FFCP PHASE1:Mm9::chr2:24278519..24278530,-: Difference between revisions
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{{FFCP|EntrezGene=18510|HGNC=|MCL_coexpression_id=12|UniProt=|association_with_transcript=71bp_to_ENSMUST00000149860_5end|description=CAGE_peak_3_at_Pax8_5end|id=chr2:24278519..24278530,-|ontology_enrichment_celltype=CL:0002563!5.95e-09!9;CL:0002251!5.95e-09!9;CL:0000239!1.06e-07!6;CL:0000677!1.06e-07!6;CL:0000212!1.06e-07!6;CL:0000584!1.06e-07!6|ontology_enrichment_celltype_v019_2=CL:0000682,1.53e-11,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!5.06e-23!43;UBERON:0000344!2.18e-18!15;UBERON:0005409!1.36e-17!59;UBERON:0001242!2.53e-15!13;UBERON:0000060!2.53e-15!13;UBERON:0001262!2.53e-15!13;UBERON:0004786!2.53e-15!13;UBERON:0004923!7.46e-12!24;UBERON:0003350!5.95e-09!9;UBERON:0004808!5.95e-09!9;UBERON:0001277!5.95e-09!9;UBERON:0000485!4.25e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.36e-29,31;UBERON:0005409,1.33e-20,47;UBERON:0000344,6.03e-19,15;UBERON:0002108,3.73e-15,4;UBERON:0001242,1.25e-13,13;UBERON:0001262,1.25e-13,13;UBERON:0004786,1.25e-13,13;UBERON:0000331,9.21e-12,3;UBERON:0002116,9.21e-12,3;UBERON:0001204,9.21e-12,3;UBERON:0001168,9.21e-12,3;UBERON:0004923,2.55e-11,24;UBERON:0001155,3.35e-09,2;UBERON:0000059,3.35e-09,2;UBERON:0001007,1.78e-08,116;UBERON:0001555,1.78e-08,116;UBERON:0007026,1.78e-08,116;UBERON:0004119,2.85e-08,118;UBERON:0000925,2.85e-08,118;UBERON:0006595,2.85e-08,118;UBERON:0001962,4.92e-08,2;UBERON:0001961,4.92e-08,2;UBERON:0001744,4.92e-08,2|phase1_expression=0,2.79180326111489,0,3.32710632437513,2.50447864973174,0.839396359559449,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.23989391910769,1.37645568640302,1.72269589234506,2.15380998079537,2.80112602491656,6.08074942260396,2.52030129759931,1.10865255327652,0,0,0,0,0.664938581433969,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0.170430322578058,0.259786004602869,0,0,0,0,0,0,0,0,1.25602267690966,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,5.59175283654366,0,0,6.64188343542338,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.124406970610093,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.2342386214491,4.49565963328025,0,0,0,0.80673409849337,0.889512175379481,0.951128130562796,2.84717436926707,0.494096864172033,0.251335208800269,0.198956472041151,1.16978452271472,2.69645822596266,4.53889904736858,3.58454291857861,0,0,1.1270773567308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164140899745061,2.62332752966866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165306911450672,0,2.46268449254406,0,0,0.149516546043979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0.188626341386076,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0.0985044823755635,0,0.154936841185966,0,0,0.233931608445408,0.214871054048298,0,0,0|short_description=p3@Pax8}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:18510 | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=71bp_to_ENSMUST00000149860_5end | |||
|cluster_id=chr2:24278519..24278530,- | |||
|description=CAGE_peak_3_at_Pax8_5end | |||
|id=chr2:24278519..24278530,- | |||
|ontology_enrichment_celltype=CL:0002563!5.95e-09!9;CL:0002251!5.95e-09!9;CL:0000239!1.06e-07!6;CL:0000677!1.06e-07!6;CL:0000212!1.06e-07!6;CL:0000584!1.06e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,1.53e-11,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!5.06e-23!43;UBERON:0000344!2.18e-18!15;UBERON:0005409!1.36e-17!59;UBERON:0001242!2.53e-15!13;UBERON:0000060!2.53e-15!13;UBERON:0001262!2.53e-15!13;UBERON:0004786!2.53e-15!13;UBERON:0004923!7.46e-12!24;UBERON:0003350!5.95e-09!9;UBERON:0004808!5.95e-09!9;UBERON:0001277!5.95e-09!9;UBERON:0000485!4.25e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.36e-29,31;UBERON:0005409,1.33e-20,47;UBERON:0000344,6.03e-19,15;UBERON:0002108,3.73e-15,4;UBERON:0001242,1.25e-13,13;UBERON:0001262,1.25e-13,13;UBERON:0004786,1.25e-13,13;UBERON:0000331,9.21e-12,3;UBERON:0002116,9.21e-12,3;UBERON:0001204,9.21e-12,3;UBERON:0001168,9.21e-12,3;UBERON:0004923,2.55e-11,24;UBERON:0001155,3.35e-09,2;UBERON:0000059,3.35e-09,2;UBERON:0001007,1.78e-08,116;UBERON:0001555,1.78e-08,116;UBERON:0007026,1.78e-08,116;UBERON:0004119,2.85e-08,118;UBERON:0000925,2.85e-08,118;UBERON:0006595,2.85e-08,118;UBERON:0001962,4.92e-08,2;UBERON:0001961,4.92e-08,2;UBERON:0001744,4.92e-08,2 | |||
|phase1_expression=0,2.79180326111489,0,3.32710632437513,2.50447864973174,0.839396359559449,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.23989391910769,1.37645568640302,1.72269589234506,2.15380998079537,2.80112602491656,6.08074942260396,2.52030129759931,1.10865255327652,0,0,0,0,0.664938581433969,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0.170430322578058,0.259786004602869,0,0,0,0,0,0,0,0,1.25602267690966,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,5.59175283654366,0,0,6.64188343542338,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.124406970610093,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.2342386214491,4.49565963328025,0,0,0,0.80673409849337,0.889512175379481,0.951128130562796,2.84717436926707,0.494096864172033,0.251335208800269,0.198956472041151,1.16978452271472,2.69645822596266,4.53889904736858,3.58454291857861,0,0,1.1270773567308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164140899745061,2.62332752966866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165306911450672,0,2.46268449254406,0,0,0.149516546043979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0.188626341386076,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0.0985044823755635,0,0.154936841185966,0,0,0.233931608445408,0.214871054048298,0,0,0 | |||
|short_description=p3@Pax8 | |||
}} |
Revision as of 20:02, 4 August 2015
Short description: | p3@Pax8 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Pax8_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 71bp_to_ENSMUST00000149860_5end |
EntrezGene: | 18510 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 1.53e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 5.36e-29 | 31 |
gastrointestinal system | 1.33e-20 | 47 |
mucosa | 6.03e-19 | 15 |
small intestine | 3.73e-15 | 4 |
intestinal mucosa | 1.25e-13 | 13 |
wall of intestine | 1.25e-13 | 13 |
gastrointestinal system mucosa | 1.25e-13 | 13 |
ileal mucosa | 9.21e-12 | 3 |
ileum | 9.21e-12 | 3 |
mucosa of small intestine | 9.21e-12 | 3 |
wall of small intestine | 9.21e-12 | 3 |
organ component layer | 2.55e-11 | 24 |
colon | 3.35e-09 | 2 |
large intestine | 3.35e-09 | 2 |
digestive system | 1.78e-08 | 116 |
digestive tract | 1.78e-08 | 116 |
primitive gut | 1.78e-08 | 116 |
endoderm-derived structure | 2.85e-08 | 118 |
endoderm | 2.85e-08 | 118 |
presumptive endoderm | 2.85e-08 | 118 |
gut-associated lymphoid tissue | 4.92e-08 | 2 |
mucosa-associated lymphoid tissue | 4.92e-08 | 2 |
lymphoid tissue | 4.92e-08 | 2 |