FFCP PHASE1:Mm9::chr1:169280315..169280365,+: Difference between revisions
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{{FFCP|EntrezGene=56752|HGNC=|MCL_coexpression_id=369|UniProt=Q3U367,Q3TMT4,Q3V1N7,Q9JLJ2|association_with_transcript=193bp_to_ENSMUST00000028004,NM_019993,uc007dkx.1_5end|description=CAGE_peak_1_at_Aldh9a1_5end|id=chr1:169280315..169280365,+|ontology_enrichment_celltype=CL:0000063!1.93e-10!66;CL:0000066!5.58e-07!25|ontology_enrichment_celltype_v019_2=CL:0000066,5.58e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!2.99e-22!130;UBERON:0000925!2.99e-22!130;UBERON:0006595!2.99e-22!130;UBERON:0001007!1.50e-21!128;UBERON:0001555!1.50e-21!128;UBERON:0007026!1.50e-21!128;UBERON:0004921!2.05e-20!126;UBERON:0004185!2.05e-20!126;UBERON:0000160!1.87e-17!43;UBERON:0005409!2.90e-17!59;UBERON:0003929!1.18e-15!55;UBERON:0002405!2.94e-14!70;UBERON:0000490!2.07e-13!66;UBERON:0005057!4.82e-12!51;UBERON:0000949!1.55e-11!72;UBERON:0002365!1.74e-11!25;UBERON:0002330!1.74e-11!25;UBERON:0009854!5.54e-11!23;UBERON:0009856!5.54e-11!23;UBERON:0002107!1.12e-10!22;UBERON:0007499!1.12e-10!22;UBERON:0006925!1.12e-10!22;UBERON:0009497!1.12e-10!22;UBERON:0000015!1.12e-10!22;UBERON:0002423!1.12e-10!22;UBERON:0006235!1.12e-10!22;UBERON:0008835!1.12e-10!22;UBERON:0003894!1.12e-10!22;UBERON:0004161!1.12e-10!22;UBERON:0008836!1.12e-10!22;UBERON:0004923!2.71e-10!24;UBERON:0000344!1.46e-09!15;UBERON:0002530!3.97e-09!65;UBERON:0005911!5.11e-09!69;UBERON:0002368!7.24e-09!60;UBERON:0005172!1.45e-08!49;UBERON:0005173!1.45e-08!49;UBERON:0002417!1.45e-08!49;UBERON:0000916!1.45e-08!49;UBERON:0001242!1.55e-08!13;UBERON:0000060!1.55e-08!13;UBERON:0001262!1.55e-08!13;UBERON:0004786!1.55e-08!13;UBERON:0001041!3.62e-08!92;UBERON:0000077!6.29e-08!97;UBERON:0003104!3.77e-07!131;UBERON:0009142!3.77e-07!131|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.36e-18,118;UBERON:0000925,1.36e-18,118;UBERON:0006595,1.36e-18,118;UBERON:0001007,5.87e-18,116;UBERON:0001555,5.87e-18,116;UBERON:0007026,5.87e-18,116;UBERON:0004921,6.49e-17,114;UBERON:0003929,1.18e-15,55;UBERON:0000160,3.53e-15,31;UBERON:0005409,1.77e-14,47;UBERON:0000490,2.07e-13,66;UBERON:0000949,1.55e-11,72;UBERON:0002365,1.74e-11,25;UBERON:0002330,1.74e-11,25;UBERON:0009854,5.54e-11,23;UBERON:0009856,5.54e-11,23;UBERON:0002107,1.12e-10,22;UBERON:0007499,1.12e-10,22;UBERON:0006925,1.12e-10,22;UBERON:0009497,1.12e-10,22;UBERON:0000015,1.12e-10,22;UBERON:0002423,1.12e-10,22;UBERON:0006235,1.12e-10,22;UBERON:0008835,1.12e-10,22;UBERON:0003894,1.12e-10,22;UBERON:0004161,1.12e-10,22;UBERON:0008836,1.12e-10,22;UBERON:0004923,2.71e-10,24;UBERON:0000344,1.46e-09,15;UBERON:0002530,3.97e-09,65;UBERON:0005911,5.11e-09,69;UBERON:0002368,7.24e-09,60;UBERON:0005172,1.45e-08,49;UBERON:0005173,1.45e-08,49;UBERON:0002417,1.45e-08,49;UBERON:0000916,1.45e-08,49;UBERON:0001242,1.55e-08,13;UBERON:0001262,1.55e-08,13;UBERON:0004786,1.55e-08,13|phase1_expression=25.9441132309766,319.312497990015,285.284523097239,363.56198199081,438.283763703054,104.588786401107,108.629877876919,35.3797906229919,21.6814632113567,25.7470978954193,28.0797467889828,34.142484050004,31.8433357672043,30.1600388345541,42.9711592742205,38.4703008040669,41.2741508095607,27.6029394688458,23.7207970137928,28.434106670468,37.5891342467728,49.0497298932373,60.8595508693719,135.513582106015,129.386834521884,273.33441491875,207.627282148674,190.907512159698,341.282061343648,254.55043105753,121.508319839107,45.7222084890934,33.8285633171514,63.3926724061755,70.1909435995597,73.8081825391706,73.2967988981905,22.1821764290561,28.9094077473806,18.8468547830567,9.41170380849623,10.2456822743767,13.5942898848723,28.2008872265293,29.5006869848787,35.7916166715279,17.9950009200049,6.5407546914134,11.8630538676615,10.6936444490856,24.0776645195624,11.5002051491977,28.1874778176997,40.6202799526353,36.6342241065286,15.6928255981928,20.3438742356517,15.9858348606007,5.26022798234954,2.64495489636016,5.07065122804943,18.9752937958714,24.9002542911119,36.4459385498967,43.5101199529469,36.2344858622511,16.1784059679939,14.6002956022191,4.04389488003063,4.05017814995072,4.6271491497304,16.8534080798244,15.0190607847097,3.06226998037385,4.31304619582064,5.51531271966013,9.91042928994498,7.78892762319645,7.21950706304344,5.01167893374737,5.39777097254217,1.56274011167028,9.49222196604695,9.00420176050688,12.3766580699216,10.606629077052,11.2473627831291,6.52398060388552,5.6794644999888,12.0158780569789,20.0006497204158,193.595372320812,159.793263421321,257.438422411239,224.172864019446,289.873395951976,101.260426914993,32.8930522575651,25.4590284510811,25.4404493647445,19.2955485094052,39.7812079984385,43.3168907501298,28.4426681261332,16.2368280758411,15.7083116594561,10.6160133453104,123.775325615461,25.3759125974228,24.6413950847609,33.4826680658642,35.9269264408327,39.435250030786,23.8141772073144,25.1639833270408,33.4273132936937,65.5066664496091,28.1968745993828,45.9997487013935,17.794353494215,22.0841518460394,20.3647606316793,54.0536107532554,8.49064311333487,7.12118803165747,215.350297540843,50.322352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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:56752 | |||
|HGNC= | |||
|MCL_coexpression_id=369 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q3U367,uniprot:Q3TMT4,uniprot:Q3V1N7,uniprot:Q9JLJ2 | |||
|association_with_transcript=193bp_to_ENSMUST00000028004,NM_019993,uc007dkx.1_5end | |||
|cluster_id=chr1:169280315..169280365,+ | |||
|description=CAGE_peak_1_at_Aldh9a1_5end | |||
|id=chr1:169280315..169280365,+ | |||
|ontology_enrichment_celltype=CL:0000063!1.93e-10!66;CL:0000066!5.58e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,5.58e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!2.99e-22!130;UBERON:0000925!2.99e-22!130;UBERON:0006595!2.99e-22!130;UBERON:0001007!1.50e-21!128;UBERON:0001555!1.50e-21!128;UBERON:0007026!1.50e-21!128;UBERON:0004921!2.05e-20!126;UBERON:0004185!2.05e-20!126;UBERON:0000160!1.87e-17!43;UBERON:0005409!2.90e-17!59;UBERON:0003929!1.18e-15!55;UBERON:0002405!2.94e-14!70;UBERON:0000490!2.07e-13!66;UBERON:0005057!4.82e-12!51;UBERON:0000949!1.55e-11!72;UBERON:0002365!1.74e-11!25;UBERON:0002330!1.74e-11!25;UBERON:0009854!5.54e-11!23;UBERON:0009856!5.54e-11!23;UBERON:0002107!1.12e-10!22;UBERON:0007499!1.12e-10!22;UBERON:0006925!1.12e-10!22;UBERON:0009497!1.12e-10!22;UBERON:0000015!1.12e-10!22;UBERON:0002423!1.12e-10!22;UBERON:0006235!1.12e-10!22;UBERON:0008835!1.12e-10!22;UBERON:0003894!1.12e-10!22;UBERON:0004161!1.12e-10!22;UBERON:0008836!1.12e-10!22;UBERON:0004923!2.71e-10!24;UBERON:0000344!1.46e-09!15;UBERON:0002530!3.97e-09!65;UBERON:0005911!5.11e-09!69;UBERON:0002368!7.24e-09!60;UBERON:0005172!1.45e-08!49;UBERON:0005173!1.45e-08!49;UBERON:0002417!1.45e-08!49;UBERON:0000916!1.45e-08!49;UBERON:0001242!1.55e-08!13;UBERON:0000060!1.55e-08!13;UBERON:0001262!1.55e-08!13;UBERON:0004786!1.55e-08!13;UBERON:0001041!3.62e-08!92;UBERON:0000077!6.29e-08!97;UBERON:0003104!3.77e-07!131;UBERON:0009142!3.77e-07!131 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.36e-18,118;UBERON:0000925,1.36e-18,118;UBERON:0006595,1.36e-18,118;UBERON:0001007,5.87e-18,116;UBERON:0001555,5.87e-18,116;UBERON:0007026,5.87e-18,116;UBERON:0004921,6.49e-17,114;UBERON:0003929,1.18e-15,55;UBERON:0000160,3.53e-15,31;UBERON:0005409,1.77e-14,47;UBERON:0000490,2.07e-13,66;UBERON:0000949,1.55e-11,72;UBERON:0002365,1.74e-11,25;UBERON:0002330,1.74e-11,25;UBERON:0009854,5.54e-11,23;UBERON:0009856,5.54e-11,23;UBERON:0002107,1.12e-10,22;UBERON:0007499,1.12e-10,22;UBERON:0006925,1.12e-10,22;UBERON:0009497,1.12e-10,22;UBERON:0000015,1.12e-10,22;UBERON:0002423,1.12e-10,22;UBERON:0006235,1.12e-10,22;UBERON:0008835,1.12e-10,22;UBERON:0003894,1.12e-10,22;UBERON:0004161,1.12e-10,22;UBERON:0008836,1.12e-10,22;UBERON:0004923,2.71e-10,24;UBERON:0000344,1.46e-09,15;UBERON:0002530,3.97e-09,65;UBERON:0005911,5.11e-09,69;UBERON:0002368,7.24e-09,60;UBERON:0005172,1.45e-08,49;UBERON:0005173,1.45e-08,49;UBERON:0002417,1.45e-08,49;UBERON:0000916,1.45e-08,49;UBERON:0001242,1.55e-08,13;UBERON:0001262,1.55e-08,13;UBERON:0004786,1.55e-08,13 | |||
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| |||
|short_description=p1@Aldh9a1 | |||
}} |
Revision as of 04:50, 5 August 2015
Short description: | p1@Aldh9a1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Aldh9a1_5end |
Coexpression cluster: | MCL_coexpression_mm9:369 |
Association with transcript: | 193bp_to_ENSMUST00000028004, NM_019993, uc007dkx.1_5end |
EntrezGene: | 56752 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.58e-07 | 25 |