FFCP PHASE1:Mm9::chr1:173319086..173319173,+: Difference between revisions
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{{FFCP|EntrezGene=226652|HGNC=|MCL_coexpression_id=36|UniProt=Q640N3,E9QMX7|association_with_transcript=0bp_to_ENSMUST00000111282,NM_001005508,uc007doh.2,uc007doi.2_5end|description=CAGE_peak_1_at_Arhgap30_5end|id=chr1:173319086..173319173,+|ontology_enrichment_celltype=CL:0000988!2.56e-11!32;CL:0002032!2.56e-11!32;CL:0000037!2.56e-11!32;CL:0000566!2.56e-11!32;CL:0000837!2.56e-11!32;CL:0002031!2.50e-09!25;CL:0000838!2.23e-08!12;CL:0000738!2.52e-08!17;CL:0002087!2.52e-08!17;CL:0000084!9.04e-08!11;CL:0000827!9.04e-08!11;CL:0000542!1.86e-07!13;CL:0000051!1.86e-07!13|ontology_enrichment_celltype_v019_2=CL:0000988,1.01e-12,32;CL:0002032,1.01e-12,32;CL:0000037,1.01e-12,32;CL:0000837,1.01e-12,32;CL:0002031,1.29e-10,25;CL:0000838,2.95e-09,12;CL:0000738,4.84e-09,17;CL:0002087,4.84e-09,17;CL:0000084,1.43e-08,11;CL:0000827,1.43e-08,11;CL:0000542,4.72e-08,13;CL:0000051,4.72e-08,13;CL:0002320,1.09e-07,46;CL:0000134,1.09e-07,46;CL:0000791,2.18e-07,9;CL:0000789,2.18e-07,9;CL:0002420,2.18e-07,9;CL:0002419,2.18e-07,9;CL:0000790,2.18e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!1.49e-19!48;UBERON:0002405!2.80e-18!70;UBERON:0002390!3.60e-18!45;UBERON:0003061!3.60e-18!45;UBERON:0004177!2.41e-11!29;UBERON:0005057!2.62e-10!51;UBERON:0003408!3.72e-09!24;UBERON:0002370!7.88e-09!23;UBERON:0000974!7.88e-09!23;UBERON:0004807!7.88e-09!23;UBERON:0005058!7.88e-09!23;UBERON:0003351!7.88e-09!23;UBERON:0009113!7.88e-09!23;UBERON:0003295!7.88e-09!23;UBERON:0009722!7.88e-09!23;UBERON:0005562!7.88e-09!23;UBERON:0007690!7.88e-09!23;UBERON:0003081!1.76e-08!88;UBERON:0006562!2.11e-08!24;UBERON:0001557!2.11e-08!24;UBERON:0001042!2.11e-08!24;UBERON:0008814!2.11e-08!24;UBERON:0009145!2.11e-08!24;UBERON:0001041!7.99e-08!92;UBERON:0000077!8.75e-08!97;UBERON:0002371!1.17e-07!16;UBERON:0001007!3.06e-07!128;UBERON:0001555!3.06e-07!128;UBERON:0007026!3.06e-07!128;UBERON:0004119!4.45e-07!130;UBERON:0000925!4.45e-07!130;UBERON:0006595!4.45e-07!130;UBERON:0000926!6.48e-07!193;UBERON:0004120!6.48e-07!193;UBERON:0006603!6.48e-07!193;UBERON:0001474!6.86e-07!22;UBERON:0004765!6.86e-07!22;UBERON:0001434!6.86e-07!22|ontology_enrichment_uberon_v019_2=UBERON:0002193,6.30e-23,48;UBERON:0002405,6.30e-23,48;UBERON:0002390,2.37e-21,45;UBERON:0003061,2.37e-21,45;UBERON:0004177,1.38e-13,29;UBERON:0005057,1.38e-13,29;UBERON:0000077,1.95e-11,35;UBERON:0003408,4.35e-11,24;UBERON:0002370,1.02e-10,23;UBERON:0000974,1.02e-10,23;UBERON:0004807,1.02e-10,23;UBERON:0005058,1.02e-10,23;UBERON:0003351,1.02e-10,23;UBERON:0009113,1.02e-10,23;UBERON:0003295,1.02e-10,23;UBERON:0009722,1.02e-10,23;UBERON:0005562,1.02e-10,23;UBERON:0007690,1.02e-10,23;UBERON:0006562,7.78e-10,24;UBERON:0001557,7.78e-10,24;UBERON:0001042,7.78e-10,24;UBERON:0008814,7.78e-10,24;UBERON:0009145,7.78e-10,24;UBERON:0003081,3.84e-09,87;UBERON:0001041,5.83e-09,80;UBERON:0001007,1.01e-08,116;UBERON:0001555,1.01e-08,116;UBERON:0007026,1.01e-08,116;UBERON:0004119,1.18e-08,118;UBERON:0000925,1.18e-08,118;UBERON:0006595,1.18e-08,118;UBERON:0002371,1.91e-08,16;UBERON:0001004,3.71e-08,42;UBERON:0001474,3.89e-08,22;UBERON:0004765,3.89e-08,22;UBERON:0001434,3.89e-08,22;UBERON:0004921,4.17e-08,114;UBERON:0000065,8.07e-08,41;UBERON:0002384,1.09e-07,46;UBERON:0000072,1.22e-07,27|phase1_expression=0,0,0,0,0,0,0,170.055416972556,41.9550392011967,49.3876150539406,51.536608435877,53.6068908448661,174.967145989692,205.263104879806,23.6507930889121,28.5490127019655,6.99561878128147,138.645621674945,166.182693530155,134.531519619976,5.01755411891312,54.0142774532816,61.1207506585109,12.6394014006791,13.3057383018959,0,0,0,1.71021077510736,4.03248207615889,1.33038306393183,0.635030673459631,0,0,0,0,0,152.345513588234,92.1975706538085,125.122174809738,185.292918729769,191.935781273323,164.588009677561,0,0,0,0.782391344348039,0,0,0,0,0,115.937780785896,124.03692628394,123.682518084427,0.257259436035947,0.573066879877513,0,0,0,0,0,0,13.9484456178617,15.8218618010716,14.9200824138681,4.49400165777607,3.84218305321555,0.207379224616955,0,0,0.285650984403804,0.883474163806454,0,0.191690942036473,0,0,0.638436690425939,0.614426133024974,0.131886287730194,0.274462930807229,1.04182674111352,0.837548997004143,0.56276261003168,1.37518422999129,0.883885756421003,0.711858403995515,0,1.4387976733305,0,0,0.860423876981386,0,0.539703191637817,1.29955283489534,0,10.1119982494861,0,0,0,0,0,0,0,0,0,0,8.5637909789295,70.1721664683835,4.75014845007439,0.520455980298408,0.608930956624282,0.461230994512117,0.904335843315735,1.05829836422134,0.502666365318702,0.741584903203122,4.62717942143717,24.7690954545965,3.558870698843,13.6921741445444,14.0613823409214,5.59175283654366,0,0,10.7291963187608,32.5897138656103,23.9961092397363,30.1156438163163,1.19832511523858,1.37250180845588,0,1.39059456153821,1.02286182932132,1.0389402227978,0.811206315338788,0.81471491080253,17.5413828560231,1.0108910337347,0.420883711772948,0.390361328888111,0.229902104433473,0.180062129805349,0.452114453507145,0.47625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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:226652 | |||
|HGNC= | |||
|MCL_coexpression_id=36 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q640N3,uniprot:E9QMX7 | |||
|association_with_transcript=0bp_to_ENSMUST00000111282,NM_001005508,uc007doh.2,uc007doi.2_5end | |||
|cluster_id=chr1:173319086..173319173,+ | |||
|description=CAGE_peak_1_at_Arhgap30_5end | |||
|id=chr1:173319086..173319173,+ | |||
|ontology_enrichment_celltype=CL:0000988!2.56e-11!32;CL:0002032!2.56e-11!32;CL:0000037!2.56e-11!32;CL:0000566!2.56e-11!32;CL:0000837!2.56e-11!32;CL:0002031!2.50e-09!25;CL:0000838!2.23e-08!12;CL:0000738!2.52e-08!17;CL:0002087!2.52e-08!17;CL:0000084!9.04e-08!11;CL:0000827!9.04e-08!11;CL:0000542!1.86e-07!13;CL:0000051!1.86e-07!13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.01e-12,32;CL:0002032,1.01e-12,32;CL:0000037,1.01e-12,32;CL:0000837,1.01e-12,32;CL:0002031,1.29e-10,25;CL:0000838,2.95e-09,12;CL:0000738,4.84e-09,17;CL:0002087,4.84e-09,17;CL:0000084,1.43e-08,11;CL:0000827,1.43e-08,11;CL:0000542,4.72e-08,13;CL:0000051,4.72e-08,13;CL:0002320,1.09e-07,46;CL:0000134,1.09e-07,46;CL:0000791,2.18e-07,9;CL:0000789,2.18e-07,9;CL:0002420,2.18e-07,9;CL:0002419,2.18e-07,9;CL:0000790,2.18e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.49e-19!48;UBERON:0002405!2.80e-18!70;UBERON:0002390!3.60e-18!45;UBERON:0003061!3.60e-18!45;UBERON:0004177!2.41e-11!29;UBERON:0005057!2.62e-10!51;UBERON:0003408!3.72e-09!24;UBERON:0002370!7.88e-09!23;UBERON:0000974!7.88e-09!23;UBERON:0004807!7.88e-09!23;UBERON:0005058!7.88e-09!23;UBERON:0003351!7.88e-09!23;UBERON:0009113!7.88e-09!23;UBERON:0003295!7.88e-09!23;UBERON:0009722!7.88e-09!23;UBERON:0005562!7.88e-09!23;UBERON:0007690!7.88e-09!23;UBERON:0003081!1.76e-08!88;UBERON:0006562!2.11e-08!24;UBERON:0001557!2.11e-08!24;UBERON:0001042!2.11e-08!24;UBERON:0008814!2.11e-08!24;UBERON:0009145!2.11e-08!24;UBERON:0001041!7.99e-08!92;UBERON:0000077!8.75e-08!97;UBERON:0002371!1.17e-07!16;UBERON:0001007!3.06e-07!128;UBERON:0001555!3.06e-07!128;UBERON:0007026!3.06e-07!128;UBERON:0004119!4.45e-07!130;UBERON:0000925!4.45e-07!130;UBERON:0006595!4.45e-07!130;UBERON:0000926!6.48e-07!193;UBERON:0004120!6.48e-07!193;UBERON:0006603!6.48e-07!193;UBERON:0001474!6.86e-07!22;UBERON:0004765!6.86e-07!22;UBERON:0001434!6.86e-07!22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,6.30e-23,48;UBERON:0002405,6.30e-23,48;UBERON:0002390,2.37e-21,45;UBERON:0003061,2.37e-21,45;UBERON:0004177,1.38e-13,29;UBERON:0005057,1.38e-13,29;UBERON:0000077,1.95e-11,35;UBERON:0003408,4.35e-11,24;UBERON:0002370,1.02e-10,23;UBERON:0000974,1.02e-10,23;UBERON:0004807,1.02e-10,23;UBERON:0005058,1.02e-10,23;UBERON:0003351,1.02e-10,23;UBERON:0009113,1.02e-10,23;UBERON:0003295,1.02e-10,23;UBERON:0009722,1.02e-10,23;UBERON:0005562,1.02e-10,23;UBERON:0007690,1.02e-10,23;UBERON:0006562,7.78e-10,24;UBERON:0001557,7.78e-10,24;UBERON:0001042,7.78e-10,24;UBERON:0008814,7.78e-10,24;UBERON:0009145,7.78e-10,24;UBERON:0003081,3.84e-09,87;UBERON:0001041,5.83e-09,80;UBERON:0001007,1.01e-08,116;UBERON:0001555,1.01e-08,116;UBERON:0007026,1.01e-08,116;UBERON:0004119,1.18e-08,118;UBERON:0000925,1.18e-08,118;UBERON:0006595,1.18e-08,118;UBERON:0002371,1.91e-08,16;UBERON:0001004,3.71e-08,42;UBERON:0001474,3.89e-08,22;UBERON:0004765,3.89e-08,22;UBERON:0001434,3.89e-08,22;UBERON:0004921,4.17e-08,114;UBERON:0000065,8.07e-08,41;UBERON:0002384,1.09e-07,46;UBERON:0000072,1.22e-07,27 | |||
|phase1_expression=0,0,0,0,0,0,0,170.055416972556,41.9550392011967,49.3876150539406,51.536608435877,53.6068908448661,174.967145989692,205.263104879806,23.6507930889121,28.5490127019655,6.99561878128147,138.645621674945,166.182693530155,134.531519619976,5.01755411891312,54.0142774532816,61.1207506585109,12.6394014006791,13.3057383018959,0,0,0,1.71021077510736,4.03248207615889,1.33038306393183,0.635030673459631,0,0,0,0,0,152.345513588234,92.1975706538085,125.122174809738,185.292918729769,191.935781273323,164.588009677561,0,0,0,0.782391344348039,0,0,0,0,0,115.937780785896,124.03692628394,123.682518084427,0.257259436035947,0.573066879877513,0,0,0,0,0,0,13.9484456178617,15.8218618010716,14.9200824138681,4.49400165777607,3.84218305321555,0.207379224616955,0,0,0.285650984403804,0.883474163806454,0,0.191690942036473,0,0,0.638436690425939,0.614426133024974,0.131886287730194,0.274462930807229,1.04182674111352,0.837548997004143,0.56276261003168,1.37518422999129,0.883885756421003,0.711858403995515,0,1.4387976733305,0,0,0.860423876981386,0,0.539703191637817,1.29955283489534,0,10.1119982494861,0,0,0,0,0,0,0,0,0,0,8.5637909789295,70.1721664683835,4.75014845007439,0.520455980298408,0.608930956624282,0.461230994512117,0.904335843315735,1.05829836422134,0.502666365318702,0.741584903203122,4.62717942143717,24.7690954545965,3.558870698843,13.6921741445444,14.0613823409214,5.59175283654366,0,0,10.7291963187608,32.5897138656103,23.9961092397363,30.1156438163163,1.19832511523858,1.37250180845588,0,1.39059456153821,1.02286182932132,1.0389402227978,0.811206315338788,0.81471491080253,17.5413828560231,1.0108910337347,0.420883711772948,0.390361328888111,0.229902104433473,0.180062129805349,0.452114453507145,0.476255494059295,0.384341160854549,0.281105173679186,1.29351685369508,0,0.378212160335639,0.527853372491847,0.219195732427575,0.556094498451196,1.0447564995665,1.64625709126355,0.199034266818493,22.4708219940235,20.5878325691772,17.9023004619223,0,0.469052119962192,0.36012412292203,0.23674473558521,0.787056926989615,0.154267112887378,0.232533944750408,0,0.583826711835847,0.329119699826961,0.820837320395476,1.62137619091711,2.33919979880532,3.51280184465681,2.41571553768669,0.630869845692382,0.308713837137853,11.2342386214491,2.90895623329899,0.426576501070468,0.232236671860439,0.515469845288373,1.4117846723634,0.667134131534611,1.14135375667535,3.79623249235609,1.64698954724011,4.02136334080431,4.57599885694647,3.50935356814416,4.49409704327111,3.8904848977445,3.98282546508734,0.189667900953082,0.342745537829186,0,0.203651327845314,0,0.210407459670956,0.569128834118316,0.590440591918409,0.784993639206874,0.740382983530803,2.37162101669719,2.8363667971736,1.76903095601883,1.12431056192427,3.65148218499305,2.65294875727659,4.58326533206556,6.04161888646702,6.16113861745134,3.56929837144506,11.5014565221884,5.95425516269605,5.61667811606209,2.52578877947112,1.4351793081753,1.92977408545347,20.5076041084931,0.189491411770485,0.162964976442026,0.509235257325564,0.469380496577004,3.68513766371995,1.19021820443007,2.34160377429359,3.94087860265477,3.76489972402917,5.89982644032702,11.6342953448174,15.1962784041988,10.2700831592873,18.0949540727127,4.89515115436839,6.39293554924747,3.86311444826625,0.80275294993896,0.820481806145422,0,2.27223834483936,0,0,0,0,0,0,0,0,0,1.28528526568723,1.84522110770749,1.6025904330053,0.488660878060728,3.46437258242324,3.98235415019888,0.728341908464944,0.302323556964751,0.188605079755898,0.885905678642318,2.15204603560749,1.29214146584111,0.727067458955011,1.78248689192361,4.10847785316561,3.16255825724996,1.03135543248187,0,0.18006109403131,0,0.857348140126369,0.532020700926821,0.178368817602071,0.329098041204242,0.608929898229199,3.98941903708308,0,0.882113592219848,6.76033637060068,0.807322133479528,1.08563264870681,1.07435109602823,2.46211349617592,7.57850175237612,1.48340241608408,50.2360389545687,6.60437977482312,13.8895895527284,19.0252141574738,37.864301078724,50.788754451848,51.8434211481259,52.6217460736954,51.2721902814412,0,0.316335993581135,0.813277868507395,0.540026704109006,1.04544148007234,0.87345025498471,0.539457385539283,1.48776220305605,2.6175594198403,2.20345454596048,11.1841076355647,0.56369293868419,0.299033092087958,0.496375471371293,0.194451188344048,0.129159823477731,0.506868376472335,0.58678619322877,0.39061315453185,0.314578033277133,0.483168241652012,2.88030006257865,102.071591962902,18.8534450219853,25.4723173768772,48.0707045017842,61.4061566139461,70.9292436569116,83.8964237649382,88.4660267775718,99.3509867489773,100.13574394467,102.338577913893,109.542657951482,128.63523227312,135.109698921894,0.680191150845634,0,0,0,2.31827512838629,7.69498149349846,2.74727436400898,2.57242054894879,2.00628841614145,0,0.460325236507177,1.14579102687879,0.859265911718438,0,0.755393897389701,0.675022500231806,0.45032120322422,0,0,0,0,0.853668028770671,1.94485373654635,0.209613162627982,1.47074806760011,0.666740183404846,1.23621034343337,2.56735367673452,0.505394423527595,1.52087579934144,1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| |||
|short_description=p1@Arhgap30 | |||
}} |
Revision as of 06:12, 5 August 2015
Short description: | p1@Arhgap30 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Arhgap30_5end |
Coexpression cluster: | MCL_coexpression_mm9:36 |
Association with transcript: | 0bp_to_ENSMUST00000111282, NM_001005508, uc007doh.2, uc007doi.2_5end |
EntrezGene: | 226652 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.01e-12 | 32 |
hematopoietic oligopotent progenitor cell | 1.01e-12 | 32 |
hematopoietic stem cell | 1.01e-12 | 32 |
hematopoietic multipotent progenitor cell | 1.01e-12 | 32 |
hematopoietic lineage restricted progenitor cell | 1.29e-10 | 25 |
lymphoid lineage restricted progenitor cell | 2.95e-09 | 12 |
leukocyte | 4.84e-09 | 17 |
nongranular leukocyte | 4.84e-09 | 17 |
T cell | 1.43e-08 | 11 |
pro-T cell | 1.43e-08 | 11 |
lymphocyte | 4.72e-08 | 13 |
common lymphoid progenitor | 4.72e-08 | 13 |
connective tissue cell | 1.09e-07 | 46 |
mesenchymal cell | 1.09e-07 | 46 |
mature alpha-beta T cell | 2.18e-07 | 9 |
alpha-beta T cell | 2.18e-07 | 9 |
immature T cell | 2.18e-07 | 9 |
mature T cell | 2.18e-07 | 9 |
immature alpha-beta T cell | 2.18e-07 | 9 |