FFCP PHASE1:Mm9::chr12:113858147..113858184,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:113858147..113858184,-|id=chr12:113858147..113858184,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002031,1.87e-07,25;CL:0000839,2.59e-07,13;CL:0002194,9.16e-07,4;CL:0000766,9.16e-07,4;CL:0000234,9.16e-07,4;CL:0000576,9.16e-07,4;CL:0000235,9.16e-07,4;CL:0000864,9.16e-07,4;CL:0002009,9.16e-07,4;CL:0000040,9.16e-07,4;CL:0000559,9.16e-07,4|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003081!4.08e-08!88;UBERON:0001474!8.89e-07!22;UBERON:0004765!8.89e-07!22;UBERON:0001434!8.89e-07!22|ontology_enrichment_uberon_v019_2=UBERON:0001474,9.38e-13,22;UBERON:0004765,9.38e-13,22;UBERON:0001434,9.38e-13,22;UBERON:0002204,1.80e-12,32;UBERON:0005418,1.13e-09,5;UBERON:0002472,1.13e-09,5;UBERON:0008784,1.13e-09,5;UBERON:0006058,1.13e-09,5;UBERON:0004709,1.13e-09,5;UBERON:0002529,1.13e-09,5;UBERON:0010538,1.13e-09,5;UBERON:0005420,1.13e-09,5;UBERON:0010758,1.13e-09,5;UBERON:0000978,1.13e-09,5;UBERON:0002103,1.13e-09,5;UBERON:0000376,1.13e-09,5;UBERON:0000154,1.13e-09,5;UBERON:0010709,1.13e-09,5;UBERON:0005730,1.13e-09,5;UBERON:0002371,4.83e-09,16;UBERON:0003081,2.43e-08,87;UBERON:0000981,8.55e-08,4;UBERON:0003608,8.55e-08,4;UBERON:0003826,8.55e-08,4;UBERON:0008202,8.55e-08,4;UBERON:0004381,8.55e-08,4;UBERON:0007273,8.55e-08,4;UBERON:0010912,8.55e-08,4;UBERON:0002513,8.55e-08,4;UBERON:0004375,8.55e-08,4;UBERON:0010740,8.55e-08,4;UBERON:0010363,8.55e-08,4;UBERON:0003860,8.55e-08,4;UBERON:0002428,8.55e-08,4;UBERON:0010742,8.55e-08,4;UBERON:0002495,8.55e-08,4;UBERON:0003464,8.55e-08,4;UBERON:0003606,8.55e-08,4;UBERON:0005893,8.55e-08,4;UBERON:0009749,8.55e-08,4;UBERON:0010712,8.55e-08,4;UBERON:0010886,8.55e-08,4;UBERON:0005254,8.55e-08,4;UBERON:0010885,8.55e-08,4;UBERON:0010881,8.55e-08,4;UBERON:0010882,8.55e-08,4;UBERON:0007844,8.55e-08,4;UBERON:0001441,8.55e-08,4;UBERON:0011249,8.55e-08,4;UBERON:0002091,8.55e-08,4;UBERON:0003285,8.55e-08,4;UBERON:0004288,8.55e-08,4;UBERON:0010129,8.55e-08,4;UBERON:0006234,8.55e-08,4|phase1_expression=0,0,0,0,0,0,0,0.516493293766305,0.281577444303333,1.17032263160997,0,0,0.342401459862411,0.0874204024189974,0.666219523631325,1.01237633694913,0,2.99689057090326,2.33094537129756,4.2438965179803,0.17008658030214,1.58865521921416,1.04479915655574,0.639969691173627,1.14704640533585,0,0,0,0,0,0,0,0.61506478758457,0,0,0,0,0.418531630736908,3.1253413780952,3.14114246384279,4.70585190424811,2.73218193983378,1.94204141212461,0,0,0,0,0,0,0,0,0,5.03347818173209,0,0,0,0,0,0,0,0,0,0,0,1.97773272513395,1.4209602298922,1.19840044207362,1.15265491596466,0.103689612308478,0,0,0,0.220868540951614,0,0,0,1.10115880999389,0.510749352340751,0.307213066512487,0,0,0,0.279182999001381,1.12552522006336,0.30559649555362,0,0.142371680799103,0.372798891650601,0,0,0.869593466105033,0,0,0,0,0.448026887097336,1.54488862144927,0,0,0,0.422530259330042,0,0,0,0,0,0,0.5709193985953,0.776813650941515,0.445326417194474,0,0,0,0,0.117588707135705,0.251333182659351,0,0.578397427679647,2.65383165584962,1.7794353494215,1.32504911076236,3.39412677194655,1.86391761218122,0.878342391034642,0.41889341362691,0,1.07833612055328,0.599902730993408,0.635351135365324,0.149790639404823,0.457500602818626,0,0.347648640384553,0.511430914660661,0.41557608911912,0.324482526135515,0,1.24406970610093,0.252722758433675,0.841767423545896,0,0.229902104433473,0.180062129805349,0.150704817835715,0.136072998302656,0,0.187403449119458,1.03481348295606,0,0,0.351902248327898,0,0,0,0.205782136407943,0,0.702213187313235,0.257347907114715,0,0.207125772535502,0.703578179943289,0.720248245844059,0.23674473558521,0.787056926989615,0.771335564436891,1.86027155800326,1.07309360559848,0.817357396570186,2.30383789878873,1.14917224855367,3.40489000092594,4.82459958503597,4.61055242111206,3.22095405024892,0.630869845692382,0,0,0,0,0,0,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0.379335801906163,0.114248512609729,0,0.203651327845314,0.193952487167626,0,0.189709611372772,0.147610147979602,0.156998727841375,0.616985819609003,0.592905254174298,0,0,0,0.202860121388503,0.241177159752417,0,0.287696137450811,0,0.274561413188081,0,0,0,1.01031551178845,0.896987067609561,0.964887042726734,0,0.189491411770485,0,0,0.234690248288502,0.167506257441816,0,0,0.472905432318573,0,0,0.327726629431476,0.172684981865896,0.723245292907558,1.50791283939272,1.08781136763742,0,0.551873492609465,0.481651769963376,0.468846746368813,0,5.80683132570058,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0,0,0,0.242780636154981,0,0.377210159511796,0.295301892880773,0,0,0,0.712994756769443,0.632073515871632,0,1.03135543248187,0.340439605753788,0,0.129358683782755,0.214337035031592,0,0,0,0,0.23467170806371,0.21183207086382,0,0.49465875882444,0,0.241251699712623,0.119372344003136,0,0,0.18542530201051,1.19609616558497,0.412773735926445,0.740778109478847,0.376736914009382,1.0935538217682,0.915112692826091,1.86976272993241,1.6794174278839,0.967399816630967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0.117357238645754,0,0,0,0,0.316011120628178,0.608175645870493,0.410843828659309,0.129920822977795,0,0.198681354781265,0.120195449519969,0.295379054349154,0.201932899896295,0.228620419965,0.100826185136841,0.292373642219257,0,0.467507608726276,7.25537227568676,0,0.179427713218951,0.335769232728157,0,0,0,0,0,0,0,0,0,0.685082519770642,0.755393897389701,0,0,0,1.03552062350364,0,0.399024873401031,0,0,0.209613162627982,0.367687016900028,0.666740183404846,0.206035057238894,0.320919209591815,0,0.760437899670719,0.188626341386076,0.655490552289177,0.384150914429216,0.34461281373368,0.952587382566147,0.347652977834566,0.77163688185482,0,0.441596760403192,1.02860775715625,0.70990322463735,0.715308569841963,0.145346416632329,0.846984423737976,0.592302255241736,0.73171189149109,1.05227884575137,0.679020569229309,0,0.711810108745045,0.689531376628944,0.409231043169689,0.619747364743864,0.385813221962283,0.249810577937946,0.935726433781634,0.644613162144895,1.3390183244819,2.64709702943419,3.01428186306548|short_description=p@chr12:113858147..113858184,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:113858147..113858184,- | |||
|description=CAGE_peak_at_chr12:113858147..113858184,- | |||
|id=chr12:113858147..113858184,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002031,1.87e-07,25;CL:0000839,2.59e-07,13;CL:0002194,9.16e-07,4;CL:0000766,9.16e-07,4;CL:0000234,9.16e-07,4;CL:0000576,9.16e-07,4;CL:0000235,9.16e-07,4;CL:0000864,9.16e-07,4;CL:0002009,9.16e-07,4;CL:0000040,9.16e-07,4;CL:0000559,9.16e-07,4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!4.08e-08!88;UBERON:0001474!8.89e-07!22;UBERON:0004765!8.89e-07!22;UBERON:0001434!8.89e-07!22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,9.38e-13,22;UBERON:0004765,9.38e-13,22;UBERON:0001434,9.38e-13,22;UBERON:0002204,1.80e-12,32;UBERON:0005418,1.13e-09,5;UBERON:0002472,1.13e-09,5;UBERON:0008784,1.13e-09,5;UBERON:0006058,1.13e-09,5;UBERON:0004709,1.13e-09,5;UBERON:0002529,1.13e-09,5;UBERON:0010538,1.13e-09,5;UBERON:0005420,1.13e-09,5;UBERON:0010758,1.13e-09,5;UBERON:0000978,1.13e-09,5;UBERON:0002103,1.13e-09,5;UBERON:0000376,1.13e-09,5;UBERON:0000154,1.13e-09,5;UBERON:0010709,1.13e-09,5;UBERON:0005730,1.13e-09,5;UBERON:0002371,4.83e-09,16;UBERON:0003081,2.43e-08,87;UBERON:0000981,8.55e-08,4;UBERON:0003608,8.55e-08,4;UBERON:0003826,8.55e-08,4;UBERON:0008202,8.55e-08,4;UBERON:0004381,8.55e-08,4;UBERON:0007273,8.55e-08,4;UBERON:0010912,8.55e-08,4;UBERON:0002513,8.55e-08,4;UBERON:0004375,8.55e-08,4;UBERON:0010740,8.55e-08,4;UBERON:0010363,8.55e-08,4;UBERON:0003860,8.55e-08,4;UBERON:0002428,8.55e-08,4;UBERON:0010742,8.55e-08,4;UBERON:0002495,8.55e-08,4;UBERON:0003464,8.55e-08,4;UBERON:0003606,8.55e-08,4;UBERON:0005893,8.55e-08,4;UBERON:0009749,8.55e-08,4;UBERON:0010712,8.55e-08,4;UBERON:0010886,8.55e-08,4;UBERON:0005254,8.55e-08,4;UBERON:0010885,8.55e-08,4;UBERON:0010881,8.55e-08,4;UBERON:0010882,8.55e-08,4;UBERON:0007844,8.55e-08,4;UBERON:0001441,8.55e-08,4;UBERON:0011249,8.55e-08,4;UBERON:0002091,8.55e-08,4;UBERON:0003285,8.55e-08,4;UBERON:0004288,8.55e-08,4;UBERON:0010129,8.55e-08,4;UBERON:0006234,8.55e-08,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0.516493293766305,0.281577444303333,1.17032263160997,0,0,0.342401459862411,0.0874204024189974,0.666219523631325,1.01237633694913,0,2.99689057090326,2.33094537129756,4.2438965179803,0.17008658030214,1.58865521921416,1.04479915655574,0.639969691173627,1.14704640533585,0,0,0,0,0,0,0,0.61506478758457,0,0,0,0,0.418531630736908,3.1253413780952,3.14114246384279,4.70585190424811,2.73218193983378,1.94204141212461,0,0,0,0,0,0,0,0,0,5.03347818173209,0,0,0,0,0,0,0,0,0,0,0,1.97773272513395,1.4209602298922,1.19840044207362,1.15265491596466,0.103689612308478,0,0,0,0.220868540951614,0,0,0,1.10115880999389,0.510749352340751,0.307213066512487,0,0,0,0.279182999001381,1.12552522006336,0.30559649555362,0,0.142371680799103,0.372798891650601,0,0,0.869593466105033,0,0,0,0,0.448026887097336,1.54488862144927,0,0,0,0.422530259330042,0,0,0,0,0,0,0.5709193985953,0.776813650941515,0.445326417194474,0,0,0,0,0.117588707135705,0.251333182659351,0,0.578397427679647,2.65383165584962,1.7794353494215,1.32504911076236,3.39412677194655,1.86391761218122,0.878342391034642,0.41889341362691,0,1.07833612055328,0.599902730993408,0.635351135365324,0.149790639404823,0.457500602818626,0,0.347648640384553,0.511430914660661,0.41557608911912,0.324482526135515,0,1.24406970610093,0.252722758433675,0.841767423545896,0,0.229902104433473,0.180062129805349,0.150704817835715,0.136072998302656,0,0.187403449119458,1.03481348295606,0,0,0.351902248327898,0,0,0,0.205782136407943,0,0.702213187313235,0.257347907114715,0,0.207125772535502,0.703578179943289,0.720248245844059,0.23674473558521,0.787056926989615,0.771335564436891,1.86027155800326,1.07309360559848,0.817357396570186,2.30383789878873,1.14917224855367,3.40489000092594,4.82459958503597,4.61055242111206,3.22095405024892,0.630869845692382,0,0,0,0,0,0,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0.379335801906163,0.114248512609729,0,0.203651327845314,0.193952487167626,0,0.189709611372772,0.147610147979602,0.156998727841375,0.616985819609003,0.592905254174298,0,0,0,0.202860121388503,0.241177159752417,0,0.287696137450811,0,0.274561413188081,0,0,0,1.01031551178845,0.896987067609561,0.964887042726734,0,0.189491411770485,0,0,0.234690248288502,0.167506257441816,0,0,0.472905432318573,0,0,0.327726629431476,0.172684981865896,0.723245292907558,1.50791283939272,1.08781136763742,0,0.551873492609465,0.481651769963376,0.468846746368813,0,5.80683132570058,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0,0,0,0.242780636154981,0,0.377210159511796,0.295301892880773,0,0,0,0.712994756769443,0.632073515871632,0,1.03135543248187,0.340439605753788,0,0.129358683782755,0.214337035031592,0,0,0,0,0.23467170806371,0.21183207086382,0,0.49465875882444,0,0.241251699712623,0.119372344003136,0,0,0.18542530201051,1.19609616558497,0.412773735926445,0.740778109478847,0.376736914009382,1.0935538217682,0.915112692826091,1.86976272993241,1.6794174278839,0.967399816630967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0.117357238645754,0,0,0,0,0.316011120628178,0.608175645870493,0.410843828659309,0.129920822977795,0,0.198681354781265,0.120195449519969,0.295379054349154,0.201932899896295,0.228620419965,0.100826185136841,0.292373642219257,0,0.467507608726276,7.25537227568676,0,0.179427713218951,0.335769232728157,0,0,0,0,0,0,0,0,0,0.685082519770642,0.755393897389701,0,0,0,1.03552062350364,0,0.399024873401031,0,0,0.209613162627982,0.367687016900028,0.666740183404846,0.206035057238894,0.320919209591815,0,0.760437899670719,0.188626341386076,0.655490552289177,0.384150914429216,0.34461281373368,0.952587382566147,0.347652977834566,0.77163688185482,0,0.441596760403192,1.02860775715625,0.70990322463735,0.715308569841963,0.145346416632329,0.846984423737976,0.592302255241736,0.73171189149109,1.05227884575137,0.679020569229309,0,0.711810108745045,0.689531376628944,0.409231043169689,0.619747364743864,0.385813221962283,0.249810577937946,0.935726433781634,0.644613162144895,1.3390183244819,2.64709702943419,3.01428186306548 | |||
|short_description=p@chr12:113858147..113858184,- | |||
}} |
Latest revision as of 18:56, 4 August 2015
Short description: | p@chr12:113858147..113858184, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:113858147..113858184, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic lineage restricted progenitor cell | 1.87e-07 | 25 |
myeloid lineage restricted progenitor cell | 2.59e-07 | 13 |
monopoietic cell | 9.16e-07 | 4 |
myeloid leukocyte | 9.16e-07 | 4 |
phagocyte | 9.16e-07 | 4 |
monocyte | 9.16e-07 | 4 |
macrophage | 9.16e-07 | 4 |
tissue-resident macrophage | 9.16e-07 | 4 |
macrophage dendritic cell progenitor | 9.16e-07 | 4 |
monoblast | 9.16e-07 | 4 |
promonocyte | 9.16e-07 | 4 |