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FFCP PHASE1:Mm9::chr4:133157807..133157819,-: Difference between revisions

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{{FFCP|EntrezGene=55948|HGNC=|MCL_coexpression_id=1018|UniProt=O70456|association_with_transcript=263bp_to_ENSMUST00000057311,NM_018754,uc008vdc.1_5end|description=CAGE_peak_4_at_Sfn_5end|id=chr4:133157807..133157819,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002076,2.06e-09,15;CL:0002563,4.28e-09,9;CL:0002251,4.28e-09,9;CL:0000239,1.69e-08,6;CL:0000677,1.69e-08,6;CL:0000584,1.69e-08,6;CL:0000066,3.85e-08,25;CL:0000075,3.87e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!9.36e-13!59;UBERON:0000160!2.02e-11!43;UBERON:0004119!3.70e-11!130;UBERON:0000925!3.70e-11!130;UBERON:0006595!3.70e-11!130;UBERON:0001007!3.95e-10!128;UBERON:0001555!3.95e-10!128;UBERON:0007026!3.95e-10!128;UBERON:0000344!1.07e-09!15;UBERON:0004921!2.72e-09!126;UBERON:0004185!2.72e-09!126;UBERON:0001242!1.59e-08!13;UBERON:0000060!1.59e-08!13;UBERON:0001262!1.59e-08!13;UBERON:0004786!1.59e-08!13;UBERON:0004923!9.20e-08!24|ontology_enrichment_uberon_v019_2=UBERON:0005409,6.01e-18,47;UBERON:0000160,2.00e-15,31;UBERON:0000344,1.13e-13,15;UBERON:0004119,2.73e-12,118;UBERON:0000925,2.73e-12,118;UBERON:0006595,2.73e-12,118;UBERON:0004923,4.68e-12,24;UBERON:0001242,1.81e-11,13;UBERON:0001262,1.81e-11,13;UBERON:0004786,1.81e-11,13;UBERON:0001007,9.81e-11,116;UBERON:0001555,9.81e-11,116;UBERON:0007026,9.81e-11,116;UBERON:0003102,6.37e-10,22;UBERON:0004921,1.73e-09,114;UBERON:0003350,4.28e-09,9;UBERON:0004808,4.28e-09,9;UBERON:0001277,4.28e-09,9;UBERON:0000014,9.77e-08,5;UBERON:0001003,9.77e-08,5;UBERON:0002097,9.77e-08,5;UBERON:0002199,9.77e-08,5;UBERON:0007029,9.77e-08,5;UBERON:0007376,9.77e-08,5;UBERON:0002416,9.77e-08,5;UBERON:0007383,9.77e-08,5;UBERON:0000161,1.80e-07,5;UBERON:0000485,3.92e-07,11|phase1_expression=0.160148847104794,2.79180326111489,4.54999239389536,3.0246421130683,2.00358291978539,1.51091344720701,3.03696432774183,0,0.563154888606667,0,0,0,0,0,0,0.202475267389826,0,0.473193248037357,0.137114433605739,0.84877930359606,0.17008658030214,0.0992909512008853,0,2.87986361028132,2.06468352960453,2.29692785646008,3.01533397311352,3.44753972297422,1.52018735565099,0.756090389279792,3.54768817048488,0,0,0,1.73310971850765,2.1610503896604,0.816677425049476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17447824240415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.561777680527007,0,0,0,0.563373679106722,0,0,0,6.061749148314,2.28023878927589,1.51657333504435,0.68510327831436,0.517875767294343,0,0,0,0,0,0,0,2.71914464507811,0,0,0,0,0,1.86391761218122,0,0,1.02182822083437,0,0,0.127070227073065,0,0,0,0,0,0,0,0.203678727700633,0.497627882440372,3.0326731012041,0.210441855886474,0,0,0.360124259610698,0.60281927134286,0.136072998302656,0,0,0,0.215567992932842,0.189106080167819,0.703804496655795,1.09597866213787,2.78047249225598,2.089512999133,3.2925141825271,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.63460661282178,2.11560453330835,0,0.232236671860439,0.515469845288373,0.605050573870028,0,1.52180500890047,2.84717436926707,0.988193728344065,1.50801125280162,1.59165177632921,1.36474860983384,0.898819408654221,1.51296634912286,2.78797782556114,0.758671603812327,0.114248512609729,1.1270773567308,0.203651327845314,0.775809948670503,0.210407459670956,0.569128834118316,0.147610147979602,0.31399745568275,0.123397163921801,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0.488894929326078,0.509235257325564,0.234690248288502,0.167506257441816,0.714130922658041,0.780534591431195,0.472905432318573,0.221464689648775,0,0.491589944147214,0.172684981865896,0.433947175744535,0,0,0.983528546038072,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0.162886959353576,0,0,0,1.51161778482376,0.377210159511796,0.295301892880773,0.307435147943927,0.516856586336442,0,0.356497378384721,0.316036757935816,0,1.03135543248187,0.340439605753788,0.540183282093931,0.646793418913773,0,0,0.178368817602071,0.164549020602121,0,3.98941903708308,5.50763384245932,1.7642271844397,3.79238381765404,2.58343082713449,1.93001359770099,3.22305328808468,3.77524069413641,1.1659233465194,0,0,0.206386867963223,0,0,0.136694227721025,0,0,0.279902904647316,0.138199973804424,3.81868247206045,0,1.01659733563424,1.62008011232702,1.25452977608681,2.83871332870031,0.944050424693745,1.07449492442937,3.14107130380836,2.85152941241944,3.10669656543463,0,0.149516546043979,0.827292452285488,0.194451188344048,0.387479470433193,0.337912250981556,0,0.2604087696879,0.314578033277133,0,0.288030006257865,0,2.8381530140623,1.43795340030758,1.16928740680016,0.179026695667481,0.198681354781265,0.721172697119813,0.295379054349154,0.605798699688886,0.457240839929999,0,0.194915761479505,0.673482891482306,0.116876902181569,2.49403421976732,4.43971906748129,2.87084341150322,5.20442310728643,2.70465431645067,0,0.36630324853453,7.71726164684637,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0.415149390336707,0.399024873401031,0.341467211508268,1.21553358534147,1.04806581313991,0.551530525350042,0.222246727801615,0.412070114477788,0.64183841918363,0.252697211763798,0.50695859978048,0.377252682772152,0.468207537349412,0.0640251524048693,0.17230640686684,0.952587382566147,0.231768651889711,0.192909220463705,0,0.294397840268795,0,0.177475806159338,0,0.436039249896986,0.188218760830661,0.0846146078916765,0,0,0.135804113845862,0.561142271657738,0.593175090620871,0.29551344712669,0,0.619747364743864,0.771626443924566,0.749431733813838,0,0.214871054048298,0.382576664137687,0,0.231867835620421|short_description=p4@Sfn}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:55948
|HGNC=
|MCL_coexpression_id=1018
|TSSclassifier=NA
|UniProt=uniprot:O70456
|association_with_transcript=263bp_to_ENSMUST00000057311,NM_018754,uc008vdc.1_5end
|cluster_id=chr4:133157807..133157819,-
|description=CAGE_peak_4_at_Sfn_5end
|id=chr4:133157807..133157819,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0002076,2.06e-09,15;CL:0002563,4.28e-09,9;CL:0002251,4.28e-09,9;CL:0000239,1.69e-08,6;CL:0000677,1.69e-08,6;CL:0000584,1.69e-08,6;CL:0000066,3.85e-08,25;CL:0000075,3.87e-07,7
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0005409!9.36e-13!59;UBERON:0000160!2.02e-11!43;UBERON:0004119!3.70e-11!130;UBERON:0000925!3.70e-11!130;UBERON:0006595!3.70e-11!130;UBERON:0001007!3.95e-10!128;UBERON:0001555!3.95e-10!128;UBERON:0007026!3.95e-10!128;UBERON:0000344!1.07e-09!15;UBERON:0004921!2.72e-09!126;UBERON:0004185!2.72e-09!126;UBERON:0001242!1.59e-08!13;UBERON:0000060!1.59e-08!13;UBERON:0001262!1.59e-08!13;UBERON:0004786!1.59e-08!13;UBERON:0004923!9.20e-08!24
|ontology_enrichment_uberon_v019_2=UBERON:0005409,6.01e-18,47;UBERON:0000160,2.00e-15,31;UBERON:0000344,1.13e-13,15;UBERON:0004119,2.73e-12,118;UBERON:0000925,2.73e-12,118;UBERON:0006595,2.73e-12,118;UBERON:0004923,4.68e-12,24;UBERON:0001242,1.81e-11,13;UBERON:0001262,1.81e-11,13;UBERON:0004786,1.81e-11,13;UBERON:0001007,9.81e-11,116;UBERON:0001555,9.81e-11,116;UBERON:0007026,9.81e-11,116;UBERON:0003102,6.37e-10,22;UBERON:0004921,1.73e-09,114;UBERON:0003350,4.28e-09,9;UBERON:0004808,4.28e-09,9;UBERON:0001277,4.28e-09,9;UBERON:0000014,9.77e-08,5;UBERON:0001003,9.77e-08,5;UBERON:0002097,9.77e-08,5;UBERON:0002199,9.77e-08,5;UBERON:0007029,9.77e-08,5;UBERON:0007376,9.77e-08,5;UBERON:0002416,9.77e-08,5;UBERON:0007383,9.77e-08,5;UBERON:0000161,1.80e-07,5;UBERON:0000485,3.92e-07,11
|phase1_expression=0.160148847104794,2.79180326111489,4.54999239389536,3.0246421130683,2.00358291978539,1.51091344720701,3.03696432774183,0,0.563154888606667,0,0,0,0,0,0,0.202475267389826,0,0.473193248037357,0.137114433605739,0.84877930359606,0.17008658030214,0.0992909512008853,0,2.87986361028132,2.06468352960453,2.29692785646008,3.01533397311352,3.44753972297422,1.52018735565099,0.756090389279792,3.54768817048488,0,0,0,1.73310971850765,2.1610503896604,0.816677425049476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17447824240415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.561777680527007,0,0,0,0.563373679106722,0,0,0,6.061749148314,2.28023878927589,1.51657333504435,0.68510327831436,0.517875767294343,0,0,0,0,0,0,0,2.71914464507811,0,0,0,0,0,1.86391761218122,0,0,1.02182822083437,0,0,0.127070227073065,0,0,0,0,0,0,0,0.203678727700633,0.497627882440372,3.0326731012041,0.210441855886474,0,0,0.360124259610698,0.60281927134286,0.136072998302656,0,0,0,0.215567992932842,0.189106080167819,0.703804496655795,1.09597866213787,2.78047249225598,2.089512999133,3.2925141825271,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.63460661282178,2.11560453330835,0,0.232236671860439,0.515469845288373,0.605050573870028,0,1.52180500890047,2.84717436926707,0.988193728344065,1.50801125280162,1.59165177632921,1.36474860983384,0.898819408654221,1.51296634912286,2.78797782556114,0.758671603812327,0.114248512609729,1.1270773567308,0.203651327845314,0.775809948670503,0.210407459670956,0.569128834118316,0.147610147979602,0.31399745568275,0.123397163921801,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0.488894929326078,0.509235257325564,0.234690248288502,0.167506257441816,0.714130922658041,0.780534591431195,0.472905432318573,0.221464689648775,0,0.491589944147214,0.172684981865896,0.433947175744535,0,0,0.983528546038072,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0.162886959353576,0,0,0,1.51161778482376,0.377210159511796,0.295301892880773,0.307435147943927,0.516856586336442,0,0.356497378384721,0.316036757935816,0,1.03135543248187,0.340439605753788,0.540183282093931,0.646793418913773,0,0,0.178368817602071,0.164549020602121,0,3.98941903708308,5.50763384245932,1.7642271844397,3.79238381765404,2.58343082713449,1.93001359770099,3.22305328808468,3.77524069413641,1.1659233465194,0,0,0.206386867963223,0,0,0.136694227721025,0,0,0.279902904647316,0.138199973804424,3.81868247206045,0,1.01659733563424,1.62008011232702,1.25452977608681,2.83871332870031,0.944050424693745,1.07449492442937,3.14107130380836,2.85152941241944,3.10669656543463,0,0.149516546043979,0.827292452285488,0.194451188344048,0.387479470433193,0.337912250981556,0,0.2604087696879,0.314578033277133,0,0.288030006257865,0,2.8381530140623,1.43795340030758,1.16928740680016,0.179026695667481,0.198681354781265,0.721172697119813,0.295379054349154,0.605798699688886,0.457240839929999,0,0.194915761479505,0.673482891482306,0.116876902181569,2.49403421976732,4.43971906748129,2.87084341150322,5.20442310728643,2.70465431645067,0,0.36630324853453,7.71726164684637,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0.415149390336707,0.399024873401031,0.341467211508268,1.21553358534147,1.04806581313991,0.551530525350042,0.222246727801615,0.412070114477788,0.64183841918363,0.252697211763798,0.50695859978048,0.377252682772152,0.468207537349412,0.0640251524048693,0.17230640686684,0.952587382566147,0.231768651889711,0.192909220463705,0,0.294397840268795,0,0.177475806159338,0,0.436039249896986,0.188218760830661,0.0846146078916765,0,0,0.135804113845862,0.561142271657738,0.593175090620871,0.29551344712669,0,0.619747364743864,0.771626443924566,0.749431733813838,0,0.214871054048298,0.382576664137687,0,0.231867835620421
|short_description=p4@Sfn
}}

Revision as of 21:45, 4 August 2015

Short description:p4@Sfn
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Sfn_5end
Coexpression cluster:MCL_coexpression_mm9:1018
Association with transcript: 263bp_to_ENSMUST00000057311, NM_018754, uc008vdc.1_5end
EntrezGene:55948
Link to Zenbu:ZENBU


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CAGE Expression

Sample

p4@Sfn

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.79
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I64.55
CD326+ enterocyte, pool1.CNhs13542.11848-124I33.02
CD326+ enterocyte, pool2.CNhs13197.11849-124I42.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I83.04
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.56
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.47
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.17
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.88
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.06
GP2+ M cell, pool1.CNhs13228.11845-124H92.30
GP2+ M cell, pool2.CNhs13231.11846-124I13.02
GP2+ M cell, pool3.CNhs13240.11847-124I23.45
Ileum epithelium, pool1.CNhs13199.10252-104B91.52
Ileum epithelium, pool2.CNhs13232.10253-104C10.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C83.55
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.73
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F62.16
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.82
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G16.06
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.28
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.52
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.69
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A82.72
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H71.02
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.50
epididymis, adult.CNhs10490.58-23B23.03
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C60.14
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A81.10
forelimb, embryo E15.CNhs11007.437-20E72.78
forelimb, embryo E17.CNhs10598.1517-43C42.09
forelimb, embryo E18.CNhs11008.1520-43B53.29
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I33.63
intestine, adult.CNhs10496.178-9A32.12
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F71.52
intestine, neonate N00.CNhs11126.644-26D12.85
intestine, neonate N01.CNhs11192.1322-23E90.99
intestine, neonate N06.CNhs11102.688-20B81.51
intestine, neonate N07.CNhs11095.720-20F21.59
intestine, neonate N10.CNhs11098.755-23A51.36
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E31.51
intestine, neonate N30.CNhs11131.1384-42G12.79
kidney, embryo E14.CNhs10606.411-4I90.76
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.78
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.57
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C60.78
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F21.51
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.65
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I73.99
placenta, adult pregnant day17.CNhs10464.577-18G35.51
prostate, adult.CNhs10470.859-1F81.76
skin, adult.CNhs10492.30-1C33.79
skin, neonate N00.CNhs11124.650-25G42.58
skin, neonate N03.CNhs11215.662-22H31.93
skin, neonate N06.CNhs11097.693-20I53.22
skin, neonate N10.CNhs11108.762-6C43.78
small intestine, neonate N16.CNhs11114.790-21I11.17
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H63.82
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D41.62
stomach, embryo E17.CNhs11006.1035-18D51.25
stomach, embryo E18.CNhs10999.1286-20C62.84
stomach, neonate N03.CNhs11193.1340-24B80.94
stomach, neonate N07.CNhs11210.718-18A91.07
stomach, neonate N25.CNhs11104.1355-25E43.14
stomach, neonate N30.CNhs11134.1386-42I12.85
submandibular gland, adult.CNhs10469.59-29C13.11
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.83
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I42.84
thymus, embryo E15.CNhs11005.430-45I21.44
thymus, embryo E16.CNhs11002.456-26C51.17
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.72
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.61
thymus, neonate N07.CNhs11211.713-19D30.46
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.67
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B42.49
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H34.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F72.87
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G55.20
urinary bladder, adult.CNhs10481.879-12E42.70
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D57.72
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B11.05
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.06
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.08
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
gastrointestinal system6.01e-1847
intestine2.00e-1531
mucosa1.13e-1315
endoderm-derived structure2.73e-12118
endoderm2.73e-12118
presumptive endoderm2.73e-12118
organ component layer4.68e-1224
intestinal mucosa1.81e-1113
wall of intestine1.81e-1113
gastrointestinal system mucosa1.81e-1113
digestive system9.81e-11116
digestive tract9.81e-11116
primitive gut9.81e-11116
surface structure6.37e-1022
subdivision of digestive tract1.73e-09114
epithelium of mucosa4.28e-099
gastrointestinal system epithelium4.28e-099
intestinal epithelium4.28e-099
zone of skin9.77e-085
skin epidermis9.77e-085
skin of body9.77e-085
integument9.77e-085
surface9.77e-085
outer epithelium9.77e-085
integumental system9.77e-085
enveloping layer of ectoderm9.77e-085
orifice1.80e-075
simple columnar epithelium3.92e-0711
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