UBERON:0003081,2.18e-10,87;UBERON:0001041,6.84e-10,80;UBERON:0002371,1.65e-09,16;UBERON:0001004,2.15e-09,42;UBERON:0004177,2.63e-09,29;UBERON:0005057,2.63e-09,29;UBERON:0000065,4.33e-09,41;UBERON:0001474,2.44e-08,22;UBERON:0004765,2.44e-08,22;UBERON:0001434,2.44e-08,22;UBERON:0002204,3.67e-08,32;UBERON:0000077,1.28e-07,35;UBERON:0003408,2.90e-07,24;UBERON:0006562,5.62e-07,24;UBERON:0001557,5.62e-07,24;UBERON:0001042,5.62e-07,24;UBERON:0008814,5.62e-07,24;UBERON:0009145,5.62e-07,24;UBERON:0002370,5.73e-07,23;UBERON:0000974,5.73e-07,23;UBERON:0004807,5.73e-07,23;UBERON:0005058,5.73e-07,23;UBERON:0003351,5.73e-07,23;UBERON:0009113,5.73e-07,23;UBERON:0003295,5.73e-07,23;UBERON:0009722,5.73e-07,23;UBERON:0005562,5.73e-07,23;UBERON:0007690,5.73e-07,23|phase1_expression=0.640595388419176,0,0,0,0,0.16787927191189,0,38.4787503855897,24.7788150986933,34.407485369333,7.19115466547121,9.57265907944037,26.1937116794745,22.3796230192633,5.3297561890506,6.07425802169478,1.39912375625629,17.6658812600613,16.0423887318714,17.8243653755173,1.7008658030214,8.83689465687879,16.194386926614,4.47978783821539,4.5881856213434,0.57423196411502,0,0,0.570070258369122,1.00812051903972,1.10865255327652,0,0,0,0,0,0,25.5304294749514,37.5040965371424,18.8468547830567,25.2939539853336,33.4692287629638,17.9638830621527,0,0,0,8.60630478782843,0,0.219686182734472,0,4.75953833526233,0,9.2280433331755,18.1340535502836,9.41062637598899,2.05807548828758,4.87106847895886,1.03134418455488,0.404632921719196,0.528990979272033,0,10.165335962074,11.5608323494448,34.1961892566932,22.7439263390404,36.2344858622511,5.39280198933128,6.14749288514487,0.311068836925433,0.270011876663381,0.630974884054146,0.285650984403804,0.220868540951614,0,0.191690942036473,0,0,0.255374676170375,0,0.131886287730194,0,0,0.837548997004143,0,0.15279824777681,0.294628585473668,0.284743361598206,0.186399445825301,2.12033341332915,0.377857800533928,11.3047150593654,4.30211938490693,0,0,0,0.448026887097336,1.40444420131752,0,0,0,0.14084341977668,0,0,0,1.5154372870785,2.02687892380079,1.01104889002957,2.05530983494308,18.9024655062435,2.07818994690755,0.520455980298408,0.304465478312141,0.691846491768175,0.452167921657868,1.05829836422134,0.628332956648377,0.988779870937496,0.578397427679647,5.30766331169925,1.7794353494215,2.42925670306433,4.363877278217,0,0.292780797011547,0.628340120440365,1.02182822083437,11.981512450592,10.7982491578813,12.4528822531603,0.299581278809645,0,0.251308704225729,0.173824320192276,0.511430914660661,0.20778804455956,0,1.42575109390443,3.4833951770826,0.758168275301024,0,0.520481771850815,1.14951052216736,0.900310649026746,0.90422890701429,0.95251098811859,0.2562274405697,0.562210347358373,0,0,0.378212160335639,0.351902248327898,1.7535658594206,1.11218899690239,2.43776516565517,1.02891068203972,1.19420560091096,20.3641824320838,11.8380037272769,10.2298859782413,1.86413195281952,0.938104239924385,1.08037236876609,1.4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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:53314 | |||
|HGNC= | |||
|MCL_coexpression_id=316 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:O35284 | |||
|association_with_transcript=0bp_to_ENSMUST00000040536_5end | |||
|cluster_id=chr12:87027598..87027652,+ | |||
|description=CAGE_peak_1_at_Batf_5end | |||
|id=chr12:87027598..87027652,+ | |||
|ontology_enrichment_celltype=CL:0000988!5.22e-11!32;CL:0002032!5.22e-11!32;CL:0000037!5.22e-11!32;CL:0000566!5.22e-11!32;CL:0000837!5.22e-11!32;CL:0002320!6.54e-09!46;CL:0000134!6.54e-09!46;CL:0000738!7.27e-09!17;CL:0002087!7.27e-09!17;CL:0002031!1.36e-08!25;CL:0000838!2.52e-08!12;CL:0000084!7.55e-08!11;CL:0000827!7.55e-08!11;CL:0000542!3.54e-07!13;CL:0000051!3.54e-07!13;CL:0000219!5.33e-07!54;CL:0000791!8.38e-07!9;CL:0000789!8.38e-07!9;CL:0002420!8.38e-07!9;CL:0002419!8.38e-07!9;CL:0000790!8.38e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.26e-12,32;CL:0002032,1.26e-12,32;CL:0000037,1.26e-12,32;CL:0000837,1.26e-12,32;CL:0002320,2.47e-11,46;CL:0000134,2.47e-11,46;CL:0002031,5.69e-10,25;CL:0000738,1.69e-09,17;CL:0002087,1.69e-09,17;CL:0000219,2.00e-09,54;CL:0000838,6.80e-09,12;CL:0000084,2.23e-08,11;CL:0000827,2.23e-08,11;CL:0000542,1.13e-07,13;CL:0000051,1.13e-07,13;CL:0000791,3.03e-07,9;CL:0000789,3.03e-07,9;CL:0002420,3.03e-07,9;CL:0002419,3.03e-07,9;CL:0000790,3.03e-07,9;CL:0000624,9.97e-07,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!5.31e-17!48;UBERON:0002390!1.28e-15!45;UBERON:0003061!1.28e-15!45;UBERON:0002405!3.44e-15!70;UBERON:0000926!1.92e-10!193;UBERON:0004120!1.92e-10!193;UBERON:0006603!1.92e-10!193;UBERON:0003081!3.59e-10!88;UBERON:0001041!2.61e-09!92;UBERON:0002384!6.54e-09!46;UBERON:0002371!6.79e-09!16;UBERON:0000077!1.30e-08!97;UBERON:0001004!1.36e-08!42;UBERON:0000065!2.59e-08!41;UBERON:0004177!4.69e-08!29;UBERON:0001474!5.58e-08!22;UBERON:0004765!5.58e-08!22;UBERON:0001434!5.58e-08!22;UBERON:0002204!3.32e-07!32;UBERON:0005057!4.09e-07!51;UBERON:0003104!4.84e-07!131;UBERON:0009142!4.84e-07!131 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,3.78e-19,48;UBERON:0002405,3.78e-19,48;UBERON:0002390,1.24e-17,45;UBERON:0003061,1.24e-17,45;UBERON:0002384,2.47e-11,46;UBERON:0003081,2.18e-10,87;UBERON:0001041,6.84e-10,80;UBERON:0002371,1.65e-09,16;UBERON:0001004,2.15e-09,42;UBERON:0004177,2.63e-09,29;UBERON:0005057,2.63e-09,29;UBERON:0000065,4.33e-09,41;UBERON:0001474,2.44e-08,22;UBERON:0004765,2.44e-08,22;UBERON:0001434,2.44e-08,22;UBERON:0002204,3.67e-08,32;UBERON:0000077,1.28e-07,35;UBERON:0003408,2.90e-07,24;UBERON:0006562,5.62e-07,24;UBERON:0001557,5.62e-07,24;UBERON:0001042,5.62e-07,24;UBERON:0008814,5.62e-07,24;UBERON:0009145,5.62e-07,24;UBERON:0002370,5.73e-07,23;UBERON:0000974,5.73e-07,23;UBERON:0004807,5.73e-07,23;UBERON:0005058,5.73e-07,23;UBERON:0003351,5.73e-07,23;UBERON:0009113,5.73e-07,23;UBERON:0003295,5.73e-07,23;UBERON:0009722,5.73e-07,23;UBERON:0005562,5.73e-07,23;UBERON:0007690,5.73e-07,23 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0.16787927191189,0,38.4787503855897,24.7788150986933,34.407485369333,7.19115466547121,9.57265907944037,26.1937116794745,22.3796230192633,5.3297561890506,6.07425802169478,1.39912375625629,17.6658812600613,16.0423887318714,17.8243653755173,1.7008658030214,8.83689465687879,16.194386926614,4.47978783821539,4.5881856213434,0.57423196411502,0,0,0.570070258369122,1.00812051903972,1.10865255327652,0,0,0,0,0,0,25.5304294749514,37.5040965371424,18.8468547830567,25.2939539853336,33.4692287629638,17.9638830621527,0,0,0,8.60630478782843,0,0.219686182734472,0,4.75953833526233,0,9.2280433331755,18.1340535502836,9.41062637598899,2.05807548828758,4.87106847895886,1.03134418455488,0.404632921719196,0.528990979272033,0,10.165335962074,11.5608323494448,34.1961892566932,22.7439263390404,36.2344858622511,5.39280198933128,6.14749288514487,0.311068836925433,0.270011876663381,0.630974884054146,0.285650984403804,0.220868540951614,0,0.191690942036473,0,0,0.255374676170375,0,0.131886287730194,0,0,0.837548997004143,0,0.15279824777681,0.294628585473668,0.284743361598206,0.186399445825301,2.12033341332915,0.377857800533928,11.3047150593654,4.30211938490693,0,0,0,0.448026887097336,1.40444420131752,0,0,0,0.14084341977668,0,0,0,1.5154372870785,2.02687892380079,1.01104889002957,2.05530983494308,18.9024655062435,2.07818994690755,0.520455980298408,0.304465478312141,0.691846491768175,0.452167921657868,1.05829836422134,0.628332956648377,0.988779870937496,0.578397427679647,5.30766331169925,1.7794353494215,2.42925670306433,4.363877278217,0,0.292780797011547,0.628340120440365,1.02182822083437,11.981512450592,10.7982491578813,12.4528822531603,0.299581278809645,0,0.251308704225729,0.173824320192276,0.511430914660661,0.20778804455956,0,1.42575109390443,3.4833951770826,0.758168275301024,0,0.520481771850815,1.14951052216736,0.900310649026746,0.90422890701429,0.95251098811859,0.2562274405697,0.562210347358373,0,0,0.378212160335639,0.351902248327898,1.7535658594206,1.11218899690239,2.43776516565517,1.02891068203972,1.19420560091096,20.3641824320838,11.8380037272769,10.2298859782413,1.86413195281952,0.938104239924385,1.08037236876609,1.42046841351126,1.57411385397923,1.23413690309903,1.39520366850245,1.07309360559848,1.5179494507732,1.31647879930784,1.31333971263276,0.486412857275134,0.584799949701329,3.07370161407471,1.47627060636409,0.630869845692382,0.308713837137853,1.65209391491899,0.528901133327089,0.213288250535234,0.464473343720877,0.644337306610467,1.00841762311671,1.55664630691409,0.190225626112559,3.32170343081158,0.988193728344065,1.50801125280162,2.78539060857611,1.55971269695296,0,1.72910439899755,0.995706366271836,0.948339504765408,0.571242563048644,1.1270773567308,1.01825663922657,0.969762435838129,1.61312385747733,0.948548056863859,0.442830443938806,0.784993639206874,0.987177311374404,1.1858105083486,1.50160595144485,1.57247196090562,2.24862112384854,2.02860121388503,1.20588579876208,2.5462585178142,3.74004978686054,3.24270453550071,2.19649130550465,5.75072826109418,2.97712758134803,2.18426371180192,1.26289438973556,0.896987067609561,0.964887042726734,5.72734889516475,1.13694847062291,0.488894929326078,1.52770577197669,0.938760993154008,3.35012514883632,3.33261097240419,5.07347484430277,6.9359463406724,7.9727288273559,5.26200736569707,6.22680595919804,7.9435091658312,6.07526046042349,4.52373851817817,13.5976420954677,2.45882136509518,1.93155722413313,0.160550589987792,0.35163505977661,0,1.76729649043061,0,0,0,0,0,0,0,0,0,0,1.27746076687442,1.95872164033981,1.14020871547503,2.47455184458803,0,0.728341908464944,0.906970670894253,2.64047111658257,1.47650946440386,2.15204603560749,1.55056975900933,1.81766864738753,1.42598951353889,2.21225730555071,1.05418608574999,2.06271086496374,0.340439605753788,1.44048875225048,2.8458910432206,0.857348140126369,0.532020700926821,2.67553226403106,1.97458824722545,2.13125464380219,1.40803024838226,0.63549621259146,0.441056796109924,1.97863503529776,0.968786560175433,0.72375509913787,0.477489376012546,0.492422699235184,1.7488850197791,0.556275906031529,10.7648654902647,5.57244543500701,4.44466865687308,2.44878994106098,4.92099219795691,10.5237959675,11.3885548095883,8.81694149639045,8.7065983496787,1.90934123603023,0.790839983952838,0.406638934253697,1.72808545314882,1.25452977608681,2.40198820120795,0.944050424693745,2.56225712748541,1.30877970992015,1.03691978633434,3.72803587852155,0.56369293868419,0.149516546043979,0.165458490457098,0.194451188344048,1.16243841129958,0.168956125490778,0.821500670520278,0.39061315453185,0.524296722128554,0,0.576060012515731,3.79213344753814,3.44632865993279,5.85452455839515,4.02754551231165,1.9692936523423,3.9736270956253,4.44723163223885,6.20296014133224,3.63479219813331,3.88654713940499,3.2264379243789,4.19068887180935,4.9068039236568,5.96072201126002,1.81384306892169,0,0,0,0.772758376128762,4.50437941082837,3.11357761254351,1.50057865355346,0,0,0.460325236507177,0,0.515559547031063,0,0,0,0.900642406448441,0,0,0.51893673792088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| |||
|short_description=p1@Batf | |||
}} |
Revision as of 10:16, 5 August 2015
Short description: | p1@Batf |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Batf_5end |
Coexpression cluster: | MCL_coexpression_mm9:316 |
Association with transcript: | 0bp_to_ENSMUST00000040536_5end |
EntrezGene: | 53314 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.26e-12 | 32 |
hematopoietic oligopotent progenitor cell | 1.26e-12 | 32 |
hematopoietic stem cell | 1.26e-12 | 32 |
hematopoietic multipotent progenitor cell | 1.26e-12 | 32 |
connective tissue cell | 2.47e-11 | 46 |
mesenchymal cell | 2.47e-11 | 46 |
hematopoietic lineage restricted progenitor cell | 5.69e-10 | 25 |
leukocyte | 1.69e-09 | 17 |
nongranular leukocyte | 1.69e-09 | 17 |
motile cell | 2.00e-09 | 54 |
lymphoid lineage restricted progenitor cell | 6.80e-09 | 12 |
T cell | 2.23e-08 | 11 |
pro-T cell | 2.23e-08 | 11 |
lymphocyte | 1.13e-07 | 13 |
common lymphoid progenitor | 1.13e-07 | 13 |
mature alpha-beta T cell | 3.03e-07 | 9 |
alpha-beta T cell | 3.03e-07 | 9 |
immature T cell | 3.03e-07 | 9 |
mature T cell | 3.03e-07 | 9 |
immature alpha-beta T cell | 3.03e-07 | 9 |
CD4-positive, alpha-beta T cell | 9.97e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 3.78e-19 | 48 |
immune system | 3.78e-19 | 48 |
hematopoietic system | 1.24e-17 | 45 |
blood island | 1.24e-17 | 45 |
connective tissue | 2.47e-11 | 46 |
lateral plate mesoderm | 2.18e-10 | 87 |
foregut | 6.84e-10 | 80 |
bone marrow | 1.65e-09 | 16 |
respiratory system | 2.15e-09 | 42 |
hemopoietic organ | 2.63e-09 | 29 |
immune organ | 2.63e-09 | 29 |
respiratory tract | 4.33e-09 | 41 |
bone element | 2.44e-08 | 22 |
skeletal element | 2.44e-08 | 22 |
skeletal system | 2.44e-08 | 22 |
musculoskeletal system | 3.67e-08 | 32 |
mixed endoderm/mesoderm-derived structure | 1.28e-07 | 35 |
gland of gut | 2.90e-07 | 24 |
pharynx | 5.62e-07 | 24 |
upper respiratory tract | 5.62e-07 | 24 |
chordate pharynx | 5.62e-07 | 24 |
pharyngeal arch system | 5.62e-07 | 24 |
pharyngeal region of foregut | 5.62e-07 | 24 |
thymus | 5.73e-07 | 23 |
neck | 5.73e-07 | 23 |
respiratory system epithelium | 5.73e-07 | 23 |
hemolymphoid system gland | 5.73e-07 | 23 |
pharyngeal epithelium | 5.73e-07 | 23 |
thymic region | 5.73e-07 | 23 |
pharyngeal gland | 5.73e-07 | 23 |
entire pharyngeal arch endoderm | 5.73e-07 | 23 |
thymus primordium | 5.73e-07 | 23 |
early pharyngeal endoderm | 5.73e-07 | 23 |