FFCP PHASE1:Mm9::chr9:21822144..21822178,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=158|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr9:21822144..21822178,-|id=chr9:21822144..21822178,-|ontology_enrichment_celltype=CL:0000540!5.78e-21!33;CL:0000047!5.78e-21!33;CL:0000031!5.78e-21!33;CL:0000404!5.78e-21!33;CL:0000117!2.66e-20!23;CL:0000337!2.66e-20!23;CL:0000393!1.01e-16!39;CL:0000211!1.01e-16!39;CL:0002319!4.91e-15!43;CL:0000221!2.10e-14!44;CL:0000133!2.10e-14!44;CL:0000055!6.57e-12!50|ontology_enrichment_celltype_v019_2=CL:0000117,4.22e-34,23;CL:0000337,4.22e-34,23;CL:0000540,1.93e-25,33;CL:0000047,1.93e-25,33;CL:0000031,1.93e-25,33;CL:0000404,1.93e-25,33;CL:0000393,2.26e-20,39;CL:0000211,2.26e-20,39;CL:0002319,8.62e-18,43;CL:0000221,3.21e-17,44;CL:0000133,3.21e-17,44;CL:0002609,2.61e-10,6;CL:0002321,2.98e-08,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.41e-31!73;UBERON:0005743!1.41e-31!73;UBERON:0000073!4.44e-31!75;UBERON:0001016!4.44e-31!75;UBERON:0002346!3.95e-28!71;UBERON:0003075!3.95e-28!71;UBERON:0007284!3.95e-28!71;UBERON:0004121!5.98e-28!102;UBERON:0000924!5.98e-28!102;UBERON:0006601!5.98e-28!102;UBERON:0002020!2.53e-25!34;UBERON:0001049!6.06e-25!52;UBERON:0005068!6.06e-25!52;UBERON:0006241!6.06e-25!52;UBERON:0007135!6.06e-25!52;UBERON:0000955!2.96e-23!50;UBERON:0006238!2.96e-23!50;UBERON:0000033!9.27e-23!63;UBERON:0002616!1.60e-22!49;UBERON:0003056!3.33e-21!49;UBERON:0002791!4.81e-21!29;UBERON:0003528!4.81e-21!29;UBERON:0001893!4.81e-21!29;UBERON:0003080!5.09e-19!40;UBERON:0002780!2.54e-18!39;UBERON:0001890!2.54e-18!39;UBERON:0006240!2.54e-18!39;UBERON:0000956!9.05e-15!21;UBERON:0001869!9.05e-15!21;UBERON:0000203!9.05e-15!21;UBERON:0007811!2.48e-12!86;UBERON:0002619!1.35e-11!17;UBERON:0000153!2.46e-10!94;UBERON:0002021!4.82e-10!10;UBERON:0000411!4.82e-10!10;UBERON:0001950!4.82e-10!10;UBERON:0002420!1.87e-07!8;UBERON:0007245!1.87e-07!8;UBERON:0010009!1.87e-07!8;UBERON:0010011!1.87e-07!8;UBERON:0000454!1.87e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.28e-44,54;UBERON:0002020,6.90e-44,34;UBERON:0001017,2.69e-43,73;UBERON:0001016,8.43e-42,75;UBERON:0001049,3.33e-41,52;UBERON:0005068,3.33e-41,52;UBERON:0006241,3.33e-41,52;UBERON:0007135,3.33e-41,52;UBERON:0002346,1.06e-38,64;UBERON:0003075,1.06e-38,64;UBERON:0007284,1.06e-38,64;UBERON:0003528,2.13e-36,29;UBERON:0002791,2.13e-36,29;UBERON:0001893,2.13e-36,29;UBERON:0004121,6.09e-35,95;UBERON:0000924,6.09e-35,95;UBERON:0006601,6.09e-35,95;UBERON:0000955,6.95e-34,47;UBERON:0006238,6.95e-34,47;UBERON:0002616,1.19e-32,46;UBERON:0010371,1.87e-32,73;UBERON:0003080,4.11e-30,40;UBERON:0002780,6.51e-29,39;UBERON:0001890,6.51e-29,39;UBERON:0006240,6.51e-29,39;UBERON:0003056,3.23e-28,49;UBERON:0000956,1.97e-25,21;UBERON:0001869,1.97e-25,21;UBERON:0000203,1.97e-25,21;UBERON:0010314,2.71e-23,92;UBERON:0002619,6.94e-20,17;UBERON:0002021,2.92e-16,10;UBERON:0000411,2.92e-16,10;UBERON:0001950,2.92e-16,10;UBERON:0000025,8.76e-13,114;UBERON:0002420,8.79e-12,8;UBERON:0007245,8.79e-12,8;UBERON:0010009,8.79e-12,8;UBERON:0010011,8.79e-12,8;UBERON:0000454,8.79e-12,8;UBERON:0004111,2.99e-11,122;UBERON:0003076,6.19e-11,12;UBERON:0003057,6.19e-11,12;UBERON:0002240,1.32e-09,6;UBERON:0005174,1.32e-09,6;UBERON:0001137,1.32e-09,6;UBERON:0000369,2.11e-08,5;UBERON:0002435,2.11e-08,5;UBERON:0000204,2.11e-08,5;UBERON:0010082,2.11e-08,5;UBERON:0011216,2.19e-08,194;UBERON:0001948,2.44e-08,5;UBERON:0002315,2.44e-08,5;UBERON:0000483,6.04e-07,174;UBERON:0000119,9.59e-07,176|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,7.68802551266472,13.7537654610729,4.43681982454325,0,0,0,0,0,0,0.768436610643109,8.39885859698669,10.9354810048669,5.8890989178387,3.71346279724945,3.97563373712904,4.77714116938321,9.68039257284187,8.27296907949019,3.30347642998166,8.93811366596314,8.75557239560588,8.17694983927202,10.0636407962651,7.29278718779464,3.07101298901519,2.25105044012672,5.04234217663473,16.4992007865254,7.68807076315156,3.91438836233131,0.227178579999552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.346970653532272,0.913396434936424,0.230615497256059,0.301445281105245,0.470354828542819,0,0,0,0,0,0,0,0,3.22058876712702,1.8850203613211,0,0,0,0,3.14560342750128,2.74500361691176,6.91098936620754,2.08589184230732,3.3243009452943,1.87009240103604,2.59586020908412,0.101839363850316,0,0,0,0.910843100738926,0,0.540186389416048,2.41127708537144,1.90502197623718,2.562274405697,0.937017245597288,0.517406741478031,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,1.26173969138476,10.2904612379284,0,0,0.639864751605702,0.928946687441754,0,0,0.444756087689741,0,0,0.329397909448022,0,0.397912944082302,0,0,0,0,0,0.114248512609729,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,2.40825884981688,1.28932855251423,0,0,0.94652465824877,0,1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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=158 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr9:21822144..21822178,- | |||
|description=CAGE_peak_at_chr9:21822144..21822178,- | |||
|id=chr9:21822144..21822178,- | |||
|ontology_enrichment_celltype=CL:0000540!5.78e-21!33;CL:0000047!5.78e-21!33;CL:0000031!5.78e-21!33;CL:0000404!5.78e-21!33;CL:0000117!2.66e-20!23;CL:0000337!2.66e-20!23;CL:0000393!1.01e-16!39;CL:0000211!1.01e-16!39;CL:0002319!4.91e-15!43;CL:0000221!2.10e-14!44;CL:0000133!2.10e-14!44;CL:0000055!6.57e-12!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.22e-34,23;CL:0000337,4.22e-34,23;CL:0000540,1.93e-25,33;CL:0000047,1.93e-25,33;CL:0000031,1.93e-25,33;CL:0000404,1.93e-25,33;CL:0000393,2.26e-20,39;CL:0000211,2.26e-20,39;CL:0002319,8.62e-18,43;CL:0000221,3.21e-17,44;CL:0000133,3.21e-17,44;CL:0002609,2.61e-10,6;CL:0002321,2.98e-08,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.41e-31!73;UBERON:0005743!1.41e-31!73;UBERON:0000073!4.44e-31!75;UBERON:0001016!4.44e-31!75;UBERON:0002346!3.95e-28!71;UBERON:0003075!3.95e-28!71;UBERON:0007284!3.95e-28!71;UBERON:0004121!5.98e-28!102;UBERON:0000924!5.98e-28!102;UBERON:0006601!5.98e-28!102;UBERON:0002020!2.53e-25!34;UBERON:0001049!6.06e-25!52;UBERON:0005068!6.06e-25!52;UBERON:0006241!6.06e-25!52;UBERON:0007135!6.06e-25!52;UBERON:0000955!2.96e-23!50;UBERON:0006238!2.96e-23!50;UBERON:0000033!9.27e-23!63;UBERON:0002616!1.60e-22!49;UBERON:0003056!3.33e-21!49;UBERON:0002791!4.81e-21!29;UBERON:0003528!4.81e-21!29;UBERON:0001893!4.81e-21!29;UBERON:0003080!5.09e-19!40;UBERON:0002780!2.54e-18!39;UBERON:0001890!2.54e-18!39;UBERON:0006240!2.54e-18!39;UBERON:0000956!9.05e-15!21;UBERON:0001869!9.05e-15!21;UBERON:0000203!9.05e-15!21;UBERON:0007811!2.48e-12!86;UBERON:0002619!1.35e-11!17;UBERON:0000153!2.46e-10!94;UBERON:0002021!4.82e-10!10;UBERON:0000411!4.82e-10!10;UBERON:0001950!4.82e-10!10;UBERON:0002420!1.87e-07!8;UBERON:0007245!1.87e-07!8;UBERON:0010009!1.87e-07!8;UBERON:0010011!1.87e-07!8;UBERON:0000454!1.87e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.28e-44,54;UBERON:0002020,6.90e-44,34;UBERON:0001017,2.69e-43,73;UBERON:0001016,8.43e-42,75;UBERON:0001049,3.33e-41,52;UBERON:0005068,3.33e-41,52;UBERON:0006241,3.33e-41,52;UBERON:0007135,3.33e-41,52;UBERON:0002346,1.06e-38,64;UBERON:0003075,1.06e-38,64;UBERON:0007284,1.06e-38,64;UBERON:0003528,2.13e-36,29;UBERON:0002791,2.13e-36,29;UBERON:0001893,2.13e-36,29;UBERON:0004121,6.09e-35,95;UBERON:0000924,6.09e-35,95;UBERON:0006601,6.09e-35,95;UBERON:0000955,6.95e-34,47;UBERON:0006238,6.95e-34,47;UBERON:0002616,1.19e-32,46;UBERON:0010371,1.87e-32,73;UBERON:0003080,4.11e-30,40;UBERON:0002780,6.51e-29,39;UBERON:0001890,6.51e-29,39;UBERON:0006240,6.51e-29,39;UBERON:0003056,3.23e-28,49;UBERON:0000956,1.97e-25,21;UBERON:0001869,1.97e-25,21;UBERON:0000203,1.97e-25,21;UBERON:0010314,2.71e-23,92;UBERON:0002619,6.94e-20,17;UBERON:0002021,2.92e-16,10;UBERON:0000411,2.92e-16,10;UBERON:0001950,2.92e-16,10;UBERON:0000025,8.76e-13,114;UBERON:0002420,8.79e-12,8;UBERON:0007245,8.79e-12,8;UBERON:0010009,8.79e-12,8;UBERON:0010011,8.79e-12,8;UBERON:0000454,8.79e-12,8;UBERON:0004111,2.99e-11,122;UBERON:0003076,6.19e-11,12;UBERON:0003057,6.19e-11,12;UBERON:0002240,1.32e-09,6;UBERON:0005174,1.32e-09,6;UBERON:0001137,1.32e-09,6;UBERON:0000369,2.11e-08,5;UBERON:0002435,2.11e-08,5;UBERON:0000204,2.11e-08,5;UBERON:0010082,2.11e-08,5;UBERON:0011216,2.19e-08,194;UBERON:0001948,2.44e-08,5;UBERON:0002315,2.44e-08,5;UBERON:0000483,6.04e-07,174;UBERON:0000119,9.59e-07,176 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,7.68802551266472,13.7537654610729,4.43681982454325,0,0,0,0,0,0,0.768436610643109,8.39885859698669,10.9354810048669,5.8890989178387,3.71346279724945,3.97563373712904,4.77714116938321,9.68039257284187,8.27296907949019,3.30347642998166,8.93811366596314,8.75557239560588,8.17694983927202,10.0636407962651,7.29278718779464,3.07101298901519,2.25105044012672,5.04234217663473,16.4992007865254,7.68807076315156,3.91438836233131,0.227178579999552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.346970653532272,0.913396434936424,0.230615497256059,0.301445281105245,0.470354828542819,0,0,0,0,0,0,0,0,3.22058876712702,1.8850203613211,0,0,0,0,3.14560342750128,2.74500361691176,6.91098936620754,2.08589184230732,3.3243009452943,1.87009240103604,2.59586020908412,0.101839363850316,0,0,0,0.910843100738926,0,0.540186389416048,2.41127708537144,1.90502197623718,2.562274405697,0.937017245597288,0.517406741478031,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,1.26173969138476,10.2904612379284,0,0,0.639864751605702,0.928946687441754,0,0,0.444756087689741,0,0,0.329397909448022,0,0.397912944082302,0,0,0,0,0,0.114248512609729,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,2.40825884981688,1.28932855251423,0,0,0.94652465824877,0,1.29254038639679,0.477937595905104,0.445597348164788,0.283076530788832,0.809621403349789,0.584511715822624,1.58115111178609,3.21321316421807,0,0,0,0,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0.340439605753788,0,0,0.428674070063185,0,0,0.493647061806363,0,0,0,0,0,0,0,0,0,0,4.63563255026274,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0.108005340821801,0.418176592028937,0.436725127492355,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0.483168241652012,0,0,0,0,0,0,0,0,0,0,0.15241361331,0,0,0,0,0,0,0,0,0,0,0,0,0,12.9892923801925,7.82552902062201,13.1765968091061,7.21783365843488,3.42541259885321,7.55393897389701,8.77529250301348,4.95353323546643,14.5005570874945,8.80192529978094,2.38710899443606,2.39414924040619,0.341467211508268,0.486213434136588,0.838452650511929,0,1.11123363900808,0,0.962757628775446,0,0,0.565879024158229,0.468207537349412,0.640251524048693,0.459483751644906,0.952587382566147,0.231768651889711,0.77163688185482,0.412085900803307,0.441596760403192,0.685738504770831,0.887379030796687,0.476872379894642,1.16277133305863,0.282328141245992,0.676916863133412,0.548783918618318,1.05227884575137,1.08643291076689,1.12228454331548,0.711810108745045,0.29551344712669,2.45538625901814,0.929621047115796,0.192906610981141,0.749431733813838,0.467863216890817,0.214871054048298,0,0,0 | |||
|short_description=p@chr9:21822144..21822178,- | |||
}} |
Latest revision as of 22:17, 4 August 2015
Short description: | p@chr9:21822144..21822178, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:21822144..21822178, - |
Coexpression cluster: | MCL_coexpression_mm9:158 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.22e-34 | 23 |
neuroblast (sensu Vertebrata) | 4.22e-34 | 23 |
neuron | 1.93e-25 | 33 |
neuronal stem cell | 1.93e-25 | 33 |
neuroblast | 1.93e-25 | 33 |
electrically signaling cell | 1.93e-25 | 33 |
electrically responsive cell | 2.26e-20 | 39 |
electrically active cell | 2.26e-20 | 39 |
neural cell | 8.62e-18 | 43 |
ectodermal cell | 3.21e-17 | 44 |
neurectodermal cell | 3.21e-17 | 44 |
neuron of cerebral cortex | 2.61e-10 | 6 |
embryonic cell | 2.98e-08 | 70 |